RNA–Protein interactions for RNA: ENST00000420886.6

SBNO1-202, Transcript of strawberry notch homolog 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SBNO1, Length 10,981 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1-202ENST00000420886 POLR3DP05423 398 aaPredicted RBP7.23□□□□□ -1.25
SBNO1-202ENST00000420886 EPHB4P54760 987 aa7.23□□□□□ -1.25
SBNO1-202ENST00000420886 USP6NLQ92738 828 aa7.23□□□□□ -1.25
SBNO1-202ENST00000420886 FAF1Q9UNN5 650 aaPredicted RBP7.23□□□□□ -1.25
SBNO1-202ENST00000420886 SNUPNO95149 360 aaKnown RBP7.23□□□□□ -1.25
SBNO1-202ENST00000420886 LMNAP02545 664 aaKnown RBP7.23□□□□□ -1.25
SBNO1-202ENST00000420886 PDE1CQ14123 709 aaPredicted RBP7.23□□□□□ -1.25
SBNO1-202ENST00000420886 KLHDC4Q8TBB5 520 aa7.23□□□□□ -1.25
SBNO1-202ENST00000420886 AOX1Q06278 1338 aa7.23□□□□□ -1.25
SBNO1-202ENST00000420886 ARHGAP5Q13017 1502 aa7.23□□□□□ -1.25
SBNO1-202ENST00000420886 MTIF2P46199 727 aaKnown RBP7.23□□□□□ -1.25
SBNO1-202ENST00000420886 DENND2CQ68D51 928 aa7.23□□□□□ -1.25
SBNO1-202ENST00000420886 IQCGQ9H095 443 aaKnown RBP7.23□□□□□ -1.25
SBNO1-202ENST00000420886 KLHL14Q9P2G3 628 aa7.23□□□□□ -1.25
SBNO1-202ENST00000420886 HMGB1P1B2RPK0 211 aaPredicted RBP7.23□□□□□ -1.25
SBNO1-202ENST00000420886 RUBCNQ92622 972 aa7.23□□□□□ -1.25
SBNO1-202ENST00000420886 VIPAS39Q9H9C1 493 aa7.23□□□□□ -1.25
SBNO1-202ENST00000420886 IL1RAPL2Q9NP60 686 aa7.23□□□□□ -1.25
SBNO1-202ENST00000420886 NOP2P46087 812 aaKnown RBP7.23□□□□□ -1.25
SBNO1-202ENST00000420886 NEUROD6Q96NK8 337 aa7.23□□□□□ -1.25
SBNO1-202ENST00000420886 ITGB1BP2Q9UKP3 347 aa7.23□□□□□ -1.25
SBNO1-202ENST00000420886 BMP15O95972 392 aa7.22□□□□□ -1.25
SBNO1-202ENST00000420886 HOMER3Q9NSC5 361 aa7.22□□□□□ -1.25
SBNO1-202ENST00000420886 SATB2Q9UPW6 733 aa7.22□□□□□ -1.25
SBNO1-202ENST00000420886 NCOA3Q9Y6Q9 1424 aa7.22□□□□□ -1.25
SBNO1-202ENST00000420886 ACTN4O43707 911 aaKnown RBP7.22□□□□□ -1.25
SBNO1-202ENST00000420886 GNPTABQ3T906 1256 aa7.22□□□□□ -1.25
SBNO1-202ENST00000420886 NAIF1Q69YI7 327 aaPredicted RBP7.22□□□□□ -1.25
SBNO1-202ENST00000420886 NECAB1Q8N987 351 aa7.22□□□□□ -1.25
SBNO1-202ENST00000420886 INF2Q27J81 1249 aa7.22□□□□□ -1.25
SBNO1-202ENST00000420886 CFAP73A6NFT4 308 aa7.22□□□□□ -1.25
SBNO1-202ENST00000420886 GOLGA8BA8MQT2 603 aa7.22□□□□□ -1.25
SBNO1-202ENST00000420886 KCNJ6P48051 423 aa7.22□□□□□ -1.25
SBNO1-202ENST00000420886 SLC8A3P57103 927 aa7.22□□□□□ -1.25
SBNO1-202ENST00000420886 GUCY1B3Q02153 619 aa7.22□□□□□ -1.25
SBNO1-202ENST00000420886 TTC39AQ5SRH9 613 aa7.22□□□□□ -1.25
SBNO1-202ENST00000420886 E9PCH4 1651 aa7.22□□□□□ -1.25
SBNO1-202ENST00000420886 FBXW10Q5XX13 1052 aa7.22□□□□□ -1.25
SBNO1-202ENST00000420886 VSIG1Q86XK7 387 aa7.22□□□□□ -1.25
SBNO1-202ENST00000420886 SYTL4Q96C24 671 aaPredicted RBP7.22□□□□□ -1.25
SBNO1-202ENST00000420886 FGD4Q96M96 766 aa7.22□□□□□ -1.25
SBNO1-202ENST00000420886 ST7Q9NRC1 585 aa7.22□□□□□ -1.25
SBNO1-202ENST00000420886 WWC3Q9ULE0 1092 aa7.22□□□□□ -1.25
SBNO1-202ENST00000420886 CHMLP26374 656 aa7.22□□□□□ -1.25
SBNO1-202ENST00000420886 HNRNPH1P31943 449 aaKnown RBP7.22□□□□□ -1.25
SBNO1-202ENST00000420886 MTX1Q13505 466 aa7.22□□□□□ -1.25
SBNO1-202ENST00000420886 PPP1R9AQ9ULJ8 1098 aa7.22□□□□□ -1.25
SBNO1-202ENST00000420886 TBC1D2BQ9UPU7 963 aa7.22□□□□□ -1.25
SBNO1-202ENST00000420886 SUN1O94901 812 aa7.22□□□□□ -1.25
SBNO1-202ENST00000420886 C1orf141Q5JVX7 400 aa7.22□□□□□ -1.25
SBNO1-202ENST00000420886 TXLNGQ9NUQ3 528 aa7.22□□□□□ -1.25
SBNO1-202ENST00000420886 IQGAP2Q13576 1575 aa7.22□□□□□ -1.25
SBNO1-202ENST00000420886 CTNNA1P35221 906 aaKnown RBP7.22□□□□□ -1.25
SBNO1-202ENST00000420886 GRAMD4Q6IC98 578 aa7.22□□□□□ -1.25
SBNO1-202ENST00000420886 FBXO41Q8TF61 875 aa7.22□□□□□ -1.25
SBNO1-202ENST00000420886 BMP2KQ9NSY1 1161 aaPredicted RBP7.22□□□□□ -1.25
SBNO1-202ENST00000420886 LAMC1P11047 1609 aa7.22□□□□□ -1.25
SBNO1-202ENST00000420886 TRPM1Q7Z4N2 1603 aa7.22□□□□□ -1.25
SBNO1-202ENST00000420886 ZNF131P52739 623 aa7.22□□□□□ -1.25
SBNO1-202ENST00000420886 JARID2Q92833 1246 aaPredicted RBP7.22□□□□□ -1.25
SBNO1-202ENST00000420886 MACROD2A1Z1Q3 448 aa7.21□□□□□ -1.25
SBNO1-202ENST00000420886 MEFVO15553 781 aaPredicted RBP7.21□□□□□ -1.25
SBNO1-202ENST00000420886 NME8Q8N427 588 aa7.21□□□□□ -1.25
SBNO1-202ENST00000420886 PDCD7Q8N8D1 485 aaKnown RBP7.21□□□□□ -1.25
SBNO1-202ENST00000420886 BRF1Q92994 677 aa7.21□□□□□ -1.25
SBNO1-202ENST00000420886 ABTB1Q969K4 478 aaPredicted RBP7.21□□□□□ -1.25
SBNO1-202ENST00000420886 KIAA1468Q9P260 1216 aa7.21□□□□□ -1.25
SBNO1-202ENST00000420886 IKBKGQ9Y6K9 419 aa7.21□□□□□ -1.25
SBNO1-202ENST00000420886 ADGRL1O94910 1474 aa7.21□□□□□ -1.25
SBNO1-202ENST00000420886 TCOF1Q13428 1488 aaKnown RBP7.21□□□□□ -1.25
SBNO1-202ENST00000420886 GAPVD1Q14C86 1478 aa7.21□□□□□ -1.25
SBNO1-202ENST00000420886 HNRNPCP07910 306 aaKnown RBP eCLIP7.21□□□□□ -1.256e-6■■■□□ 17
SBNO1-202ENST00000420886 PRPF4BQ13523 1007 aaKnown RBP7.21□□□□□ -1.25
SBNO1-202ENST00000420886 HSP90AA4PQ58FG1 418 aa7.21□□□□□ -1.25
SBNO1-202ENST00000420886 TRIM35Q9UPQ4 493 aa7.21□□□□□ -1.25
SBNO1-202ENST00000420886 SYNRGQ9UMZ2 1314 aa7.21□□□□□ -1.25
SBNO1-202ENST00000420886 ATP2A2P16615 1042 aaKnown RBP7.21□□□□□ -1.25
SBNO1-202ENST00000420886 NUP58Q9BVL2 599 aa7.21□□□□□ -1.25
SBNO1-202ENST00000420886 SEPT11Q9NVA2 429 aaKnown RBP7.21□□□□□ -1.25
SBNO1-202ENST00000420886 KIF24Q5T7B8 1368 aa7.21□□□□□ -1.26
SBNO1-202ENST00000420886 AMPD3Q01432 767 aa7.21□□□□□ -1.26
SBNO1-202ENST00000420886 MPHOSPH6Q99547 160 aaKnown RBP7.21□□□□□ -1.26
SBNO1-202ENST00000420886 MYH1P12882 1939 aa7.21□□□□□ -1.26
SBNO1-202ENST00000420886 MYH2Q9UKX2 1941 aa7.21□□□□□ -1.26
SBNO1-202ENST00000420886 MYH4Q9Y623 1939 aa7.21□□□□□ -1.26
SBNO1-202ENST00000420886 ZNF644Q9H582 1327 aaPredicted RBP7.21□□□□□ -1.26
SBNO1-202ENST00000420886 ZNF202O95125 648 aa7.21□□□□□ -1.26
SBNO1-202ENST00000420886 CCT2P78371 535 aaKnown RBP7.21□□□□□ -1.26
SBNO1-202ENST00000420886 AMOTQ4VCS5 1084 aa7.21□□□□□ -1.26
SBNO1-202ENST00000420886 SAMD1Q6SPF0 538 aaPredicted RBP7.21□□□□□ -1.26
SBNO1-202ENST00000420886 MLKLQ8NB16 471 aa7.21□□□□□ -1.26
SBNO1-202ENST00000420886 NR1D1P20393 614 aa7.21□□□□□ -1.26
SBNO1-202ENST00000420886 SSRP1Q08945 709 aaKnown RBP7.21□□□□□ -1.26
SBNO1-202ENST00000420886 NOX5Q96PH1 765 aa7.21□□□□□ -1.26
SBNO1-202ENST00000420886 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.21□□□□□ -1.262e-6■■■■■ 92.9
SBNO1-202ENST00000420886 ERCC6Q03468 1493 aa7.21□□□□□ -1.26
SBNO1-202ENST00000420886 SGSM2O43147 1006 aa7.21□□□□□ -1.26
SBNO1-202ENST00000420886 SWT1Q5T5J6 900 aaKnown RBP7.21□□□□□ -1.26
SBNO1-202ENST00000420886 TTC19Q6DKK2 380 aaPredicted RBP7.21□□□□□ -1.26
SBNO1-202ENST00000420886 TRIM47Q96LD4 638 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms