RNA–Protein interactions for RNA: ENST00000425237.5

NEK6-208, Transcript of NIMA related kinase 6, human

TSL 3

Gene NEK6, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEK6-208	ENST00000425237	NBPF9	Q3BBW0	867 aa		13.85	□□□□□ -0.19
NEK6-208	ENST00000425237	ZMYM1	Q5SVZ6	1142 aa		13.85	□□□□□ -0.19
NEK6-208	ENST00000425237	CDC42EP5	Q6NZY7	148 aa		13.85	□□□□□ -0.19
NEK6-208	ENST00000425237	ADGRA1	Q86SQ6	560 aa		13.85	□□□□□ -0.19
NEK6-208	ENST00000425237	OSBP2	Q969R2	916 aa		13.85	□□□□□ -0.19
NEK6-208	ENST00000425237	PITPNM2	Q9BZ72	1349 aa		13.85	□□□□□ -0.19
NEK6-208	ENST00000425237	MAGEB6P1	A0A0J9YX57	407 aa		13.84	□□□□□ -0.19
NEK6-208	ENST00000425237	CHGB	P05060	677 aa		13.84	□□□□□ -0.19
NEK6-208	ENST00000425237	RHBDL3	P58872	404 aa		13.84	□□□□□ -0.19
NEK6-208	ENST00000425237	SPDYE2	Q495Y8	402 aa		13.84	□□□□□ -0.19
NEK6-208	ENST00000425237	SLFNL1	Q499Z3	407 aa		13.84	□□□□□ -0.19
NEK6-208	ENST00000425237	EAPP	Q56P03	285 aa	Predicted RBP	13.84	□□□□□ -0.19
NEK6-208	ENST00000425237	FKBP1C	Q5VVH2	108 aa		13.84	□□□□□ -0.19
NEK6-208	ENST00000425237	LDHD	Q86WU2	507 aa		13.84	□□□□□ -0.19
NEK6-208	ENST00000425237	RIOK1	Q9BRS2	568 aa	Known RBP	13.84	□□□□□ -0.19
NEK6-208	ENST00000425237	TDRD3	Q9H7E2	651 aa	Known RBP	13.84	□□□□□ -0.19
NEK6-208	ENST00000425237	HELLS	Q9NRZ9	838 aa		13.84	□□□□□ -0.19
NEK6-208	ENST00000425237	USP40	Q9NVE5	1235 aa		13.84	□□□□□ -0.19
NEK6-208	ENST00000425237	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.84	□□□□□ -0.19
NEK6-208	ENST00000425237	ZNF70	Q9UC06	446 aa	Predicted RBP	13.84	□□□□□ -0.19
NEK6-208	ENST00000425237	DOCK2	Q92608	1830 aa		13.84	□□□□□ -0.19
NEK6-208	ENST00000425237	KIF3C	O14782	793 aa		13.83	□□□□□ -0.2
NEK6-208	ENST00000425237	TOMM70	O94826	608 aa		13.83	□□□□□ -0.2
NEK6-208	ENST00000425237	MIGA1	Q8NAN2	632 aa		13.83	□□□□□ -0.2
NEK6-208	ENST00000425237	AIDA	Q96BJ3	306 aa		13.83	□□□□□ -0.2
NEK6-208	ENST00000425237	IDI2	Q9BXS1	227 aa		13.83	□□□□□ -0.2
NEK6-208	ENST00000425237	PUS7L	Q9H0K6	701 aa	Known RBP	13.83	□□□□□ -0.2
NEK6-208	ENST00000425237	DIAPH3	Q9NSV4	1193 aa		13.83	□□□□□ -0.2
NEK6-208	ENST00000425237	TMOD2	Q9NZR1	351 aa		13.83	□□□□□ -0.2
NEK6-208	ENST00000425237	MAST2	Q6P0Q8	1798 aa		13.82	□□□□□ -0.2
NEK6-208	ENST00000425237	NPM3	O75607	178 aa	Known RBP	13.82	□□□□□ -0.2
NEK6-208	ENST00000425237	CHML	P26374	656 aa		13.82	□□□□□ -0.2
NEK6-208	ENST00000425237	DYNLL1	P63167	89 aa	Known RBP	13.82	□□□□□ -0.2
NEK6-208	ENST00000425237	MCMDC2	Q4G0Z9	681 aa		13.82	□□□□□ -0.2
NEK6-208	ENST00000425237	ANGEL2	Q5VTE6	544 aa	Known RBP	13.82	□□□□□ -0.2
NEK6-208	ENST00000425237	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.82	□□□□□ -0.2
NEK6-208	ENST00000425237	GGA3	Q9NZ52	723 aa		13.82	□□□□□ -0.2
NEK6-208	ENST00000425237	CLRN2	A0PK11	232 aa		13.81	□□□□□ -0.2
NEK6-208	ENST00000425237	WDHD1	O75717	1129 aa	Predicted RBP	13.81	□□□□□ -0.2
NEK6-208	ENST00000425237	MBD4	O95243	580 aa		13.81	□□□□□ -0.2
NEK6-208	ENST00000425237	GNAT2	P19087	354 aa		13.81	□□□□□ -0.2
NEK6-208	ENST00000425237	NMI	Q13287	307 aa	Predicted RBP	13.81	□□□□□ -0.2
NEK6-208	ENST00000425237	TNFAIP1	Q13829	316 aa		13.81	□□□□□ -0.2
NEK6-208	ENST00000425237	FAM83A	Q86UY5	434 aa		13.81	□□□□□ -0.2
NEK6-208	ENST00000425237	TEX11	Q8IYF3	940 aa		13.81	□□□□□ -0.2
NEK6-208	ENST00000425237	RBM46	Q8TBY0	533 aa	Known RBP	13.81	□□□□□ -0.2
NEK6-208	ENST00000425237	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.81	□□□□□ -0.2
NEK6-208	ENST00000425237	RUFY2	Q8WXA3	655 aa		13.81	□□□□□ -0.2
NEK6-208	ENST00000425237	DCPS	Q96C86	337 aa	Known RBP	13.81	□□□□□ -0.2
NEK6-208	ENST00000425237	FAM227B	Q96M60	508 aa		13.81	□□□□□ -0.2
NEK6-208	ENST00000425237	STRBP	Q96SI9	672 aa	Known RBP	13.81	□□□□□ -0.2
NEK6-208	ENST00000425237	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.81	□□□□□ -0.2
NEK6-208	ENST00000425237	CLEC11A	Q9Y240	323 aa		13.81	□□□□□ -0.2
NEK6-208	ENST00000425237	ASTN2	O75129	1339 aa	Predicted RBP	13.81	□□□□□ -0.2
NEK6-208	ENST00000425237		A0A0D9SFI3	127 aa		13.8	□□□□□ -0.2
NEK6-208	ENST00000425237		M0R2C6	588 aa		13.8	□□□□□ -0.2
NEK6-208	ENST00000425237	GPAA1	O43292	621 aa		13.8	□□□□□ -0.2
NEK6-208	ENST00000425237	ENTPD3	O75355	529 aa		13.8	□□□□□ -0.2
NEK6-208	ENST00000425237	CDC45	O75419	566 aa		13.8	□□□□□ -0.2
NEK6-208	ENST00000425237	POTEI	P0CG38	1075 aa		13.8	□□□□□ -0.2
NEK6-208	ENST00000425237	POTEJ	P0CG39	1038 aa		13.8	□□□□□ -0.2
NEK6-208	ENST00000425237	TNNI2	P48788	182 aa		13.8	□□□□□ -0.2
NEK6-208	ENST00000425237	MFAP1	P55081	439 aa	Known RBP	13.8	□□□□□ -0.2
NEK6-208	ENST00000425237	IFFO2	Q5TF58	517 aa		13.8	□□□□□ -0.2
NEK6-208	ENST00000425237	CWC27	Q6UX04	472 aa	Known RBP	13.8	□□□□□ -0.2
NEK6-208	ENST00000425237	CDC37L1	Q7L3B6	337 aa		13.8	□□□□□ -0.2
NEK6-208	ENST00000425237	LCORL	Q8N3X6	602 aa		13.8	□□□□□ -0.2
NEK6-208	ENST00000425237	SEC62	Q99442	399 aa	Known RBP	13.8	□□□□□ -0.2
NEK6-208	ENST00000425237	ARMT1	Q9H993	441 aa		13.8	□□□□□ -0.2
NEK6-208	ENST00000425237	VEZT	Q9HBM0	779 aa		13.8	□□□□□ -0.2
NEK6-208	ENST00000425237	PPP2R3B	Q9Y5P8	575 aa		13.8	□□□□□ -0.2
NEK6-208	ENST00000425237	RAD50	Q92878	1312 aa		13.8	□□□□□ -0.2
NEK6-208	ENST00000425237	MYH2	Q9UKX2	1941 aa		13.8	□□□□□ -0.2
NEK6-208	ENST00000425237	MYO5A	Q9Y4I1	1855 aa	Known RBP	13.79	□□□□□ -0.2
NEK6-208	ENST00000425237	FSTL1	Q12841	308 aa		13.79	□□□□□ -0.2
NEK6-208	ENST00000425237	NFIA	Q12857	509 aa		13.79	□□□□□ -0.2
NEK6-208	ENST00000425237	CHADL	Q6NUI6	762 aa		13.79	□□□□□ -0.2
NEK6-208	ENST00000425237	CASC1	Q6TDU7	716 aa		13.79	□□□□□ -0.2
NEK6-208	ENST00000425237	SULF1	Q8IWU6	871 aa		13.79	□□□□□ -0.2
NEK6-208	ENST00000425237	FAM151A	Q8WW52	585 aa		13.79	□□□□□ -0.2
NEK6-208	ENST00000425237	FAM198A	Q9UFP1	575 aa		13.79	□□□□□ -0.2
NEK6-208	ENST00000425237	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.79	□□□□□ -0.2
NEK6-208	ENST00000425237	TCP10L2	B9ZVM9	353 aa		13.78	□□□□□ -0.2
NEK6-208	ENST00000425237	PATL2	C9JE40	543 aa	Known RBP	13.78	□□□□□ -0.2
NEK6-208	ENST00000425237	USP5	P45974	858 aa		13.78	□□□□□ -0.2
NEK6-208	ENST00000425237	CACNB3	P54284	484 aa		13.78	□□□□□ -0.2
NEK6-208	ENST00000425237	GIMAP6	Q6P9H5	292 aa		13.78	□□□□□ -0.2
NEK6-208	ENST00000425237	KRT26	Q7Z3Y9	468 aa		13.78	□□□□□ -0.2
NEK6-208	ENST00000425237	SMC1B	Q8NDV3	1235 aa		13.78	□□□□□ -0.2
NEK6-208	ENST00000425237	TGFBRAP1	Q8WUH2	860 aa		13.78	□□□□□ -0.2
NEK6-208	ENST00000425237	DEFB129	Q9H1M3	183 aa		13.78	□□□□□ -0.2
NEK6-208	ENST00000425237	DDX4	Q9NQI0	724 aa	Known RBP	13.78	□□□□□ -0.2
NEK6-208	ENST00000425237	ATP8A2	Q9NTI2	1148 aa		13.78	□□□□□ -0.2
NEK6-208	ENST00000425237	MKRN1	Q9UHC7	482 aa	Known RBP	13.78	□□□□□ -0.2
NEK6-208	ENST00000425237	SLC4A4	Q9Y6R1	1079 aa		13.78	□□□□□ -0.2
NEK6-208	ENST00000425237	CCDC171	Q6TFL3	1326 aa		13.78	□□□□□ -0.2
NEK6-208	ENST00000425237	ADAMTSL1	Q8N6G6	1762 aa		13.78	□□□□□ -0.2
NEK6-208	ENST00000425237	SGSM2	O43147	1006 aa		13.77	□□□□□ -0.21
NEK6-208	ENST00000425237	FLT1	P17948	1338 aa		13.77	□□□□□ -0.21
NEK6-208	ENST00000425237	RASA3	Q14644	834 aa		13.77	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms