RNA–Protein interactions for RNA: ENST00000426509.1

LINC00407-201, long intergenic non-protein coding RNA 407, humanhuman

TSL 5 BASIC

Gene LINC00407, Length 295 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00407-201ENST00000426509 COL18A1P39060 1754 aa3.35□□□□□ -1.87
LINC00407-201ENST00000426509 C5P01031 1676 aa3.34□□□□□ -1.87
LINC00407-201ENST00000426509 A0A1W2PRU2 124 aa3.34□□□□□ -1.87
LINC00407-201ENST00000426509 ERC2O15083 957 aa3.34□□□□□ -1.87
LINC00407-201ENST00000426509 RNMTO43148 476 aaKnown RBP3.34□□□□□ -1.87
LINC00407-201ENST00000426509 EIF5BO60841 1220 aaKnown RBP3.34□□□□□ -1.87
LINC00407-201ENST00000426509 CYP2E1P05181 493 aaPredicted RBP3.34□□□□□ -1.87
LINC00407-201ENST00000426509 HSP90AB1P08238 724 aaKnown RBP3.34□□□□□ -1.87
LINC00407-201ENST00000426509 MX1P20591 662 aa3.34□□□□□ -1.87
LINC00407-201ENST00000426509 SOX11P35716 441 aa3.34□□□□□ -1.87
LINC00407-201ENST00000426509 KCNQ4P56696 695 aa3.34□□□□□ -1.87
LINC00407-201ENST00000426509 KRT76Q01546 638 aa3.34□□□□□ -1.87
LINC00407-201ENST00000426509 PSME1Q06323 249 aa3.34□□□□□ -1.87
LINC00407-201ENST00000426509 PLEKHO1Q53GL0 409 aaPredicted RBP3.34□□□□□ -1.87
LINC00407-201ENST00000426509 AKAP4Q5JQC9 854 aa3.34□□□□□ -1.87
LINC00407-201ENST00000426509 BEND3Q5T5X7 828 aa3.34□□□□□ -1.87
LINC00407-201ENST00000426509 RNF20Q5VTR2 975 aa3.34□□□□□ -1.87
LINC00407-201ENST00000426509 ZNF530Q6P9A1 599 aaPredicted RBP3.34□□□□□ -1.87
LINC00407-201ENST00000426509 CLEC17AQ6ZS10 378 aa3.34□□□□□ -1.87
LINC00407-201ENST00000426509 CCDC155Q8N6L0 562 aa3.34□□□□□ -1.87
LINC00407-201ENST00000426509 KCNH5Q8NCM2 988 aa3.34□□□□□ -1.87
LINC00407-201ENST00000426509 SSH3Q8TE77 659 aa3.34□□□□□ -1.87
LINC00407-201ENST00000426509 IL17RAQ96F46 866 aa3.34□□□□□ -1.87
LINC00407-201ENST00000426509 CCDC97Q96F63 343 aaPredicted RBP3.34□□□□□ -1.87
LINC00407-201ENST00000426509 GRIP2Q9C0E4 1043 aa3.34□□□□□ -1.87
LINC00407-201ENST00000426509 PHAXQ9H814 394 aaKnown RBP3.34□□□□□ -1.87
LINC00407-201ENST00000426509 POLMQ9NP87 494 aaPredicted RBP3.34□□□□□ -1.87
LINC00407-201ENST00000426509 CHPF2Q9P2E5 772 aa3.34□□□□□ -1.87
LINC00407-201ENST00000426509 PCDHB11Q9Y5F2 797 aa3.34□□□□□ -1.87
LINC00407-201ENST00000426509 HRH3Q9Y5N1 445 aa3.34□□□□□ -1.87
LINC00407-201ENST00000426509 KDM6AO15550 1401 aaPredicted RBP3.34□□□□□ -1.88
LINC00407-201ENST00000426509 MRC1P22897 1456 aa3.34□□□□□ -1.88
LINC00407-201ENST00000426509 MEGF6O75095 1541 aa3.34□□□□□ -1.88
LINC00407-201ENST00000426509 COL14A1Q05707 1796 aaKnown RBP3.33□□□□□ -1.88
LINC00407-201ENST00000426509 RGPD5Q99666 1765 aa3.33□□□□□ -1.88
LINC00407-201ENST00000426509 PRAMEF22A3QJZ6 481 aa3.33□□□□□ -1.88
LINC00407-201ENST00000426509 PALM3A6NDB9 673 aaPredicted RBP3.33□□□□□ -1.88
LINC00407-201ENST00000426509 ATP5J2-PTCD1G3V325 749 aa3.33□□□□□ -1.88
LINC00407-201ENST00000426509 GRIN3BO60391 1043 aa3.33□□□□□ -1.88
LINC00407-201ENST00000426509 TOMM70O94826 608 aa3.33□□□□□ -1.88
LINC00407-201ENST00000426509 REC8O95072 547 aa3.33□□□□□ -1.88
LINC00407-201ENST00000426509 BAG4O95429 457 aaKnown RBP3.33□□□□□ -1.88
LINC00407-201ENST00000426509 GCP02774 474 aa3.33□□□□□ -1.88
LINC00407-201ENST00000426509 ANXA1P04083 346 aa3.33□□□□□ -1.88
LINC00407-201ENST00000426509 UBTFL1P0CB47 393 aaPredicted RBP3.33□□□□□ -1.88
LINC00407-201ENST00000426509 XRCC6P12956 609 aaKnown RBP eCLIP3.33□□□□□ -1.88
LINC00407-201ENST00000426509 EIF2S2P20042 333 aaKnown RBP3.33□□□□□ -1.88
LINC00407-201ENST00000426509 CHMLP26374 656 aa3.33□□□□□ -1.88
LINC00407-201ENST00000426509 MTX1Q13505 466 aa3.33□□□□□ -1.88
LINC00407-201ENST00000426509 PROSER3Q2NL68 480 aa3.33□□□□□ -1.88
LINC00407-201ENST00000426509 AMOTQ4VCS5 1084 aa3.33□□□□□ -1.88
LINC00407-201ENST00000426509 L1TD1Q5T7N2 865 aaKnown RBP3.33□□□□□ -1.88
LINC00407-201ENST00000426509 MPRIPQ6WCQ1 1025 aa3.33□□□□□ -1.88
LINC00407-201ENST00000426509 PPP1R42Q7Z4L9 355 aa3.33□□□□□ -1.88
LINC00407-201ENST00000426509 RNF135Q8IUD6 432 aa3.33□□□□□ -1.88
LINC00407-201ENST00000426509 DEPDC4Q8N2C3 294 aa3.33□□□□□ -1.88
LINC00407-201ENST00000426509 PI4K2BQ8TCG2 481 aa3.33□□□□□ -1.88
LINC00407-201ENST00000426509 ANKRD24Q8TF21 1146 aa3.33□□□□□ -1.88
LINC00407-201ENST00000426509 DNAAF4Q8WXU2 420 aa3.33□□□□□ -1.88
LINC00407-201ENST00000426509 NANOS1Q8WY41 292 aaKnown RBP3.33□□□□□ -1.88
LINC00407-201ENST00000426509 ESYT1Q9BSJ8 1104 aa3.33□□□□□ -1.88
LINC00407-201ENST00000426509 PPP1R12CQ9BZL4 782 aa3.33□□□□□ -1.88
LINC00407-201ENST00000426509 LRRCC1Q9C099 1032 aa3.33□□□□□ -1.88
LINC00407-201ENST00000426509 SRCIN1Q9C0H9 1055 aa3.33□□□□□ -1.88
LINC00407-201ENST00000426509 IL25Q9H293 177 aa3.33□□□□□ -1.88
LINC00407-201ENST00000426509 CUEDC1Q9NWM3 386 aaPredicted RBP3.33□□□□□ -1.88
LINC00407-201ENST00000426509 PALD1Q9ULE6 856 aa3.33□□□□□ -1.88
LINC00407-201ENST00000426509 ZDHHC9Q9Y397 364 aa3.33□□□□□ -1.88
LINC00407-201ENST00000426509 PNPLA7Q6ZV29 1317 aa3.33□□□□□ -1.88
LINC00407-201ENST00000426509 USP42Q9H9J4 1324 aaKnown RBP3.33□□□□□ -1.88
LINC00407-201ENST00000426509 PKD1L3Q7Z443 1732 aa3.33□□□□□ -1.88
LINC00407-201ENST00000426509 SCN11AQ9UI33 1791 aa3.33□□□□□ -1.88
LINC00407-201ENST00000426509 CHD4Q14839 1912 aa3.32□□□□□ -1.88
LINC00407-201ENST00000426509 ZBTB7CA1YPR0 619 aa3.32□□□□□ -1.88
LINC00407-201ENST00000426509 PI4KAP2A4QPH2 592 aa3.32□□□□□ -1.88
LINC00407-201ENST00000426509 USP17L3A6NCW0 530 aa3.32□□□□□ -1.88
LINC00407-201ENST00000426509 USP17L4A6NCW7 530 aa3.32□□□□□ -1.88
LINC00407-201ENST00000426509 GOLGA6L3A6NEY3 463 aa3.32□□□□□ -1.88
LINC00407-201ENST00000426509 BTBD11A6QL63 1104 aa3.32□□□□□ -1.88
LINC00407-201ENST00000426509 USP17L5A8MUK1 530 aa3.32□□□□□ -1.88
LINC00407-201ENST00000426509 MEN1O00255 615 aa3.32□□□□□ -1.88
LINC00407-201ENST00000426509 EPB41L2O43491 1005 aaKnown RBP3.32□□□□□ -1.88
LINC00407-201ENST00000426509 ATP9BO43861 1147 aa3.32□□□□□ -1.88
LINC00407-201ENST00000426509 RAB11FIP3O75154 756 aa3.32□□□□□ -1.88
LINC00407-201ENST00000426509 ALDH1L1O75891 902 aa3.32□□□□□ -1.88
LINC00407-201ENST00000426509 STAU1O95793 577 aaKnown RBP3.32□□□□□ -1.88
LINC00407-201ENST00000426509 IL2RAP01589 272 aa3.32□□□□□ -1.88
LINC00407-201ENST00000426509 NBPF7P0C2Y1 421 aaPredicted RBP3.32□□□□□ -1.88
LINC00407-201ENST00000426509 SKIP12755 728 aa3.32□□□□□ -1.88
LINC00407-201ENST00000426509 RHOQP17081 205 aa3.32□□□□□ -1.88
LINC00407-201ENST00000426509 ITGA6P23229 1130 aa3.32□□□□□ -1.88
LINC00407-201ENST00000426509 EVA1CP58658 441 aa3.32□□□□□ -1.88
LINC00407-201ENST00000426509 TEFQ10587 303 aa3.32□□□□□ -1.88
LINC00407-201ENST00000426509 CLN3Q13286 438 aa3.32□□□□□ -1.88
LINC00407-201ENST00000426509 CUL4AQ13619 759 aa3.32□□□□□ -1.88
LINC00407-201ENST00000426509 PKP1Q13835 747 aa3.32□□□□□ -1.88
LINC00407-201ENST00000426509 SLFNL1Q499Z3 407 aa3.32□□□□□ -1.88
LINC00407-201ENST00000426509 MSL1Q68DK7 614 aa3.32□□□□□ -1.88
LINC00407-201ENST00000426509 USP17L2Q6R6M4 530 aa3.32□□□□□ -1.88
LINC00407-201ENST00000426509 CASC1Q6TDU7 716 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms