RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 CHST3Q7LGC8 479 aa12.25□□□□□ -0.45
PTCH1-206ENST00000421141 SPA17Q15506 151 aa12.25□□□□□ -0.45
PTCH1-206ENST00000421141 CCDC40Q4G0X9 1142 aa12.25□□□□□ -0.45
PTCH1-206ENST00000421141 MAPKAPK5Q8IW41 473 aa12.25□□□□□ -0.45
PTCH1-206ENST00000421141 DBNDD2Q9BQY9 259 aa12.25□□□□□ -0.45
PTCH1-206ENST00000421141 MASTLQ96GX5 879 aa12.24□□□□□ -0.45
PTCH1-206ENST00000421141 ARID3AQ99856 593 aa12.24□□□□□ -0.45
PTCH1-206ENST00000421141 ABT1Q9ULW3 272 aaKnown RBP12.24□□□□□ -0.45
PTCH1-206ENST00000421141 MTIF2P46199 727 aaKnown RBP12.24□□□□□ -0.45
PTCH1-206ENST00000421141 ERFEQ4G0M1 354 aa12.24□□□□□ -0.45
PTCH1-206ENST00000421141 ARMC9Q7Z3E5 817 aa12.24□□□□□ -0.45
PTCH1-206ENST00000421141 TCHPQ9BT92 498 aa12.24□□□□□ -0.45
PTCH1-206ENST00000421141 CARMIL3Q8ND23 1372 aa12.24□□□□□ -0.45
PTCH1-206ENST00000421141 PHACTR2O75167 634 aa12.24□□□□□ -0.45
PTCH1-206ENST00000421141 ERCC4Q92889 916 aaPredicted RBP12.24□□□□□ -0.45
PTCH1-206ENST00000421141 ZKSCAN3Q9BRR0 538 aa12.24□□□□□ -0.45
PTCH1-206ENST00000421141 CCDC102BQ68D86 513 aa12.24□□□□□ -0.45
PTCH1-206ENST00000421141 RUFY3Q7L099 469 aa12.24□□□□□ -0.45
PTCH1-206ENST00000421141 KBTBD3Q8NAB2 608 aa12.24□□□□□ -0.45
PTCH1-206ENST00000421141 STK24Q9Y6E0 443 aa12.24□□□□□ -0.45
PTCH1-206ENST00000421141 MROH2AA6NES4 1674 aa12.24□□□□□ -0.45
PTCH1-206ENST00000421141 DKC1O60832 514 aaKnown RBP eCLIP12.24□□□□□ -0.45
PTCH1-206ENST00000421141 KCNQ4P56696 695 aa12.24□□□□□ -0.45
PTCH1-206ENST00000421141 IMPG2Q9BZV3 1241 aa12.24□□□□□ -0.45
PTCH1-206ENST00000421141 ZBTB21Q9ULJ3 1066 aa12.24□□□□□ -0.45
PTCH1-206ENST00000421141 CPS1P31327 1500 aa12.23□□□□□ -0.45
PTCH1-206ENST00000421141 CCDC172P0C7W6 258 aa12.23□□□□□ -0.45
PTCH1-206ENST00000421141 DTHD1Q6ZMT9 781 aa12.23□□□□□ -0.45
PTCH1-206ENST00000421141 TCP10L2B9ZVM9 353 aa12.23□□□□□ -0.45
PTCH1-206ENST00000421141 FAM13AO94988 1023 aa12.23□□□□□ -0.45
PTCH1-206ENST00000421141 SP4Q02446 784 aa12.23□□□□□ -0.45
PTCH1-206ENST00000421141 PLEKHM2Q8IWE5 1019 aa12.23□□□□□ -0.45
PTCH1-206ENST00000421141 KIFC2Q96AC6 838 aa12.23□□□□□ -0.45
PTCH1-206ENST00000421141 MYO3AQ8NEV4 1616 aa12.23□□□□□ -0.45
PTCH1-206ENST00000421141 TAOK3Q9H2K8 898 aa12.23□□□□□ -0.45
PTCH1-206ENST00000421141 PUF60Q9UHX1 559 aaKnown RBP12.23□□□□□ -0.45
PTCH1-206ENST00000421141 SCNN1DP51172 638 aa12.23□□□□□ -0.45
PTCH1-206ENST00000421141 TRIM75PA6NK02 468 aa12.23□□□□□ -0.45
PTCH1-206ENST00000421141 SEMA3EO15041 775 aa12.23□□□□□ -0.45
PTCH1-206ENST00000421141 KRT79Q5XKE5 535 aa12.23□□□□□ -0.45
PTCH1-206ENST00000421141 KRT13P13646 458 aa12.23□□□□□ -0.45
PTCH1-206ENST00000421141 PNMA2Q9UL42 364 aa12.23□□□□□ -0.45
PTCH1-206ENST00000421141 CACNA1FO60840 1977 aa12.22□□□□□ -0.45
PTCH1-206ENST00000421141 GYG1P46976 350 aa12.22□□□□□ -0.45
PTCH1-206ENST00000421141 GREM2Q9H772 168 aa12.22□□□□□ -0.45
PTCH1-206ENST00000421141 RLBP1P12271 317 aa12.22□□□□□ -0.45
PTCH1-206ENST00000421141 SYKP43405 635 aa12.22□□□□□ -0.45
PTCH1-206ENST00000421141 HSP90B2PQ58FF3 399 aa12.22□□□□□ -0.45
PTCH1-206ENST00000421141 RRAGBQ5VZM2 374 aa12.22□□□□□ -0.45
PTCH1-206ENST00000421141 CHURC1Q8WUH1 139 aa12.22□□□□□ -0.45
PTCH1-206ENST00000421141 TBC1D5Q92609 795 aa12.22□□□□□ -0.45
PTCH1-206ENST00000421141 SEPT7Q16181 437 aaKnown RBP12.22□□□□□ -0.45
PTCH1-206ENST00000421141 ANGEL1Q9UNK9 670 aaKnown RBP12.22□□□□□ -0.45
PTCH1-206ENST00000421141 MCM7P33993 719 aa12.22□□□□□ -0.45
PTCH1-206ENST00000421141 USP8P40818 1118 aa12.22□□□□□ -0.45
PTCH1-206ENST00000421141 EN1Q05925 392 aaPredicted RBP12.22□□□□□ -0.45
PTCH1-206ENST00000421141 CERKLQ49MI3 558 aaPredicted RBP12.22□□□□□ -0.45
PTCH1-206ENST00000421141 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.22□□□□□ -0.45
PTCH1-206ENST00000421141 TMEM131LA2VDJ0 1609 aa12.22□□□□□ -0.45
PTCH1-206ENST00000421141 DEPDC5O75140 1603 aa12.22□□□□□ -0.45
PTCH1-206ENST00000421141 USP17L3A6NCW0 530 aa12.22□□□□□ -0.45
PTCH1-206ENST00000421141 USP17L4A6NCW7 530 aa12.22□□□□□ -0.45
PTCH1-206ENST00000421141 B4E1Z4 1266 aa12.22□□□□□ -0.45
PTCH1-206ENST00000421141 UBE4AQ14139 1066 aa12.22□□□□□ -0.45
PTCH1-206ENST00000421141 USP17L1Q7RTZ2 530 aa12.22□□□□□ -0.45
PTCH1-206ENST00000421141 DDX19AQ9NUU7 478 aaKnown RBP12.22□□□□□ -0.45
PTCH1-206ENST00000421141 KIF1AQ12756 1690 aa12.22□□□□□ -0.45
PTCH1-206ENST00000421141 M0QZ92 97 aa12.22□□□□□ -0.45
PTCH1-206ENST00000421141 PPM1FP49593 454 aaPredicted RBP12.22□□□□□ -0.45
PTCH1-206ENST00000421141 CPXCR1Q8N123 301 aa12.22□□□□□ -0.45
PTCH1-206ENST00000421141 TAF4BQ92750 862 aa12.22□□□□□ -0.45
PTCH1-206ENST00000421141 SYNCQ9H7C4 482 aa12.22□□□□□ -0.45
PTCH1-206ENST00000421141 BCORL1Q5H9F3 1711 aa12.21□□□□□ -0.45
PTCH1-206ENST00000421141 RPS6KA4O75676 772 aa12.21□□□□□ -0.45
PTCH1-206ENST00000421141 ZAP70P43403 619 aa12.21□□□□□ -0.45
PTCH1-206ENST00000421141 KIF13AQ9H1H9 1805 aa12.21□□□□□ -0.45
PTCH1-206ENST00000421141 ZBTB7AO95365 584 aa12.21□□□□□ -0.45
PTCH1-206ENST00000421141 CDAN1Q8IWY9 1227 aa12.21□□□□□ -0.45
PTCH1-206ENST00000421141 NECAB1Q8N987 351 aa12.21□□□□□ -0.45
PTCH1-206ENST00000421141 PPFIA3O75145 1194 aa12.21□□□□□ -0.45
PTCH1-206ENST00000421141 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.21□□□□□ -0.45
PTCH1-206ENST00000421141 CHMLP26374 656 aa12.21□□□□□ -0.46
PTCH1-206ENST00000421141 PPP2R5BQ15173 497 aa12.21□□□□□ -0.46
PTCH1-206ENST00000421141 NLRP10Q86W26 655 aa12.21□□□□□ -0.46
PTCH1-206ENST00000421141 NUP88Q99567 741 aaPredicted RBP12.21□□□□□ -0.46
PTCH1-206ENST00000421141 BCAMP50895 628 aa12.21□□□□□ -0.46
PTCH1-206ENST00000421141 APOBRQ0VD83 1088 aa12.21□□□□□ -0.46
PTCH1-206ENST00000421141 FERMT1Q9BQL6 677 aa12.21□□□□□ -0.46
PTCH1-206ENST00000421141 COL15A1P39059 1388 aa12.21□□□□□ -0.46
PTCH1-206ENST00000421141 PATL2C9JE40 543 aaKnown RBP12.21□□□□□ -0.46
PTCH1-206ENST00000421141 CCNT1O60563 726 aaKnown RBP12.21□□□□□ -0.46
PTCH1-206ENST00000421141 CIAO1O76071 339 aa12.21□□□□□ -0.46
PTCH1-206ENST00000421141 MYCLP12524 364 aaPredicted RBP12.21□□□□□ -0.46
PTCH1-206ENST00000421141 USH1GQ495M9 461 aa12.21□□□□□ -0.46
PTCH1-206ENST00000421141 STX1AQ16623 288 aa12.2□□□□□ -0.46
PTCH1-206ENST00000421141 SPON1Q9HCB6 807 aa12.2□□□□□ -0.46
PTCH1-206ENST00000421141 NRKQ7Z2Y5 1582 aa12.2□□□□□ -0.46
PTCH1-206ENST00000421141 SMTNP53814 917 aa12.2□□□□□ -0.46
PTCH1-206ENST00000421141 PNMA6EA0A0J9YXQ4 647 aa12.2□□□□□ -0.46
PTCH1-206ENST00000421141 PDE8BO95263 885 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms