RNA–Protein interactions for RNA: ENST00000418454.2

HMGA1P6-201, Transcript of high mobility group AT-hook 1 pseudogene 6, humanhuman

BASIC

Gene HMGA1P6, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P6-201ENST00000418454 ZNF384Q8TF68 577 aa11.99□□□□□ -0.49
HMGA1P6-201ENST00000418454 KRT23Q9C075 422 aa11.99□□□□□ -0.49
HMGA1P6-201ENST00000418454 MROH7-TTC4A0A0A0MT08 1334 aa11.99□□□□□ -0.49
HMGA1P6-201ENST00000418454 CACNA1SQ13698 1873 aa11.98□□□□□ -0.49
HMGA1P6-201ENST00000418454 C21orf2O43822 256 aa11.98□□□□□ -0.49
HMGA1P6-201ENST00000418454 CHGBP05060 677 aa11.98□□□□□ -0.49
HMGA1P6-201ENST00000418454 MCM5P33992 734 aa11.98□□□□□ -0.49
HMGA1P6-201ENST00000418454 GTF2IP78347 998 aa11.98□□□□□ -0.49
HMGA1P6-201ENST00000418454 LCORLQ8N3X6 602 aa11.98□□□□□ -0.49
HMGA1P6-201ENST00000418454 STAG1Q8WVM7 1258 aa11.98□□□□□ -0.49
HMGA1P6-201ENST00000418454 ARMT1Q9H993 441 aa11.98□□□□□ -0.49
HMGA1P6-201ENST00000418454 ZNF287Q9HBT7 754 aa11.98□□□□□ -0.49
HMGA1P6-201ENST00000418454 ARPP21Q9UBL0 812 aaPredicted RBP11.98□□□□□ -0.49
HMGA1P6-201ENST00000418454 SERPINA10Q9UK55 444 aa11.98□□□□□ -0.49
HMGA1P6-201ENST00000418454 SLX4Q8IY92 1834 aa11.97□□□□□ -0.49
HMGA1P6-201ENST00000418454 MAST2Q6P0Q8 1798 aa11.97□□□□□ -0.49
HMGA1P6-201ENST00000418454 RIMBP2O15034 1052 aa11.97□□□□□ -0.49
HMGA1P6-201ENST00000418454 ECE2O60344 883 aa11.97□□□□□ -0.49
HMGA1P6-201ENST00000418454 ADCK5Q3MIX3 580 aa11.97□□□□□ -0.49
HMGA1P6-201ENST00000418454 DACT2Q5SW24 774 aa11.97□□□□□ -0.49
HMGA1P6-201ENST00000418454 AMOTL1Q8IY63 956 aa11.97□□□□□ -0.49
HMGA1P6-201ENST00000418454 ZNF274Q96GC6 653 aaPredicted RBP11.97□□□□□ -0.49
HMGA1P6-201ENST00000418454 TMX3Q96JJ7 454 aa11.97□□□□□ -0.49
HMGA1P6-201ENST00000418454 TMEM87BQ96K49 555 aa11.97□□□□□ -0.49
HMGA1P6-201ENST00000418454 ZDHHC15Q96MV8 337 aa11.97□□□□□ -0.49
HMGA1P6-201ENST00000418454 MKRN1Q9UHC7 482 aaKnown RBP11.97□□□□□ -0.49
HMGA1P6-201ENST00000418454 ZNRF3Q9ULT6 936 aa11.97□□□□□ -0.49
HMGA1P6-201ENST00000418454 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.97□□□□□ -0.49
HMGA1P6-201ENST00000418454 PPIP5K2O43314 1243 aa11.96□□□□□ -0.49
HMGA1P6-201ENST00000418454 VIL1P09327 827 aaKnown RBP11.96□□□□□ -0.49
HMGA1P6-201ENST00000418454 DDIT3P35638 169 aa11.96□□□□□ -0.49
HMGA1P6-201ENST00000418454 TDO2P48775 406 aa11.96□□□□□ -0.49
HMGA1P6-201ENST00000418454 RCAN1P53805 252 aa11.96□□□□□ -0.49
HMGA1P6-201ENST00000418454 PPP2R5BQ15173 497 aa11.96□□□□□ -0.49
HMGA1P6-201ENST00000418454 SLFNL1Q499Z3 407 aa11.96□□□□□ -0.49
HMGA1P6-201ENST00000418454 CCDC178Q5BJE1 867 aa11.96□□□□□ -0.49
HMGA1P6-201ENST00000418454 AKNAD1Q5T1N1 836 aa11.96□□□□□ -0.49
HMGA1P6-201ENST00000418454 RALYLQ86SE5 291 aaKnown RBP11.96□□□□□ -0.49
HMGA1P6-201ENST00000418454 ADGRA1Q86SQ6 560 aa11.96□□□□□ -0.49
HMGA1P6-201ENST00000418454 AGBL3Q8NEM8 1001 aa11.96□□□□□ -0.49
HMGA1P6-201ENST00000418454 CHMP5Q9NZZ3 219 aa11.96□□□□□ -0.49
HMGA1P6-201ENST00000418454 CCDC88AQ3V6T2 1871 aa11.95□□□□□ -0.5
HMGA1P6-201ENST00000418454 HSP90AA1P07900 732 aaKnown RBP11.95□□□□□ -0.5
HMGA1P6-201ENST00000418454 IARSP41252 1262 aaKnown RBP11.95□□□□□ -0.5
HMGA1P6-201ENST00000418454 LIFRP42702 1097 aa11.95□□□□□ -0.5
HMGA1P6-201ENST00000418454 AK2P54819 239 aa11.95□□□□□ -0.5
HMGA1P6-201ENST00000418454 NUCB2P80303 420 aa11.95□□□□□ -0.5
HMGA1P6-201ENST00000418454 MFSD6Q6ZSS7 791 aa11.95□□□□□ -0.5
HMGA1P6-201ENST00000418454 TEKT1Q969V4 418 aa11.95□□□□□ -0.5
HMGA1P6-201ENST00000418454 LLPHQ9BRT6 129 aaKnown RBP11.95□□□□□ -0.5
HMGA1P6-201ENST00000418454 UPF3BQ9BZI7 483 aaKnown RBP11.95□□□□□ -0.5
HMGA1P6-201ENST00000418454 TAOK3Q9H2K8 898 aa11.95□□□□□ -0.5
HMGA1P6-201ENST00000418454 EPB41L4AQ9HCS5 686 aaPredicted RBP11.95□□□□□ -0.5
HMGA1P6-201ENST00000418454 DCP1AQ9NPI6 582 aaPredicted RBP11.95□□□□□ -0.5
HMGA1P6-201ENST00000418454 MYH13Q9UKX3 1938 aa11.95□□□□□ -0.5
HMGA1P6-201ENST00000418454 ORC4O43929 436 aa11.94□□□□□ -0.5
HMGA1P6-201ENST00000418454 CD2BP2O95400 341 aaKnown RBP11.94□□□□□ -0.5
HMGA1P6-201ENST00000418454 RPS12P25398 132 aaKnown RBP11.94□□□□□ -0.5
HMGA1P6-201ENST00000418454 PPARAQ07869 468 aa11.94□□□□□ -0.5
HMGA1P6-201ENST00000418454 SART3Q15020 963 aaKnown RBP11.94□□□□□ -0.5
HMGA1P6-201ENST00000418454 TNIP1Q15025 636 aa11.94□□□□□ -0.5
HMGA1P6-201ENST00000418454 DOK7Q18PE1 504 aa11.94□□□□□ -0.5
HMGA1P6-201ENST00000418454 CTR9Q6PD62 1173 aa11.94□□□□□ -0.5
HMGA1P6-201ENST00000418454 OLFM4Q6UX06 510 aa11.94□□□□□ -0.5
HMGA1P6-201ENST00000418454 MB21D2Q8IYB1 491 aaPredicted RBP11.94□□□□□ -0.5
HMGA1P6-201ENST00000418454 LARGE2Q8N3Y3 721 aa11.94□□□□□ -0.5
HMGA1P6-201ENST00000418454 MIGA1Q8NAN2 632 aa11.94□□□□□ -0.5
HMGA1P6-201ENST00000418454 MTMR14Q8NCE2 650 aa11.94□□□□□ -0.5
HMGA1P6-201ENST00000418454 JDP2Q8WYK2 163 aa11.94□□□□□ -0.5
HMGA1P6-201ENST00000418454 GPR101Q96P66 508 aaPredicted RBP11.94□□□□□ -0.5
HMGA1P6-201ENST00000418454 AATFQ9NY61 560 aaKnown RBP eCLIP11.94□□□□□ -0.5
HMGA1P6-201ENST00000418454 TTF2Q9UNY4 1162 aaKnown RBP11.94□□□□□ -0.5
HMGA1P6-201ENST00000418454 DHX16O60231 1041 aaKnown RBP11.93□□□□□ -0.5
HMGA1P6-201ENST00000418454 BTDP43251 543 aa11.93□□□□□ -0.5
HMGA1P6-201ENST00000418454 RHBDL3P58872 404 aa11.93□□□□□ -0.5
HMGA1P6-201ENST00000418454 PDE4BQ07343 736 aa11.93□□□□□ -0.5
HMGA1P6-201ENST00000418454 AOC3Q16853 763 aa11.93□□□□□ -0.5
HMGA1P6-201ENST00000418454 C12orf60Q5U649 245 aa11.93□□□□□ -0.5
HMGA1P6-201ENST00000418454 FKBP1CQ5VVH2 108 aa11.93□□□□□ -0.5
HMGA1P6-201ENST00000418454 RSBN1LQ6PCB5 846 aaPredicted RBP11.93□□□□□ -0.5
HMGA1P6-201ENST00000418454 STOX1Q6ZVD7 989 aa11.93□□□□□ -0.5
HMGA1P6-201ENST00000418454 TTC6Q86TZ1 520 aa11.93□□□□□ -0.5
HMGA1P6-201ENST00000418454 SGMS1Q86VZ5 419 aa11.93□□□□□ -0.5
HMGA1P6-201ENST00000418454 NIM1KQ8IY84 436 aa11.93□□□□□ -0.5
HMGA1P6-201ENST00000418454 CERS5Q8N5B7 392 aa11.93□□□□□ -0.5
HMGA1P6-201ENST00000418454 ESR2Q92731 530 aa11.93□□□□□ -0.5
HMGA1P6-201ENST00000418454 IDI2Q9BXS1 227 aa11.93□□□□□ -0.5
HMGA1P6-201ENST00000418454 HDAC9Q9UKV0 1011 aa11.93□□□□□ -0.5
HMGA1P6-201ENST00000418454 ROBO3Q96MS0 1386 aa11.92□□□□□ -0.5
HMGA1P6-201ENST00000418454 PRKAB2O43741 272 aa11.92□□□□□ -0.5
HMGA1P6-201ENST00000418454 USP5P45974 858 aa11.92□□□□□ -0.5
HMGA1P6-201ENST00000418454 DYNLL1P63167 89 aaKnown RBP11.92□□□□□ -0.5
HMGA1P6-201ENST00000418454 TOB2Q14106 344 aaPredicted RBP11.92□□□□□ -0.5
HMGA1P6-201ENST00000418454 OGFOD1Q8N543 542 aa11.92□□□□□ -0.5
HMGA1P6-201ENST00000418454 GMLQ99445 158 aa11.92□□□□□ -0.5
HMGA1P6-201ENST00000418454 DHX36Q9H2U1 1008 aaKnown RBP11.92□□□□□ -0.5
HMGA1P6-201ENST00000418454 DBNDD1Q9H9R9 158 aa11.92□□□□□ -0.5
HMGA1P6-201ENST00000418454 DAGLAQ9Y4D2 1042 aa11.92□□□□□ -0.5
HMGA1P6-201ENST00000418454 PSDA5PKW4 1024 aaPredicted RBP11.91□□□□□ -0.5
HMGA1P6-201ENST00000418454 USP17L12C9JPN9 530 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms