RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 PDE6AP16499 860 aa16.78■□□□□ 0.28
HDAC9-208ENST00000417496 CMA1P23946 247 aa16.78■□□□□ 0.28
HDAC9-208ENST00000417496 CTDSPL2Q05D32 466 aa16.78■□□□□ 0.28
HDAC9-208ENST00000417496 SPECC1Q5M775 1068 aa16.78■□□□□ 0.28
HDAC9-208ENST00000417496 SHC4Q6S5L8 630 aa16.78■□□□□ 0.28
HDAC9-208ENST00000417496 NFXL1Q6ZNB6 911 aa16.78■□□□□ 0.28
HDAC9-208ENST00000417496 SMAP1Q8IYB5 467 aaPredicted RBP16.78■□□□□ 0.28
HDAC9-208ENST00000417496 VGLL2Q8N8G2 317 aa16.78■□□□□ 0.28
HDAC9-208ENST00000417496 PRDM4Q9UKN5 801 aa16.78■□□□□ 0.28
HDAC9-208ENST00000417496 ZNF215Q9UL58 517 aaPredicted RBP16.78■□□□□ 0.28
HDAC9-208ENST00000417496 DCCP43146 1447 aa16.78■□□□□ 0.28
HDAC9-208ENST00000417496 SH2B2O14492 632 aaPredicted RBP16.78■□□□□ 0.28
HDAC9-208ENST00000417496 NEMFO60524 1076 aa16.78■□□□□ 0.28
HDAC9-208ENST00000417496 PDE8BO95263 885 aa16.78■□□□□ 0.28
HDAC9-208ENST00000417496 ZSCAN20P17040 1043 aaPredicted RBP16.78■□□□□ 0.28
HDAC9-208ENST00000417496 CCDC82Q8N4S0 544 aa16.78■□□□□ 0.28
HDAC9-208ENST00000417496 ZMYM6O95789 1325 aa16.78■□□□□ 0.28
HDAC9-208ENST00000417496 RANBP6O60518 1105 aaKnown RBP16.77■□□□□ 0.28
HDAC9-208ENST00000417496 SYKP43405 635 aa16.77■□□□□ 0.28
HDAC9-208ENST00000417496 PNOCQ13519 176 aa16.77■□□□□ 0.28
HDAC9-208ENST00000417496 TACC3Q9Y6A5 838 aa16.77■□□□□ 0.28
HDAC9-208ENST00000417496 UBR2Q8IWV8 1755 aa16.77■□□□□ 0.28
HDAC9-208ENST00000417496 KAT6BQ8WYB5 2073 aa16.77■□□□□ 0.28
HDAC9-208ENST00000417496 NPHP1O15259 732 aa16.77■□□□□ 0.28
HDAC9-208ENST00000417496 IGSF3O75054 1194 aa16.77■□□□□ 0.28
HDAC9-208ENST00000417496 NLRP12P59046 1061 aa16.77■□□□□ 0.28
HDAC9-208ENST00000417496 E4F1Q66K89 784 aaPredicted RBP16.77■□□□□ 0.28
HDAC9-208ENST00000417496 IGDCC4Q8TDY8 1250 aa16.77■□□□□ 0.28
HDAC9-208ENST00000417496 FAM217BQ9NTX9 383 aaPredicted RBP16.77■□□□□ 0.28
HDAC9-208ENST00000417496 ZBTB1Q9Y2K1 713 aa16.77■□□□□ 0.28
HDAC9-208ENST00000417496 HSP90AA4PQ58FG1 418 aa16.76■□□□□ 0.27
HDAC9-208ENST00000417496 CMTR1Q8N1G2 835 aaKnown RBP16.76■□□□□ 0.27
HDAC9-208ENST00000417496 AIDAQ96BJ3 306 aa16.76■□□□□ 0.27
HDAC9-208ENST00000417496 ZKSCAN3Q9BRR0 538 aa16.76■□□□□ 0.27
HDAC9-208ENST00000417496 HSD3B7Q9H2F3 369 aa16.76■□□□□ 0.27
HDAC9-208ENST00000417496 STRBPQ96SI9 672 aaKnown RBP16.76■□□□□ 0.27
HDAC9-208ENST00000417496 ZSWIM5Q9P217 1185 aa16.76■□□□□ 0.27
HDAC9-208ENST00000417496 ZBTB43O43298 467 aa16.75■□□□□ 0.27
HDAC9-208ENST00000417496 PRKAB2O43741 272 aa16.75■□□□□ 0.27
HDAC9-208ENST00000417496 GUCY1A2P33402 732 aa16.75■□□□□ 0.27
HDAC9-208ENST00000417496 PTPAQ15257 358 aa16.75■□□□□ 0.27
HDAC9-208ENST00000417496 NTRK3Q16288 839 aa16.75■□□□□ 0.27
HDAC9-208ENST00000417496 TMEM67Q5HYA8 995 aa16.75■□□□□ 0.27
HDAC9-208ENST00000417496 DPF2Q92785 391 aa16.75■□□□□ 0.27
HDAC9-208ENST00000417496 OSBPL5Q9H0X9 879 aaPredicted RBP16.75■□□□□ 0.27
HDAC9-208ENST00000417496 LY9Q9HBG7 655 aa16.75■□□□□ 0.27
HDAC9-208ENST00000417496 SLAIN2Q9P270 581 aa16.75■□□□□ 0.27
HDAC9-208ENST00000417496 PARP4Q9UKK3 1724 aaKnown RBP16.75■□□□□ 0.27
HDAC9-208ENST00000417496 SPEF2Q9C093 1822 aa16.75■□□□□ 0.27
HDAC9-208ENST00000417496 TCRBV5S4A2TA0A5A2 114 aa16.75■□□□□ 0.27
HDAC9-208ENST00000417496 IARSP41252 1262 aaKnown RBP16.75■□□□□ 0.27
HDAC9-208ENST00000417496 GOLGA8FQ08AF8 430 aa16.75■□□□□ 0.27
HDAC9-208ENST00000417496 GOLGA8DPQ0D2H9 430 aa16.75■□□□□ 0.27
HDAC9-208ENST00000417496 LONRF3Q496Y0 759 aa16.75■□□□□ 0.27
HDAC9-208ENST00000417496 RRP12Q5JTH9 1297 aaKnown RBP16.75■□□□□ 0.27
HDAC9-208ENST00000417496 FOXP4Q8IVH2 680 aaPredicted RBP16.75■□□□□ 0.27
HDAC9-208ENST00000417496 MAGEB6Q8N7X4 407 aa16.75■□□□□ 0.27
HDAC9-208ENST00000417496 MAP3K14Q99558 947 aa16.75■□□□□ 0.27
HDAC9-208ENST00000417496 SLC26A6Q9BXS9 759 aa16.75■□□□□ 0.27
HDAC9-208ENST00000417496 ARMT1Q9H993 441 aa16.75■□□□□ 0.27
HDAC9-208ENST00000417496 EPB41L4AQ9HCS5 686 aaPredicted RBP16.75■□□□□ 0.27
HDAC9-208ENST00000417496 FOXN1O15353 648 aa16.74■□□□□ 0.27
HDAC9-208ENST00000417496 GSDMDP57764 484 aa16.74■□□□□ 0.27
HDAC9-208ENST00000417496 UBE3CQ15386 1083 aa16.74■□□□□ 0.27
HDAC9-208ENST00000417496 ZHX1Q9UKY1 873 aaPredicted RBP16.74■□□□□ 0.27
HDAC9-208ENST00000417496 UBN2Q6ZU65 1347 aa16.74■□□□□ 0.27
HDAC9-208ENST00000417496 GOLGA8AA7E2F4 631 aa16.74■□□□□ 0.27
HDAC9-208ENST00000417496 FANCCQ00597 558 aa16.74■□□□□ 0.27
HDAC9-208ENST00000417496 TTF1Q15361 905 aaPredicted RBP16.74■□□□□ 0.27
HDAC9-208ENST00000417496 BPIFA3Q9BQP9 254 aa16.74■□□□□ 0.27
HDAC9-208ENST00000417496 TOMM22Q9NS69 142 aa16.74■□□□□ 0.27
HDAC9-208ENST00000417496 MBD4O95243 580 aa16.73■□□□□ 0.27
HDAC9-208ENST00000417496 CYP19A1P11511 503 aaPredicted RBP16.73■□□□□ 0.27
HDAC9-208ENST00000417496 SFPQP23246 707 aaKnown RBP eCLIP16.73■□□□□ 0.27
HDAC9-208ENST00000417496 GRIN1Q05586 938 aa16.73■□□□□ 0.27
HDAC9-208ENST00000417496 TEX13AQ9BXU3 409 aaPredicted RBP16.73■□□□□ 0.27
HDAC9-208ENST00000417496 KCNJ14Q9UNX9 436 aa16.73■□□□□ 0.27
HDAC9-208ENST00000417496 WDR19Q8NEZ3 1342 aa16.73■□□□□ 0.27
HDAC9-208ENST00000417496 CDHR2Q9BYE9 1310 aa16.73■□□□□ 0.27
HDAC9-208ENST00000417496 BTBD18B2RXH4 712 aa16.73■□□□□ 0.27
HDAC9-208ENST00000417496 IFIT3O14879 490 aaKnown RBP16.73■□□□□ 0.27
HDAC9-208ENST00000417496 RASGRF1Q13972 1273 aa16.73■□□□□ 0.27
HDAC9-208ENST00000417496 IFNL3Q8IZI9 196 aa16.73■□□□□ 0.27
HDAC9-208ENST00000417496 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.73■□□□□ 0.27
HDAC9-208ENST00000417496 HPSEQ9Y251 543 aa16.73■□□□□ 0.27
HDAC9-208ENST00000417496 SOS2Q07890 1332 aaPredicted RBP16.72■□□□□ 0.27
HDAC9-208ENST00000417496 METTL16Q86W50 562 aaKnown RBP16.72■□□□□ 0.27
HDAC9-208ENST00000417496 SPATA5Q8NB90 893 aa16.72■□□□□ 0.27
HDAC9-208ENST00000417496 KIF18AQ8NI77 898 aa16.72■□□□□ 0.27
HDAC9-208ENST00000417496 PPP1R13BQ96KQ4 1090 aa16.72■□□□□ 0.27
HDAC9-208ENST00000417496 NAPBQ9H115 298 aa16.72■□□□□ 0.27
HDAC9-208ENST00000417496 SEC31BQ9NQW1 1179 aa16.72■□□□□ 0.27
HDAC9-208ENST00000417496 IMPACTQ9P2X3 320 aa16.72■□□□□ 0.27
HDAC9-208ENST00000417496 SLC12A7Q9Y666 1083 aa16.72■□□□□ 0.27
HDAC9-208ENST00000417496 CDKL5O76039 1030 aa16.72■□□□□ 0.27
HDAC9-208ENST00000417496 SYT10Q6XYQ8 523 aa16.72■□□□□ 0.27
HDAC9-208ENST00000417496 LRRN4CLQ8ND94 238 aa16.72■□□□□ 0.27
HDAC9-208ENST00000417496 ABCC12Q96J65 1359 aa16.72■□□□□ 0.27
HDAC9-208ENST00000417496 AKAP11Q9UKA4 1901 aa16.72■□□□□ 0.27
HDAC9-208ENST00000417496 A0A0G2JS52 829 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms