RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 UBASH3AP57075 661 aa16.4■□□□□ 0.22
TPM3P9-201ENST00000424846 TRIM65Q6PJ69 517 aa16.4■□□□□ 0.22
TPM3P9-201ENST00000424846 HOMER1Q86YM7 354 aa16.4■□□□□ 0.22
TPM3P9-201ENST00000424846 PSDA5PKW4 1024 aaPredicted RBP16.39■□□□□ 0.21
TPM3P9-201ENST00000424846 METAP2P50579 478 aaKnown RBP eCLIP16.39■□□□□ 0.21
TPM3P9-201ENST00000424846 TERF2Q15554 542 aa16.39■□□□□ 0.21
TPM3P9-201ENST00000424846 TAF7LQ5H9L4 462 aa16.39■□□□□ 0.21
TPM3P9-201ENST00000424846 SLC9C2Q5TAH2 1124 aa16.39■□□□□ 0.21
TPM3P9-201ENST00000424846 APOA5Q6Q788 366 aa16.39■□□□□ 0.21
TPM3P9-201ENST00000424846 FAM177A1Q8N128 213 aaPredicted RBP16.39■□□□□ 0.21
TPM3P9-201ENST00000424846 UTP14AQ9BVJ6 771 aaKnown RBP16.39■□□□□ 0.21
TPM3P9-201ENST00000424846 ATG3Q9NT62 314 aa16.39■□□□□ 0.21
TPM3P9-201ENST00000424846 FAM217BQ9NTX9 383 aaPredicted RBP16.39■□□□□ 0.21
TPM3P9-201ENST00000424846 SPEF2Q9C093 1822 aa16.39■□□□□ 0.21
TPM3P9-201ENST00000424846 RIC1Q4ADV7 1423 aa16.39■□□□□ 0.21
TPM3P9-201ENST00000424846 APPP05067 770 aa16.39■□□□□ 0.21
TPM3P9-201ENST00000424846 H2AFXP16104 143 aaPredicted RBP16.39■□□□□ 0.21
TPM3P9-201ENST00000424846 GPTP24298 496 aa16.39■□□□□ 0.21
TPM3P9-201ENST00000424846 CLCN6P51797 869 aa16.39■□□□□ 0.21
TPM3P9-201ENST00000424846 CFAP100Q494V2 611 aa16.39■□□□□ 0.21
TPM3P9-201ENST00000424846 ANGEL1Q9UNK9 670 aaKnown RBP16.39■□□□□ 0.21
TPM3P9-201ENST00000424846 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.39■□□□□ 0.211e-7■■■□□ 17
TPM3P9-201ENST00000424846 MST1RQ04912 1400 aa16.39■□□□□ 0.21
TPM3P9-201ENST00000424846 ZNF142P52746 1687 aaPredicted RBP16.39■□□□□ 0.21
TPM3P9-201ENST00000424846 AKAP11Q9UKA4 1901 aa16.39■□□□□ 0.21
TPM3P9-201ENST00000424846 SH2B2O14492 632 aaPredicted RBP16.39■□□□□ 0.21
TPM3P9-201ENST00000424846 SERPINC1P01008 464 aa16.39■□□□□ 0.21
TPM3P9-201ENST00000424846 ZFYP08048 801 aaPredicted RBP16.39■□□□□ 0.21
TPM3P9-201ENST00000424846 ZMYM6O95789 1325 aa16.38■□□□□ 0.21
TPM3P9-201ENST00000424846 SNAP23O00161 211 aa16.38■□□□□ 0.21
TPM3P9-201ENST00000424846 IDH1O75874 414 aaKnown RBP16.38■□□□□ 0.21
TPM3P9-201ENST00000424846 GUCY1A2P33402 732 aa16.38■□□□□ 0.21
TPM3P9-201ENST00000424846 GABPB1Q06547 395 aaPredicted RBP16.38■□□□□ 0.21
TPM3P9-201ENST00000424846 TCIRG1Q13488 830 aa16.38■□□□□ 0.21
TPM3P9-201ENST00000424846 ZCRB1Q8TBF4 217 aaKnown RBP16.38■□□□□ 0.21
TPM3P9-201ENST00000424846 WWC3Q9ULE0 1092 aa16.38■□□□□ 0.21
TPM3P9-201ENST00000424846 PCDHA5Q9Y5H7 936 aa16.38■□□□□ 0.21
TPM3P9-201ENST00000424846 IKBKBO14920 756 aa16.38■□□□□ 0.21
TPM3P9-201ENST00000424846 ADD2P35612 726 aa16.38■□□□□ 0.21
TPM3P9-201ENST00000424846 NTRK3Q16288 839 aa16.38■□□□□ 0.21
TPM3P9-201ENST00000424846 ZNF827Q17R98 1081 aa16.38■□□□□ 0.21
TPM3P9-201ENST00000424846 ARHGAP29Q52LW3 1261 aa16.38■□□□□ 0.21
TPM3P9-201ENST00000424846 REXO1L1PQ8IX06 675 aa16.38■□□□□ 0.21
TPM3P9-201ENST00000424846 GREM2Q9H772 168 aa16.38■□□□□ 0.21
TPM3P9-201ENST00000424846 ETF1P62495 437 aaKnown RBP16.37■□□□□ 0.21
TPM3P9-201ENST00000424846 MYL5Q02045 173 aa16.37■□□□□ 0.21
TPM3P9-201ENST00000424846 METTL24Q5JXM2 366 aa16.37■□□□□ 0.21
TPM3P9-201ENST00000424846 AKAP2Q9Y2D5 859 aa16.37■□□□□ 0.21
TPM3P9-201ENST00000424846 TMEM139Q8IV31 216 aa16.37■□□□□ 0.21
TPM3P9-201ENST00000424846 GRAMD1CQ8IYS0 662 aa16.37■□□□□ 0.21
TPM3P9-201ENST00000424846 CMTR1Q8N1G2 835 aaKnown RBP16.37■□□□□ 0.21
TPM3P9-201ENST00000424846 FHOD1Q9Y613 1164 aa16.37■□□□□ 0.21
TPM3P9-201ENST00000424846 MYH7P12883 1935 aa16.37■□□□□ 0.21
TPM3P9-201ENST00000424846 UBN2Q6ZU65 1347 aa16.37■□□□□ 0.21
TPM3P9-201ENST00000424846 ECM29Q5VYK3 1845 aa16.37■□□□□ 0.21
TPM3P9-201ENST00000424846 IFIT5Q13325 482 aaKnown RBP16.36■□□□□ 0.21
TPM3P9-201ENST00000424846 HLFQ16534 295 aa16.36■□□□□ 0.21
TPM3P9-201ENST00000424846 RESP18Q5W5W9 173 aa16.36■□□□□ 0.21
TPM3P9-201ENST00000424846 CCDC82Q8N4S0 544 aa16.36■□□□□ 0.21
TPM3P9-201ENST00000424846 RIPOR2Q9Y4F9 1068 aa16.36■□□□□ 0.21
TPM3P9-201ENST00000424846 KIF2AO00139 706 aaPredicted RBP16.36■□□□□ 0.21
TPM3P9-201ENST00000424846 PRR29P0C7W0 189 aa16.36■□□□□ 0.21
TPM3P9-201ENST00000424846 ATF3P18847 181 aa16.36■□□□□ 0.21
TPM3P9-201ENST00000424846 TRHP20396 242 aaPredicted RBP16.36■□□□□ 0.21
TPM3P9-201ENST00000424846 PHKA1P46020 1223 aa16.36■□□□□ 0.21
TPM3P9-201ENST00000424846 GNL2Q13823 731 aaKnown RBP16.36■□□□□ 0.21
TPM3P9-201ENST00000424846 TOM1L2Q6ZVM7 507 aa16.36■□□□□ 0.21
TPM3P9-201ENST00000424846 HELBQ8NG08 1087 aaPredicted RBP16.36■□□□□ 0.21
TPM3P9-201ENST00000424846 IGDCC4Q8TDY8 1250 aa16.36■□□□□ 0.21
TPM3P9-201ENST00000424846 ZNF532Q9HCE3 1301 aa16.36■□□□□ 0.21
TPM3P9-201ENST00000424846 TPM4P67936 248 aa16.35■□□□□ 0.21
TPM3P9-201ENST00000424846 CTDSPL2Q05D32 466 aa16.35■□□□□ 0.21
TPM3P9-201ENST00000424846 FMR1Q06787 632 aaKnown RBP eCLIP16.35■□□□□ 0.21
TPM3P9-201ENST00000424846 LDHAL6AQ6ZMR3 332 aa16.35■□□□□ 0.21
TPM3P9-201ENST00000424846 TICAM2Q86XR7 235 aa16.35■□□□□ 0.21
TPM3P9-201ENST00000424846 VSTM4Q8IW00 320 aa16.35■□□□□ 0.21
TPM3P9-201ENST00000424846 TRMT44Q8IYL2 757 aaKnown RBP16.35■□□□□ 0.21
TPM3P9-201ENST00000424846 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.35■□□□□ 0.21
TPM3P9-201ENST00000424846 SEC31BQ9NQW1 1179 aa16.35■□□□□ 0.21
TPM3P9-201ENST00000424846 KCNJ14Q9UNX9 436 aa16.35■□□□□ 0.21
TPM3P9-201ENST00000424846 UBR2Q8IWV8 1755 aa16.35■□□□□ 0.21
TPM3P9-201ENST00000424846 CSF1RP07333 972 aa16.35■□□□□ 0.21
TPM3P9-201ENST00000424846 TRDNQ13061 729 aa16.35■□□□□ 0.21
TPM3P9-201ENST00000424846 DNAJC10Q8IXB1 793 aa16.35■□□□□ 0.21
TPM3P9-201ENST00000424846 MED15Q96RN5 788 aa16.35■□□□□ 0.21
TPM3P9-201ENST00000424846 LY9Q9HBG7 655 aa16.35■□□□□ 0.21
TPM3P9-201ENST00000424846 BTBD18B2RXH4 712 aa16.35■□□□□ 0.21
TPM3P9-201ENST00000424846 URI1O94763 535 aaPredicted RBP16.35■□□□□ 0.21
TPM3P9-201ENST00000424846 SEC31AO94979 1220 aaKnown RBP16.35■□□□□ 0.21
TPM3P9-201ENST00000424846 ITGA6P23229 1130 aa16.35■□□□□ 0.21
TPM3P9-201ENST00000424846 TOB1P50616 345 aaPredicted RBP16.35■□□□□ 0.21
TPM3P9-201ENST00000424846 CHMP4CQ96CF2 233 aa16.35■□□□□ 0.21
TPM3P9-201ENST00000424846 TIGD1Q96MW7 591 aa16.35■□□□□ 0.21
TPM3P9-201ENST00000424846 CARD6Q9BX69 1037 aa16.35■□□□□ 0.21
TPM3P9-201ENST00000424846 SLC26A6Q9BXS9 759 aa16.35■□□□□ 0.21
TPM3P9-201ENST00000424846 KCNH3Q9ULD8 1083 aa16.35■□□□□ 0.21
TPM3P9-201ENST00000424846 VWA3AA6NCI4 1184 aa16.34■□□□□ 0.21
TPM3P9-201ENST00000424846 PPP6R2O75170 966 aa16.34■□□□□ 0.21
TPM3P9-201ENST00000424846 NFXL1Q6ZNB6 911 aa16.34■□□□□ 0.21
TPM3P9-201ENST00000424846 KRBA2Q6ZNG9 492 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms