RNA–Protein interactions for RNA: ENST00000428650.5

STRC-201, Transcript of stereocilin, humanhuman

TSL 5

Gene STRC, Length 5,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-201ENST00000428650 DSCC1Q9BVC3 393 aa16.18■□□□□ 0.18
STRC-201ENST00000428650 SWAP70Q9UH65 585 aa16.18■□□□□ 0.18
STRC-201ENST00000428650 KCNH3Q9ULD8 1083 aa16.18■□□□□ 0.18
STRC-201ENST00000428650 PUM3Q15397 648 aaKnown RBP16.18■□□□□ 0.18
STRC-201ENST00000428650 C19orf44Q9H6X5 657 aa16.18■□□□□ 0.18
STRC-201ENST00000428650 CEP83Q9Y592 693 aa16.18■□□□□ 0.18
STRC-201ENST00000428650 TOM1O60784 492 aa16.17■□□□□ 0.18
STRC-201ENST00000428650 RBSNQ9H1K0 784 aa16.17■□□□□ 0.18
STRC-201ENST00000428650 ARHGEF5Q12774 1597 aa16.17■□□□□ 0.18
STRC-201ENST00000428650 CALCOCO2Q13137 446 aa16.17■□□□□ 0.18
STRC-201ENST00000428650 CCDC122Q5T0U0 273 aa16.17■□□□□ 0.18
STRC-201ENST00000428650 APBB1IPQ7Z5R6 666 aaPredicted RBP16.17■□□□□ 0.18
STRC-201ENST00000428650 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.17■□□□□ 0.18
STRC-201ENST00000428650 MAP3K19Q56UN5 1328 aa16.17■□□□□ 0.18
STRC-201ENST00000428650 LDHBP07195 334 aaKnown RBP16.17■□□□□ 0.18
STRC-201ENST00000428650 SEL1L2Q5TEA6 688 aa16.17■□□□□ 0.18
STRC-201ENST00000428650 HAUS3Q68CZ6 603 aa16.17■□□□□ 0.18
STRC-201ENST00000428650 KBTBD3Q8NAB2 608 aa16.17■□□□□ 0.18
STRC-201ENST00000428650 SMC6Q96SB8 1091 aa16.17■□□□□ 0.18
STRC-201ENST00000428650 SAMD15Q9P1V8 674 aa16.17■□□□□ 0.18
STRC-201ENST00000428650 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.17■□□□□ 0.18
STRC-201ENST00000428650 EPB41P11171 864 aaKnown RBP16.16■□□□□ 0.18
STRC-201ENST00000428650 EVCP57679 992 aa16.16■□□□□ 0.18
STRC-201ENST00000428650 SLC39A6Q13433 755 aa16.16■□□□□ 0.18
STRC-201ENST00000428650 PABPN1LA6NDY0 278 aaKnown RBP16.16■□□□□ 0.18
STRC-201ENST00000428650 CCDC6Q16204 474 aa16.16■□□□□ 0.18
STRC-201ENST00000428650 CWF19L2Q2TBE0 894 aaKnown RBP16.16■□□□□ 0.18
STRC-201ENST00000428650 KIFAP3Q92845 792 aa16.16■□□□□ 0.18
STRC-201ENST00000428650 MCM9Q9NXL9 1143 aa16.16■□□□□ 0.18
STRC-201ENST00000428650 TNNQ9UQP3 1299 aa16.16■□□□□ 0.18
STRC-201ENST00000428650 IGSF22Q8N9C0 903 aa16.16■□□□□ 0.18
STRC-201ENST00000428650 LEO1Q8WVC0 666 aaPredicted RBP16.16■□□□□ 0.18
STRC-201ENST00000428650 MRVI1Q9Y6F6 885 aa16.16■□□□□ 0.18
STRC-201ENST00000428650 ABCC4O15439 1325 aa16.16■□□□□ 0.18
STRC-201ENST00000428650 MAST3O60307 1309 aa16.16■□□□□ 0.18
STRC-201ENST00000428650 IBTKQ9P2D0 1353 aaPredicted RBP16.16■□□□□ 0.18
STRC-201ENST00000428650 MCM7P33993 719 aa16.15■□□□□ 0.18
STRC-201ENST00000428650 VPS18Q9P253 973 aa16.15■□□□□ 0.18
STRC-201ENST00000428650 DKC1O60832 514 aaKnown RBP eCLIP16.15■□□□□ 0.18
STRC-201ENST00000428650 GIGYF1O75420 1035 aaPredicted RBP16.15■□□□□ 0.18
STRC-201ENST00000428650 SEC24BO95487 1268 aa16.15■□□□□ 0.18
STRC-201ENST00000428650 SETDB1Q15047 1291 aa16.15■□□□□ 0.18
STRC-201ENST00000428650 TICAM2Q86XR7 235 aa16.15■□□□□ 0.18
STRC-201ENST00000428650 GPR161Q8N6U8 529 aaKnown RBP16.15■□□□□ 0.18
STRC-201ENST00000428650 NFATC2IPQ8NCF5 419 aa16.15■□□□□ 0.18
STRC-201ENST00000428650 TRIM35Q9UPQ4 493 aa16.15■□□□□ 0.18
STRC-201ENST00000428650 PTPRTO14522 1441 aa16.15■□□□□ 0.18
STRC-201ENST00000428650 GCP02774 474 aa16.15■□□□□ 0.18
STRC-201ENST00000428650 FANCCQ00597 558 aa16.15■□□□□ 0.18
STRC-201ENST00000428650 CALUO43852 315 aaPredicted RBP16.15■□□□□ 0.18
STRC-201ENST00000428650 BRD1O95696 1058 aa16.15■□□□□ 0.18
STRC-201ENST00000428650 GRIPAP1Q4V328 841 aa16.15■□□□□ 0.18
STRC-201ENST00000428650 FRMD4BQ9Y2L6 1034 aa16.15■□□□□ 0.18
STRC-201ENST00000428650 SYNRGQ9UMZ2 1314 aa16.14■□□□□ 0.18
STRC-201ENST00000428650 ACTN4O43707 911 aaKnown RBP16.14■□□□□ 0.18
STRC-201ENST00000428650 CCDC14Q49A88 953 aa16.14■□□□□ 0.18
STRC-201ENST00000428650 TTC31Q49AM3 519 aaPredicted RBP16.14■□□□□ 0.18
STRC-201ENST00000428650 KRT25Q7Z3Z0 450 aa16.14■□□□□ 0.18
STRC-201ENST00000428650 POTEDQ86YR6 584 aa16.14■□□□□ 0.18
STRC-201ENST00000428650 LZTFL1Q9NQ48 299 aa16.14■□□□□ 0.18
STRC-201ENST00000428650 ZRANB1Q9UGI0 708 aa16.14■□□□□ 0.18
STRC-201ENST00000428650 GTF2A1P52655 376 aaPredicted RBP16.14■□□□□ 0.17
STRC-201ENST00000428650 MCTP2Q6DN12 878 aa16.14■□□□□ 0.17
STRC-201ENST00000428650 NOC4LQ9BVI4 516 aaKnown RBP16.14■□□□□ 0.17
STRC-201ENST00000428650 CHRNA2Q15822 529 aa16.14■□□□□ 0.17
STRC-201ENST00000428650 OGFOD1Q8N543 542 aa16.14■□□□□ 0.17
STRC-201ENST00000428650 JARID2Q92833 1246 aaPredicted RBP16.14■□□□□ 0.17
STRC-201ENST00000428650 IFT74Q96LB3 600 aa16.14■□□□□ 0.17
STRC-201ENST00000428650 FAM135BQ49AJ0 1406 aa16.14■□□□□ 0.17
STRC-201ENST00000428650 SAMD9Q5K651 1589 aa16.14■□□□□ 0.17
STRC-201ENST00000428650 PDE8AO60658 829 aa16.14■□□□□ 0.17
STRC-201ENST00000428650 TNNI2P48788 182 aa16.14■□□□□ 0.17
STRC-201ENST00000428650 PAK1Q13153 545 aa16.14■□□□□ 0.17
STRC-201ENST00000428650 KARSQ15046 597 aaKnown RBP16.14■□□□□ 0.17
STRC-201ENST00000428650 DDB1Q16531 1140 aa16.14■□□□□ 0.17
STRC-201ENST00000428650 CPLX4Q7Z7G2 160 aa16.14■□□□□ 0.17
STRC-201ENST00000428650 IFT20Q8IY31 132 aa16.14■□□□□ 0.17
STRC-201ENST00000428650 AFAP1L1Q8TED9 768 aa16.14■□□□□ 0.17
STRC-201ENST00000428650 LMBRD1Q9NUN5 540 aa16.14■□□□□ 0.17
STRC-201ENST00000428650 PODXL2Q9NZ53 605 aa16.14■□□□□ 0.17
STRC-201ENST00000428650 A0A1B0GUL7 405 aa16.13■□□□□ 0.17
STRC-201ENST00000428650 MBD4O95243 580 aa16.13■□□□□ 0.17
STRC-201ENST00000428650 GSTA5Q7RTV2 222 aa16.13■□□□□ 0.17
STRC-201ENST00000428650 DRC1Q96MC2 740 aa16.13■□□□□ 0.17
STRC-201ENST00000428650 NCBP1Q09161 790 aaKnown RBP16.13■□□□□ 0.17
STRC-201ENST00000428650 ZNF790Q6PG37 636 aa16.13■□□□□ 0.17
STRC-201ENST00000428650 CCDC50Q8IVM0 306 aa16.13■□□□□ 0.17
STRC-201ENST00000428650 CBX8Q9HC52 389 aa16.13■□□□□ 0.17
STRC-201ENST00000428650 ATP6V0A2Q9Y487 856 aa16.13■□□□□ 0.17
STRC-201ENST00000428650 A0A1B0GVL5 298 aa16.13■□□□□ 0.17
STRC-201ENST00000428650 TBC1D8BQ0IIM8 1120 aa16.13■□□□□ 0.17
STRC-201ENST00000428650 ZHX1Q9UKY1 873 aaPredicted RBP16.13■□□□□ 0.17
STRC-201ENST00000428650 SSX2IPQ9Y2D8 614 aa16.13■□□□□ 0.17
STRC-201ENST00000428650 CHMP4BP1P59074 171 aa16.13■□□□□ 0.17
STRC-201ENST00000428650 RUFY4Q6ZNE9 571 aa16.13■□□□□ 0.17
STRC-201ENST00000428650 MROH5Q6ZUA9 1318 aa16.12■□□□□ 0.17
STRC-201ENST00000428650 ATP5JP18859 108 aa16.12■□□□□ 0.17
STRC-201ENST00000428650 EXOC7Q9UPT5 735 aa16.12■□□□□ 0.17
STRC-201ENST00000428650 ZNF274Q96GC6 653 aaPredicted RBP16.12■□□□□ 0.17
STRC-201ENST00000428650 NOX5Q96PH1 765 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms