RNA–Protein interactions for RNA: ENST00000418909.6

SHROOM2-202, Transcript of shroom family member 2, humanhuman

TSL 1 (best) BASIC

Gene SHROOM2, Length 4,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM2-202ENST00000418909 GPCPD1Q9NPB8 672 aa12.94□□□□□ -0.34
SHROOM2-202ENST00000418909 CTAGE5O15320 804 aa12.94□□□□□ -0.34
SHROOM2-202ENST00000418909 RC3H1Q5TC82 1133 aaKnown RBP12.94□□□□□ -0.34
SHROOM2-202ENST00000418909 EAF2Q96CJ1 260 aaPredicted RBP12.94□□□□□ -0.34
SHROOM2-202ENST00000418909 DBNDD1Q9H9R9 158 aa12.94□□□□□ -0.34
SHROOM2-202ENST00000418909 SLC5A4Q9NY91 659 aa12.94□□□□□ -0.34
SHROOM2-202ENST00000418909 PTPRUQ92729 1446 aa12.94□□□□□ -0.34
SHROOM2-202ENST00000418909 EIF5P55010 431 aaKnown RBP12.94□□□□□ -0.34
SHROOM2-202ENST00000418909 KIF22Q14807 665 aa12.94□□□□□ -0.34
SHROOM2-202ENST00000418909 CHST3Q7LGC8 479 aa12.94□□□□□ -0.34
SHROOM2-202ENST00000418909 CHURC1Q8WUH1 139 aa12.94□□□□□ -0.34
SHROOM2-202ENST00000418909 ZNF592Q92610 1267 aa12.94□□□□□ -0.34
SHROOM2-202ENST00000418909 TMX3Q96JJ7 454 aa12.94□□□□□ -0.34
SHROOM2-202ENST00000418909 ATP10DQ9P241 1426 aa12.94□□□□□ -0.34
SHROOM2-202ENST00000418909 TRIM75PA6NK02 468 aa12.93□□□□□ -0.34
SHROOM2-202ENST00000418909 NCBP1Q09161 790 aaKnown RBP12.93□□□□□ -0.34
SHROOM2-202ENST00000418909 NOM1Q5C9Z4 860 aaKnown RBP12.93□□□□□ -0.34
SHROOM2-202ENST00000418909 MARCH10Q8NA82 808 aaPredicted RBP12.93□□□□□ -0.34
SHROOM2-202ENST00000418909 SLC16A10Q8TF71 515 aa12.93□□□□□ -0.34
SHROOM2-202ENST00000418909 DIP2AQ14689 1571 aa12.93□□□□□ -0.34
SHROOM2-202ENST00000418909 MED14O60244 1454 aa12.93□□□□□ -0.34
SHROOM2-202ENST00000418909 TCP10L2B9ZVM9 353 aa12.93□□□□□ -0.34
SHROOM2-202ENST00000418909 C21orf2O43822 256 aa12.93□□□□□ -0.34
SHROOM2-202ENST00000418909 PDE6AP16499 860 aa12.93□□□□□ -0.34
SHROOM2-202ENST00000418909 MRE11P49959 708 aa12.93□□□□□ -0.34
SHROOM2-202ENST00000418909 FSIP1Q8NA03 581 aa12.93□□□□□ -0.34
SHROOM2-202ENST00000418909 FBXO41Q8TF61 875 aa12.93□□□□□ -0.34
SHROOM2-202ENST00000418909 ZKSCAN3Q9BRR0 538 aa12.93□□□□□ -0.34
SHROOM2-202ENST00000418909 ANGEL1Q9UNK9 670 aaKnown RBP12.93□□□□□ -0.34
SHROOM2-202ENST00000418909 PSDA5PKW4 1024 aaPredicted RBP12.93□□□□□ -0.34
SHROOM2-202ENST00000418909 CCDC125Q86Z20 511 aa12.93□□□□□ -0.34
SHROOM2-202ENST00000418909 SYCP3Q8IZU3 236 aa12.93□□□□□ -0.34
SHROOM2-202ENST00000418909 COA1Q9GZY4 146 aa12.93□□□□□ -0.34
SHROOM2-202ENST00000418909 PATL2C9JE40 543 aaKnown RBP12.93□□□□□ -0.34
SHROOM2-202ENST00000418909 USP17L12C9JPN9 530 aa12.93□□□□□ -0.34
SHROOM2-202ENST00000418909 USP17L21D6R901 530 aa12.93□□□□□ -0.34
SHROOM2-202ENST00000418909 RAD17O75943 681 aa12.93□□□□□ -0.34
SHROOM2-202ENST00000418909 BTDP43251 543 aa12.93□□□□□ -0.34
SHROOM2-202ENST00000418909 CCDC129Q6ZRS4 1044 aa12.93□□□□□ -0.34
SHROOM2-202ENST00000418909 TNPO1Q92973 898 aaKnown RBP12.93□□□□□ -0.34
SHROOM2-202ENST00000418909 BSDC1Q9NW68 430 aaPredicted RBP12.93□□□□□ -0.34
SHROOM2-202ENST00000418909 PNMA2Q9UL42 364 aa12.93□□□□□ -0.34
SHROOM2-202ENST00000418909 R3HDM1Q15032 1099 aaKnown RBP12.92□□□□□ -0.34
SHROOM2-202ENST00000418909 LZTS2Q9BRK4 669 aa12.92□□□□□ -0.34
SHROOM2-202ENST00000418909 TFIP11Q9UBB9 837 aaKnown RBP12.92□□□□□ -0.34
SHROOM2-202ENST00000418909 GPHNQ9NQX3 736 aaPredicted RBP12.92□□□□□ -0.34
SHROOM2-202ENST00000418909 ANO10Q9NW15 660 aa12.92□□□□□ -0.34
SHROOM2-202ENST00000418909 FER1L4A9Z1Z3 1794 aa12.92□□□□□ -0.34
SHROOM2-202ENST00000418909 BACH1O14867 736 aa12.92□□□□□ -0.34
SHROOM2-202ENST00000418909 PHKA1P46020 1223 aa12.92□□□□□ -0.34
SHROOM2-202ENST00000418909 TFAP4Q01664 338 aa12.92□□□□□ -0.34
SHROOM2-202ENST00000418909 APOBRQ0VD83 1088 aa12.92□□□□□ -0.34
SHROOM2-202ENST00000418909 BRIP1Q9BX63 1249 aa12.92□□□□□ -0.34
SHROOM2-202ENST00000418909 NRXN1Q9ULB1 1477 aa12.92□□□□□ -0.34
SHROOM2-202ENST00000418909 PREX1Q8TCU6 1659 aa12.92□□□□□ -0.34
SHROOM2-202ENST00000418909 SPDYE4A6NLX3 237 aa12.92□□□□□ -0.34
SHROOM2-202ENST00000418909 FKBP15Q5T1M5 1219 aa12.92□□□□□ -0.34
SHROOM2-202ENST00000418909 KRT79Q5XKE5 535 aa12.92□□□□□ -0.34
SHROOM2-202ENST00000418909 KLHL10Q6JEL2 608 aa12.92□□□□□ -0.34
SHROOM2-202ENST00000418909 CPXCR1Q8N123 301 aa12.92□□□□□ -0.34
SHROOM2-202ENST00000418909 PUS3Q9BZE2 481 aaKnown RBP12.92□□□□□ -0.34
SHROOM2-202ENST00000418909 USP17L3A6NCW0 530 aa12.91□□□□□ -0.34
SHROOM2-202ENST00000418909 USP17L4A6NCW7 530 aa12.91□□□□□ -0.34
SHROOM2-202ENST00000418909 SGSM2O43147 1006 aa12.91□□□□□ -0.34
SHROOM2-202ENST00000418909 USP17L1Q7RTZ2 530 aa12.91□□□□□ -0.34
SHROOM2-202ENST00000418909 OTUD7AQ8TE49 926 aaPredicted RBP12.91□□□□□ -0.34
SHROOM2-202ENST00000418909 CCP110O43303 1012 aa12.91□□□□□ -0.34
SHROOM2-202ENST00000418909 HSP90AA2PQ14568 343 aaPredicted RBP12.91□□□□□ -0.34
SHROOM2-202ENST00000418909 RUFY3Q7L099 469 aa12.91□□□□□ -0.34
SHROOM2-202ENST00000418909 USP37Q86T82 979 aa12.91□□□□□ -0.34
SHROOM2-202ENST00000418909 TTLL11Q8NHH1 800 aa12.91□□□□□ -0.34
SHROOM2-202ENST00000418909 KCNG4Q8TDN1 519 aa12.91□□□□□ -0.34
SHROOM2-202ENST00000418909 CCDC17Q96LX7 622 aa12.91□□□□□ -0.34
SHROOM2-202ENST00000418909 TBC1D2Q9BYX2 928 aa12.91□□□□□ -0.34
SHROOM2-202ENST00000418909 DDX19AQ9NUU7 478 aaKnown RBP12.91□□□□□ -0.34
SHROOM2-202ENST00000418909 MCM4P33991 863 aa12.91□□□□□ -0.34
SHROOM2-202ENST00000418909 KRT2P35908 639 aa12.91□□□□□ -0.34
SHROOM2-202ENST00000418909 HLFQ16534 295 aa12.91□□□□□ -0.34
SHROOM2-202ENST00000418909 FAM227BQ96M60 508 aa12.91□□□□□ -0.34
SHROOM2-202ENST00000418909 NOD1Q9Y239 953 aa12.91□□□□□ -0.34
SHROOM2-202ENST00000418909 CPS1P31327 1500 aa12.91□□□□□ -0.34
SHROOM2-202ENST00000418909 AKNAD1Q5T1N1 836 aa12.9□□□□□ -0.34
SHROOM2-202ENST00000418909 NSMFQ6X4W1 530 aa12.9□□□□□ -0.34
SHROOM2-202ENST00000418909 ARMC9Q7Z3E5 817 aa12.9□□□□□ -0.34
SHROOM2-202ENST00000418909 BICD1Q96G01 975 aa12.9□□□□□ -0.34
SHROOM2-202ENST00000418909 DSCC1Q9BVC3 393 aa12.9□□□□□ -0.34
SHROOM2-202ENST00000418909 H7C1W4 665 aa12.9□□□□□ -0.34
SHROOM2-202ENST00000418909 UBE3CQ15386 1083 aa12.9□□□□□ -0.34
SHROOM2-202ENST00000418909 CERKLQ49MI3 558 aaPredicted RBP12.9□□□□□ -0.34
SHROOM2-202ENST00000418909 HAUS7Q99871 368 aa12.9□□□□□ -0.34
SHROOM2-202ENST00000418909 ATP8A2Q9NTI2 1148 aa12.9□□□□□ -0.34
SHROOM2-202ENST00000418909 SEPT11Q9NVA2 429 aaKnown RBP12.9□□□□□ -0.34
SHROOM2-202ENST00000418909 NDUFB9Q9Y6M9 179 aa12.9□□□□□ -0.34
SHROOM2-202ENST00000418909 FCHSD1Q86WN1 690 aa12.9□□□□□ -0.34
SHROOM2-202ENST00000418909 NFIXQ14938 502 aa12.89□□□□□ -0.35
SHROOM2-202ENST00000418909 CLIP2Q9UDT6 1046 aa12.89□□□□□ -0.35
SHROOM2-202ENST00000418909 MYO3BQ8WXR4 1341 aa12.89□□□□□ -0.35
SHROOM2-202ENST00000418909 QRICH2Q9H0J4 1663 aa12.89□□□□□ -0.35
SHROOM2-202ENST00000418909 ZNF397Q8NF99 534 aaPredicted RBP12.89□□□□□ -0.35
SHROOM2-202ENST00000418909 CPDO75976 1380 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms