RNA–Protein interactions for RNA: ENST00000427123.5

SNX17-202, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 2,007 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-202ENST00000427123 SNW1Q13573 536 aaKnown RBP22.43■■□□□ 1.18
SNX17-202ENST00000427123 TMEM67Q5HYA8 995 aa22.43■■□□□ 1.18
SNX17-202ENST00000427123 AKNAD1Q5T1N1 836 aa22.43■■□□□ 1.18
SNX17-202ENST00000427123 LCORLQ8N3X6 602 aa22.43■■□□□ 1.18
SNX17-202ENST00000427123 FSIP1Q8NA03 581 aa22.43■■□□□ 1.18
SNX17-202ENST00000427123 ENGASEQ8NFI3 743 aa22.43■■□□□ 1.18
SNX17-202ENST00000427123 KCNG4Q8TDN1 519 aa22.43■■□□□ 1.18
SNX17-202ENST00000427123 LRP2BPQ9P2M1 347 aa22.43■■□□□ 1.18
SNX17-202ENST00000427123 TOM1O60784 492 aa22.42■■□□□ 1.18
SNX17-202ENST00000427123 KIF23Q02241 960 aaPredicted RBP22.42■■□□□ 1.18
SNX17-202ENST00000427123 MYSM1Q5VVJ2 828 aa22.42■■□□□ 1.18
SNX17-202ENST00000427123 NFXL1Q6ZNB6 911 aa22.42■■□□□ 1.18
SNX17-202ENST00000427123 LINC00301Q8NCQ3 95 aa22.42■■□□□ 1.18
SNX17-202ENST00000427123 TDRD7Q8NHU6 1098 aaKnown RBP22.42■■□□□ 1.18
SNX17-202ENST00000427123 MRPS27Q92552 414 aaKnown RBP22.42■■□□□ 1.18
SNX17-202ENST00000427123 GNL3LQ9NVN8 582 aaKnown RBP22.42■■□□□ 1.18
SNX17-202ENST00000427123 SLC4A4Q9Y6R1 1079 aa22.42■■□□□ 1.18
SNX17-202ENST00000427123 NID2Q14112 1375 aa22.42■■□□□ 1.18
SNX17-202ENST00000427123 TPM3P06753 285 aa22.41■■□□□ 1.18
SNX17-202ENST00000427123 TDO2P48775 406 aa22.41■■□□□ 1.18
SNX17-202ENST00000427123 PIP4K2BP78356 416 aa22.41■■□□□ 1.18
SNX17-202ENST00000427123 CTDSPL2Q05D32 466 aa22.41■■□□□ 1.18
SNX17-202ENST00000427123 STK38Q15208 465 aa22.41■■□□□ 1.18
SNX17-202ENST00000427123 VPS72Q15906 364 aa22.41■■□□□ 1.18
SNX17-202ENST00000427123 ADALQ6DHV7 355 aa22.41■■□□□ 1.18
SNX17-202ENST00000427123 PCDHA7Q9UN72 937 aa22.41■■□□□ 1.18
SNX17-202ENST00000427123 UBE4AQ14139 1066 aa22.41■■□□□ 1.18
SNX17-202ENST00000427123 MFSD6Q6ZSS7 791 aa22.41■■□□□ 1.18
SNX17-202ENST00000427123 MICU3Q86XE3 530 aa22.41■■□□□ 1.18
SNX17-202ENST00000427123 STAG1Q8WVM7 1258 aa22.41■■□□□ 1.18
SNX17-202ENST00000427123 ALG1Q9BT22 464 aa22.41■■□□□ 1.18
SNX17-202ENST00000427123 BSDC1Q9NW68 430 aaPredicted RBP22.41■■□□□ 1.18
SNX17-202ENST00000427123 GOLGA8AA7E2F4 631 aa22.4■■□□□ 1.18
SNX17-202ENST00000427123 SENP2Q9HC62 589 aa22.4■■□□□ 1.18
SNX17-202ENST00000427123 CLIC4Q9Y696 253 aa22.4■■□□□ 1.18
SNX17-202ENST00000427123 TAF1P21675 1872 aa22.4■■□□□ 1.18
SNX17-202ENST00000427123 GOLGA6L6A8MZA4 724 aa22.4■■□□□ 1.18
SNX17-202ENST00000427123 KIF28PB7ZC32 967 aa22.4■■□□□ 1.18
SNX17-202ENST00000427123 PRKAB2O43741 272 aa22.4■■□□□ 1.18
SNX17-202ENST00000427123 POLR3DP05423 398 aaPredicted RBP22.4■■□□□ 1.18
SNX17-202ENST00000427123 ZNF165P49910 485 aa22.4■■□□□ 1.18
SNX17-202ENST00000427123 STX1AQ16623 288 aa22.4■■□□□ 1.18
SNX17-202ENST00000427123 C3orf67Q6ZVT6 689 aa22.4■■□□□ 1.18
SNX17-202ENST00000427123 DNAJC25Q9H1X3 360 aa22.4■■□□□ 1.18
SNX17-202ENST00000427123 ZSWIM5Q9P217 1185 aa22.4■■□□□ 1.18
SNX17-202ENST00000427123 BTAF1O14981 1849 aa22.39■■□□□ 1.18
SNX17-202ENST00000427123 STK36Q9NRP7 1315 aa22.39■■□□□ 1.18
SNX17-202ENST00000427123 NHSQ6T4R5 1651 aa22.39■■□□□ 1.18
SNX17-202ENST00000427123 COL1A1P02452 1464 aaPredicted RBP22.39■■□□□ 1.17
SNX17-202ENST00000427123 IFIT3O14879 490 aaKnown RBP22.39■■□□□ 1.17
SNX17-202ENST00000427123 TPM2P07951 284 aa22.39■■□□□ 1.17
SNX17-202ENST00000427123 CDC27P30260 824 aa22.39■■□□□ 1.17
SNX17-202ENST00000427123 SF3A1Q15459 793 aaKnown RBP22.39■■□□□ 1.17
SNX17-202ENST00000427123 SYNE3Q6ZMZ3 975 aa22.39■■□□□ 1.17
SNX17-202ENST00000427123 CACNA1SQ13698 1873 aa22.38■■□□□ 1.17
SNX17-202ENST00000427123 CCDC69A6NI79 296 aa22.38■■□□□ 1.17
SNX17-202ENST00000427123 RXRAP19793 462 aa22.38■■□□□ 1.17
SNX17-202ENST00000427123 TERF1P54274 439 aa22.38■■□□□ 1.17
SNX17-202ENST00000427123 SLC10A5Q5PT55 438 aa22.38■■□□□ 1.17
SNX17-202ENST00000427123 MTA3Q9BTC8 594 aa22.38■■□□□ 1.17
SNX17-202ENST00000427123 GJB4Q9NTQ9 266 aa22.38■■□□□ 1.17
SNX17-202ENST00000427123 SLC12A7Q9Y666 1083 aa22.38■■□□□ 1.17
SNX17-202ENST00000427123 TACC3Q9Y6A5 838 aa22.38■■□□□ 1.17
SNX17-202ENST00000427123 SPTLC2O15270 562 aa22.38■■□□□ 1.17
SNX17-202ENST00000427123 CYP7A1P22680 504 aa22.38■■□□□ 1.17
SNX17-202ENST00000427123 NTRK3Q16288 839 aa22.38■■□□□ 1.17
SNX17-202ENST00000427123 FMR1NBQ8N0W7 255 aaPredicted RBP22.38■■□□□ 1.17
SNX17-202ENST00000427123 MIGA1Q8NAN2 632 aa22.38■■□□□ 1.17
SNX17-202ENST00000427123 RNF41Q9H4P4 317 aaPredicted RBP22.38■■□□□ 1.17
SNX17-202ENST00000427123 INCENPQ9NQS7 918 aa22.38■■□□□ 1.17
SNX17-202ENST00000427123 IARSP41252 1262 aaKnown RBP22.37■■□□□ 1.17
SNX17-202ENST00000427123 SART3Q15020 963 aaKnown RBP22.37■■□□□ 1.17
SNX17-202ENST00000427123 RC3H1Q5TC82 1133 aaKnown RBP22.37■■□□□ 1.17
SNX17-202ENST00000427123 ANO1Q5XXA6 986 aa22.37■■□□□ 1.17
SNX17-202ENST00000427123 MPNDQ8N594 471 aa22.37■■□□□ 1.17
SNX17-202ENST00000427123 PIBF1Q8WXW3 757 aa22.37■■□□□ 1.17
SNX17-202ENST00000427123 TTC12Q9H892 705 aaPredicted RBP22.37■■□□□ 1.17
SNX17-202ENST00000427123 GYG1P46976 350 aa22.36■■□□□ 1.17
SNX17-202ENST00000427123 CAVIN4Q5BKX8 364 aa22.36■■□□□ 1.17
SNX17-202ENST00000427123 KRT40Q6A162 431 aa22.36■■□□□ 1.17
SNX17-202ENST00000427123 ZNF830Q96NB3 372 aaPredicted RBP22.36■■□□□ 1.17
SNX17-202ENST00000427123 NYXQ9GZU5 481 aa22.36■■□□□ 1.17
SNX17-202ENST00000427123 FAM217BQ9NTX9 383 aaPredicted RBP22.36■■□□□ 1.17
SNX17-202ENST00000427123 MYH13Q9UKX3 1938 aa22.36■■□□□ 1.17
SNX17-202ENST00000427123 TBC1D9BQ66K14 1250 aa22.36■■□□□ 1.17
SNX17-202ENST00000427123 PHKBQ93100 1093 aa22.36■■□□□ 1.17
SNX17-202ENST00000427123 AIFM3Q96NN9 605 aa22.36■■□□□ 1.17
SNX17-202ENST00000427123 BCL2L12Q9HB09 334 aa22.36■■□□□ 1.17
SNX17-202ENST00000427123 MINPP1Q9UNW1 487 aa22.36■■□□□ 1.17
SNX17-202ENST00000427123 IQSEC3Q9UPP2 1182 aaPredicted RBP22.36■■□□□ 1.17
SNX17-202ENST00000427123 THSD7AQ9UPZ6 1657 aa22.35■■□□□ 1.17
SNX17-202ENST00000427123 MAGEB6P1A0A0J9YX57 407 aa22.35■■□□□ 1.17
SNX17-202ENST00000427123 RANBP6O60518 1105 aaKnown RBP22.35■■□□□ 1.17
SNX17-202ENST00000427123 GTF2E1P29083 439 aaPredicted RBP22.35■■□□□ 1.17
SNX17-202ENST00000427123 TRIM29Q14134 588 aa22.35■■□□□ 1.17
SNX17-202ENST00000427123 VPS37DQ86XT2 251 aa22.35■■□□□ 1.17
SNX17-202ENST00000427123 CCDC144CPQ8IYA2 1237 aa22.35■■□□□ 1.17
SNX17-202ENST00000427123 NGLY1Q96IV0 654 aa22.35■■□□□ 1.17
SNX17-202ENST00000427123 C8orf37Q96NL8 207 aa22.35■■□□□ 1.17
SNX17-202ENST00000427123 RAI14Q9P0K7 980 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms