RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 TDRD3Q9H7E2 651 aaKnown RBP18.78■□□□□ 0.6
SHOX2-202ENST00000425436 DAGLAQ9Y4D2 1042 aa18.78■□□□□ 0.6
SHOX2-202ENST00000425436 DOCK2Q92608 1830 aa18.77■□□□□ 0.6
SHOX2-202ENST00000425436 CLRN2A0PK11 232 aa18.77■□□□□ 0.6
SHOX2-202ENST00000425436 SLC9C2Q5TAH2 1124 aa18.77■□□□□ 0.6
SHOX2-202ENST00000425436 ANGEL2Q5VTE6 544 aaKnown RBP18.77■□□□□ 0.6
SHOX2-202ENST00000425436 ADGRA1Q86SQ6 560 aa18.77■□□□□ 0.6
SHOX2-202ENST00000425436 LDHDQ86WU2 507 aa18.77■□□□□ 0.6
SHOX2-202ENST00000425436 HSCBQ8IWL3 235 aa18.77■□□□□ 0.6
SHOX2-202ENST00000425436 CNTROBQ8N137 903 aa18.77■□□□□ 0.6
SHOX2-202ENST00000425436 USP26Q9BXU7 913 aa18.77■□□□□ 0.6
SHOX2-202ENST00000425436 TBC1D2Q9BYX2 928 aa18.77■□□□□ 0.6
SHOX2-202ENST00000425436 CYP7A1P22680 504 aa18.76■□□□□ 0.59
SHOX2-202ENST00000425436 SLC4A3P48751 1232 aa18.76■□□□□ 0.59
SHOX2-202ENST00000425436 GSTO1P78417 241 aa18.76■□□□□ 0.59
SHOX2-202ENST00000425436 SLF2Q8IX21 1173 aa18.76■□□□□ 0.59
SHOX2-202ENST00000425436 GGA3Q9NZ52 723 aa18.76■□□□□ 0.59
SHOX2-202ENST00000425436 MROH7-TTC4A0A0A0MT08 1334 aa18.75■□□□□ 0.59
SHOX2-202ENST00000425436 TOMM70O94826 608 aa18.75■□□□□ 0.59
SHOX2-202ENST00000425436 LDHCP07864 332 aa18.75■□□□□ 0.59
SHOX2-202ENST00000425436 DLK2Q6UY11 383 aa18.75■□□□□ 0.59
SHOX2-202ENST00000425436 ZC3H15Q8WU90 426 aaKnown RBP18.75■□□□□ 0.59
SHOX2-202ENST00000425436 RILPL2Q969X0 211 aa18.75■□□□□ 0.59
SHOX2-202ENST00000425436 FAM163AQ96GL9 167 aaPredicted RBP18.75■□□□□ 0.59
SHOX2-202ENST00000425436 PGAP2Q9UHJ9 254 aa18.75■□□□□ 0.59
SHOX2-202ENST00000425436 MYO1BO43795 1136 aa18.74■□□□□ 0.59
SHOX2-202ENST00000425436 PDE6AP16499 860 aa18.74■□□□□ 0.59
SHOX2-202ENST00000425436 BTDP43251 543 aa18.74■□□□□ 0.59
SHOX2-202ENST00000425436 CACNB3P54284 484 aa18.74■□□□□ 0.59
SHOX2-202ENST00000425436 CHADLQ6NUI6 762 aa18.74■□□□□ 0.59
SHOX2-202ENST00000425436 KBTBD3Q8NAB2 608 aa18.74■□□□□ 0.59
SHOX2-202ENST00000425436 ZNF70Q9UC06 446 aaPredicted RBP18.74■□□□□ 0.59
SHOX2-202ENST00000425436 GAKO14976 1311 aa18.74■□□□□ 0.59
SHOX2-202ENST00000425436 ZNF532Q9HCE3 1301 aa18.74■□□□□ 0.59
SHOX2-202ENST00000425436 CHMLP26374 656 aa18.74■□□□□ 0.59
SHOX2-202ENST00000425436 RABEP1Q15276 862 aa18.74■□□□□ 0.59
SHOX2-202ENST00000425436 CDC42EP5Q6NZY7 148 aa18.74■□□□□ 0.59
SHOX2-202ENST00000425436 MIGA1Q8NAN2 632 aa18.74■□□□□ 0.59
SHOX2-202ENST00000425436 DCPSQ96C86 337 aaKnown RBP18.74■□□□□ 0.59
SHOX2-202ENST00000425436 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.74■□□□□ 0.59
SHOX2-202ENST00000425436 VEZTQ9HBM0 779 aa18.74■□□□□ 0.59
SHOX2-202ENST00000425436 USP40Q9NVE5 1235 aa18.74■□□□□ 0.59
SHOX2-202ENST00000425436 AATFQ9NY61 560 aaKnown RBP eCLIP18.74■□□□□ 0.59
SHOX2-202ENST00000425436 MYH7P12883 1935 aa18.73■□□□□ 0.59
SHOX2-202ENST00000425436 MAST2Q6P0Q8 1798 aa18.73■□□□□ 0.59
SHOX2-202ENST00000425436 GPR75-ASB3A0A0A6YYF3 556 aa18.73■□□□□ 0.59
SHOX2-202ENST00000425436 MCCP23508 829 aa18.73■□□□□ 0.59
SHOX2-202ENST00000425436 USP48Q86UV5 1035 aa18.73■□□□□ 0.59
SHOX2-202ENST00000425436 EVI5LQ96CN4 794 aa18.73■□□□□ 0.59
SHOX2-202ENST00000425436 ESYT1Q9BSJ8 1104 aa18.73■□□□□ 0.59
SHOX2-202ENST00000425436 FSD1Q9BTV5 496 aa18.73■□□□□ 0.59
SHOX2-202ENST00000425436 GLIS2Q9BZE0 524 aaPredicted RBP18.73■□□□□ 0.59
SHOX2-202ENST00000425436 ECM29Q5VYK3 1845 aa18.73■□□□□ 0.59
SHOX2-202ENST00000425436 TCRBV5S4A2TA0A5A2 114 aa18.72■□□□□ 0.59
SHOX2-202ENST00000425436 ADD2P35612 726 aa18.72■□□□□ 0.59
SHOX2-202ENST00000425436 DYNLL1P63167 89 aaKnown RBP18.72■□□□□ 0.59
SHOX2-202ENST00000425436 FMR1Q06787 632 aaKnown RBP eCLIP18.72■□□□□ 0.59
SHOX2-202ENST00000425436 SPDYE2Q495Y8 402 aa18.72■□□□□ 0.59
SHOX2-202ENST00000425436 RBM46Q8TBY0 533 aaKnown RBP18.72■□□□□ 0.59
SHOX2-202ENST00000425436 TCP10L2B9ZVM9 353 aa18.71■□□□□ 0.59
SHOX2-202ENST00000425436 ADM5C9JUS6 153 aa18.71■□□□□ 0.59
SHOX2-202ENST00000425436 PRAMEF18Q5VWM3 479 aa18.71■□□□□ 0.59
SHOX2-202ENST00000425436 KRT26Q7Z3Y9 468 aa18.71■□□□□ 0.59
SHOX2-202ENST00000425436 SMC1BQ8NDV3 1235 aa18.71■□□□□ 0.59
SHOX2-202ENST00000425436 HIP1O00291 1037 aa18.7■□□□□ 0.58
SHOX2-202ENST00000425436 TRAF5O00463 557 aa18.7■□□□□ 0.58
SHOX2-202ENST00000425436 IGSF3O75054 1194 aa18.7■□□□□ 0.58
SHOX2-202ENST00000425436 ZSCAN25Q6NSZ9 544 aa18.7■□□□□ 0.58
SHOX2-202ENST00000425436 SULF1Q8IWU6 871 aa18.7■□□□□ 0.58
SHOX2-202ENST00000425436 SH3RF3Q8TEJ3 882 aaPredicted RBP18.7■□□□□ 0.58
SHOX2-202ENST00000425436 RUFY2Q8WXA3 655 aa18.7■□□□□ 0.58
SHOX2-202ENST00000425436 KIF2CQ99661 725 aa18.7■□□□□ 0.58
SHOX2-202ENST00000425436 NOL10Q9BSC4 688 aaKnown RBP18.7■□□□□ 0.58
SHOX2-202ENST00000425436 AK9Q5TCS8 1911 aa18.69■□□□□ 0.58
SHOX2-202ENST00000425436 RNF113AO15541 343 aaKnown RBP18.69■□□□□ 0.58
SHOX2-202ENST00000425436 BAG3O95817 575 aa18.69■□□□□ 0.58
SHOX2-202ENST00000425436 ITGBL1O95965 494 aaPredicted RBP18.69■□□□□ 0.58
SHOX2-202ENST00000425436 RHBDL3P58872 404 aa18.69■□□□□ 0.58
SHOX2-202ENST00000425436 CDC37L1Q7L3B6 337 aa18.69■□□□□ 0.58
SHOX2-202ENST00000425436 PITPNM2Q9BZ72 1349 aa18.69■□□□□ 0.58
SHOX2-202ENST00000425436 MAGEB6P1A0A0J9YX57 407 aa18.69■□□□□ 0.58
SHOX2-202ENST00000425436 ANAPC15P60006 121 aa18.69■□□□□ 0.58
SHOX2-202ENST00000425436 PPP4CP60510 307 aa18.69■□□□□ 0.58
SHOX2-202ENST00000425436 NFIAQ12857 509 aa18.69■□□□□ 0.58
SHOX2-202ENST00000425436 UBE3CQ15386 1083 aa18.69■□□□□ 0.58
SHOX2-202ENST00000425436 APOBEC3FQ8IUX4 373 aaKnown RBP18.69■□□□□ 0.58
SHOX2-202ENST00000425436 TCP10Q12799 353 aa18.68■□□□□ 0.58
SHOX2-202ENST00000425436 PUS7LQ9H0K6 701 aaKnown RBP18.68■□□□□ 0.58
SHOX2-202ENST00000425436 DEFB129Q9H1M3 183 aa18.68■□□□□ 0.58
SHOX2-202ENST00000425436 TMOD2Q9NZR1 351 aa18.68■□□□□ 0.58
SHOX2-202ENST00000425436 PICALMQ13492 652 aa18.67■□□□□ 0.58
SHOX2-202ENST00000425436 RASA3Q14644 834 aa18.67■□□□□ 0.58
SHOX2-202ENST00000425436 TICAM2Q86XR7 235 aa18.67■□□□□ 0.58
SHOX2-202ENST00000425436 ZFPM1Q8IX07 1006 aa18.67■□□□□ 0.58
SHOX2-202ENST00000425436 TEX11Q8IYF3 940 aa18.67■□□□□ 0.58
SHOX2-202ENST00000425436 SEC62Q99442 399 aaKnown RBP18.67■□□□□ 0.58
SHOX2-202ENST00000425436 RIOK1Q9BRS2 568 aaKnown RBP18.67■□□□□ 0.58
SHOX2-202ENST00000425436 ARMT1Q9H993 441 aa18.67■□□□□ 0.58
SHOX2-202ENST00000425436 WDHD1O75717 1129 aaPredicted RBP18.66■□□□□ 0.58
SHOX2-202ENST00000425436 ZFYP08048 801 aaPredicted RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms