RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 USP40Q9NVE5 1235 aa30.81■■■□□ 2.52
TSPAN3-203ENST00000424443 STAP2Q9UGK3 403 aa30.81■■■□□ 2.52
TSPAN3-203ENST00000424443 MYO5AQ9Y4I1 1855 aaKnown RBP30.81■■■□□ 2.52
TSPAN3-203ENST00000424443 CYP7A1P22680 504 aa30.8■■■□□ 2.52
TSPAN3-203ENST00000424443 TNNI2P48788 182 aa30.8■■■□□ 2.52
TSPAN3-203ENST00000424443 TMED8Q6PL24 325 aaPredicted RBP30.8■■■□□ 2.52
TSPAN3-203ENST00000424443 CENPQQ7L2Z9 268 aaPredicted RBP30.8■■■□□ 2.52
TSPAN3-203ENST00000424443 MAGEB6Q8N7X4 407 aa30.8■■■□□ 2.52
TSPAN3-203ENST00000424443 ZNF408Q9H9D4 720 aa30.79■■■□□ 2.52
TSPAN3-203ENST00000424443 DOCK2Q92608 1830 aa30.79■■■□□ 2.52
TSPAN3-203ENST00000424443 TCP10L2B9ZVM9 353 aa30.78■■■□□ 2.52
TSPAN3-203ENST00000424443 BAG3O95817 575 aa30.78■■■□□ 2.52
TSPAN3-203ENST00000424443 SLC9C2Q5TAH2 1124 aa30.78■■■□□ 2.52
TSPAN3-203ENST00000424443 CDC42EP5Q6NZY7 148 aa30.78■■■□□ 2.52
TSPAN3-203ENST00000424443 DEFB129Q9H1M3 183 aa30.78■■■□□ 2.52
TSPAN3-203ENST00000424443 GPR75-ASB3A0A0A6YYF3 556 aa30.78■■■□□ 2.52
TSPAN3-203ENST00000424443 APLP1P51693 650 aa30.78■■■□□ 2.52
TSPAN3-203ENST00000424443 MAP4K4O95819 1239 aaPredicted RBP30.77■■■□□ 2.52
TSPAN3-203ENST00000424443 CACNB3P54284 484 aa30.77■■■□□ 2.52
TSPAN3-203ENST00000424443 FMR1Q06787 632 aaKnown RBP eCLIP30.77■■■□□ 2.52
TSPAN3-203ENST00000424443 ZSCAN25Q6NSZ9 544 aa30.77■■■□□ 2.52
TSPAN3-203ENST00000424443 PPP2R3BQ9Y5P8 575 aa30.77■■■□□ 2.52
TSPAN3-203ENST00000424443 HSPA6P17066 643 aa30.76■■■□□ 2.51
TSPAN3-203ENST00000424443 CDCA5Q96FF9 252 aa30.76■■■□□ 2.51
TSPAN3-203ENST00000424443 CELF2O95319 508 aaKnown RBP30.75■■■□□ 2.51
TSPAN3-203ENST00000424443 RASA3Q14644 834 aa30.75■■■□□ 2.51
TSPAN3-203ENST00000424443 FKBP1CQ5VVH2 108 aa30.75■■■□□ 2.51
TSPAN3-203ENST00000424443 DLK2Q6UY11 383 aa30.75■■■□□ 2.51
TSPAN3-203ENST00000424443 PLEKHM2Q8IWE5 1019 aa30.75■■■□□ 2.51
TSPAN3-203ENST00000424443 AATFQ9NY61 560 aaKnown RBP eCLIP30.75■■■□□ 2.51
TSPAN3-203ENST00000424443 PDE6AP16499 860 aa30.74■■■□□ 2.51
TSPAN3-203ENST00000424443 PLCG2P16885 1265 aa30.74■■■□□ 2.51
TSPAN3-203ENST00000424443 NF2P35240 595 aa30.74■■■□□ 2.51
TSPAN3-203ENST00000424443 KBTBD3Q8NAB2 608 aa30.74■■■□□ 2.51
TSPAN3-203ENST00000424443 LRRFIP1Q32MZ4 808 aaKnown RBP30.73■■■□□ 2.51
TSPAN3-203ENST00000424443 TMEM88BA6NKF7 163 aa30.73■■■□□ 2.51
TSPAN3-203ENST00000424443 PRAMEF18Q5VWM3 479 aa30.73■■■□□ 2.51
TSPAN3-203ENST00000424443 ZNF532Q9HCE3 1301 aa30.72■■■□□ 2.51
TSPAN3-203ENST00000424443 TRPM7Q96QT4 1865 aa30.72■■■□□ 2.51
TSPAN3-203ENST00000424443 ADGRA1Q86SQ6 560 aa30.72■■■□□ 2.51
TSPAN3-203ENST00000424443 FAM83AQ86UY5 434 aa30.72■■■□□ 2.51
TSPAN3-203ENST00000424443 CERS3Q8IU89 383 aa30.72■■■□□ 2.51
TSPAN3-203ENST00000424443 OSBPL3Q9H4L5 887 aa30.72■■■□□ 2.51
TSPAN3-203ENST00000424443 PPP4R2Q9NY27 417 aa30.72■■■□□ 2.51
TSPAN3-203ENST00000424443 MIGA1Q8NAN2 632 aa30.71■■■□□ 2.51
TSPAN3-203ENST00000424443 FSD1Q9BTV5 496 aa30.71■■■□□ 2.51
TSPAN3-203ENST00000424443 ADD2P35612 726 aa30.7■■■□□ 2.51
TSPAN3-203ENST00000424443 PPP4CP60510 307 aa30.7■■■□□ 2.51
TSPAN3-203ENST00000424443 TEX11Q8IYF3 940 aa30.7■■■□□ 2.51
TSPAN3-203ENST00000424443 TRIM6-TRIM34B2RNG4 842 aa30.69■■■□□ 2.5
TSPAN3-203ENST00000424443 PDE4AP27815 886 aa30.69■■■□□ 2.5
TSPAN3-203ENST00000424443 RHBDL3P58872 404 aa30.69■■■□□ 2.5
TSPAN3-203ENST00000424443 TCP10Q12799 353 aa30.69■■■□□ 2.5
TSPAN3-203ENST00000424443 SUPT20HL1Q3ZLR7 823 aa30.69■■■□□ 2.5
TSPAN3-203ENST00000424443 TMEM39BQ9GZU3 492 aa30.69■■■□□ 2.5
TSPAN3-203ENST00000424443 NFIAQ12857 509 aa30.68■■■□□ 2.5
TSPAN3-203ENST00000424443 PICALMQ13492 652 aa30.68■■■□□ 2.5
TSPAN3-203ENST00000424443 CST9Q5W186 159 aa30.68■■■□□ 2.5
TSPAN3-203ENST00000424443 C2orf69Q8N8R5 385 aa30.68■■■□□ 2.5
TSPAN3-203ENST00000424443 SH3RF3Q8TEJ3 882 aaPredicted RBP30.68■■■□□ 2.5
TSPAN3-203ENST00000424443 EVI5LQ96CN4 794 aa30.68■■■□□ 2.5
TSPAN3-203ENST00000424443 IDI2Q9BXS1 227 aa30.68■■■□□ 2.5
TSPAN3-203ENST00000424443 CREBZFQ9NS37 354 aa30.68■■■□□ 2.5
TSPAN3-203ENST00000424443 MAGEB6P1A0A0J9YX57 407 aa30.68■■■□□ 2.5
TSPAN3-203ENST00000424443 UBE3CQ15386 1083 aa30.68■■■□□ 2.5
TSPAN3-203ENST00000424443 FAM151AQ8WW52 585 aa30.68■■■□□ 2.5
TSPAN3-203ENST00000424443 ABT1Q9ULW3 272 aaKnown RBP30.68■■■□□ 2.5
TSPAN3-203ENST00000424443 MYH7P12883 1935 aa30.67■■■□□ 2.5
TSPAN3-203ENST00000424443 CNTNAP1P78357 1384 aa30.67■■■□□ 2.5
TSPAN3-203ENST00000424443 ZFYP08048 801 aaPredicted RBP30.67■■■□□ 2.5
TSPAN3-203ENST00000424443 RGS3P49796 1198 aa30.67■■■□□ 2.5
TSPAN3-203ENST00000424443 DYNLL1P63167 89 aaKnown RBP30.67■■■□□ 2.5
TSPAN3-203ENST00000424443 GBA2Q9HCG7 927 aaPredicted RBP30.67■■■□□ 2.5
TSPAN3-203ENST00000424443 TCRBV5S4A2TA0A5A2 114 aa30.66■■■□□ 2.5
TSPAN3-203ENST00000424443 ENTPD3O75355 529 aa30.66■■■□□ 2.5
TSPAN3-203ENST00000424443 WDHD1O75717 1129 aaPredicted RBP30.66■■■□□ 2.5
TSPAN3-203ENST00000424443 TTLL12Q14166 644 aaPredicted RBP30.66■■■□□ 2.5
TSPAN3-203ENST00000424443 FAM198AQ9UFP1 575 aa30.66■■■□□ 2.5
TSPAN3-203ENST00000424443 NBPF12Q5TAG4 269 aaPredicted RBP30.65■■■□□ 2.5
TSPAN3-203ENST00000424443 RILPL2Q969X0 211 aa30.65■■■□□ 2.5
TSPAN3-203ENST00000424443 RNF113AO15541 343 aaKnown RBP30.64■■■□□ 2.5
TSPAN3-203ENST00000424443 ZSCAN29Q8IWY8 852 aaPredicted RBP30.64■■■□□ 2.5
TSPAN3-203ENST00000424443 HOOK2Q96ED9 719 aa30.64■■■□□ 2.5
TSPAN3-203ENST00000424443 PPP1R12BO60237 982 aaPredicted RBP30.63■■■□□ 2.49
TSPAN3-203ENST00000424443 USP5P45974 858 aa30.63■■■□□ 2.49
TSPAN3-203ENST00000424443 TGFBRAP1Q8WUH2 860 aa30.63■■■□□ 2.49
TSPAN3-203ENST00000424443 TEPSINQ96N21 525 aa30.63■■■□□ 2.49
TSPAN3-203ENST00000424443 RPAP1Q9BWH6 1393 aaPredicted RBP30.62■■■□□ 2.49
TSPAN3-203ENST00000424443 NPM3O75607 178 aaKnown RBP30.62■■■□□ 2.49
TSPAN3-203ENST00000424443 FKBP1BP68106 108 aa30.62■■■□□ 2.49
TSPAN3-203ENST00000424443 PRKG1Q13976 671 aa30.62■■■□□ 2.49
TSPAN3-203ENST00000424443 SLFNL1Q499Z3 407 aa30.62■■■□□ 2.49
TSPAN3-203ENST00000424443 AIDAQ96BJ3 306 aa30.62■■■□□ 2.49
TSPAN3-203ENST00000424443 CRNKL1Q9BZJ0 848 aaKnown RBP30.62■■■□□ 2.49
TSPAN3-203ENST00000424443 DDX4Q9NQI0 724 aaKnown RBP30.62■■■□□ 2.49
TSPAN3-203ENST00000424443 AK9Q5TCS8 1911 aa30.61■■■□□ 2.49
TSPAN3-203ENST00000424443 CHGBP05060 677 aa30.61■■■□□ 2.49
TSPAN3-203ENST00000424443 HTRA3P83110 453 aa30.61■■■□□ 2.49
TSPAN3-203ENST00000424443 ARMC9Q7Z3E5 817 aa30.61■■■□□ 2.49
TSPAN3-203ENST00000424443 APPBP2Q92624 585 aa30.61■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms