RNA–Protein interactions for RNA: ENST00000416982.1

LINC01287-201, Transcript of long intergenic non-protein coding RNA 1287, humanhuman

TSL 2 BASIC

Gene LINC01287, Length 2,624 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01287-201ENST00000416982 RFX5P48382 616 aaPredicted RBP11.74□□□□□ -0.53
LINC01287-201ENST00000416982 STK3Q13188 491 aa11.74□□□□□ -0.53
LINC01287-201ENST00000416982 LONRF2Q1L5Z9 754 aa11.74□□□□□ -0.53
LINC01287-201ENST00000416982 FCHSD1Q86WN1 690 aa11.74□□□□□ -0.53
LINC01287-201ENST00000416982 MPHOSPH8Q99549 860 aa11.74□□□□□ -0.53
LINC01287-201ENST00000416982 PUS3Q9BZE2 481 aaKnown RBP11.74□□□□□ -0.53
LINC01287-201ENST00000416982 FTOQ9C0B1 505 aaKnown RBP eCLIP11.74□□□□□ -0.53
LINC01287-201ENST00000416982 MRFAP1Q9Y605 127 aa11.74□□□□□ -0.53
LINC01287-201ENST00000416982 NHSL1Q5SYE7 1610 aa11.74□□□□□ -0.53
LINC01287-201ENST00000416982 SPATA31A1Q5TZJ5 1347 aa11.74□□□□□ -0.53
LINC01287-201ENST00000416982 VWA3AA6NCI4 1184 aa11.73□□□□□ -0.53
LINC01287-201ENST00000416982 H7C1W4 665 aa11.73□□□□□ -0.53
LINC01287-201ENST00000416982 TIMM10P62072 90 aa11.73□□□□□ -0.53
LINC01287-201ENST00000416982 NCAPHQ15003 741 aa11.73□□□□□ -0.53
LINC01287-201ENST00000416982 DPCR1Q3MIW9 517 aa11.73□□□□□ -0.53
LINC01287-201ENST00000416982 LEKR1Q6ZMV7 388 aa11.73□□□□□ -0.53
LINC01287-201ENST00000416982 FAM177A1Q8N128 213 aaPredicted RBP11.73□□□□□ -0.53
LINC01287-201ENST00000416982 ERCC4Q92889 916 aaPredicted RBP11.73□□□□□ -0.53
LINC01287-201ENST00000416982 NEDD4P46934 1319 aa11.73□□□□□ -0.53
LINC01287-201ENST00000416982 EIF3CLB5ME19 914 aaKnown RBP11.73□□□□□ -0.53
LINC01287-201ENST00000416982 CEBPZQ03701 1054 aaKnown RBP11.73□□□□□ -0.53
LINC01287-201ENST00000416982 PPP2R3AQ06190 1150 aa11.73□□□□□ -0.53
LINC01287-201ENST00000416982 LRRC24Q50LG9 513 aa11.73□□□□□ -0.53
LINC01287-201ENST00000416982 FOXR1Q6PIV2 292 aa11.73□□□□□ -0.53
LINC01287-201ENST00000416982 FMR1NBQ8N0W7 255 aaPredicted RBP11.73□□□□□ -0.53
LINC01287-201ENST00000416982 FSIP1Q8NA03 581 aa11.73□□□□□ -0.53
LINC01287-201ENST00000416982 EVI5LQ96CN4 794 aa11.73□□□□□ -0.53
LINC01287-201ENST00000416982 FAM227BQ96M60 508 aa11.73□□□□□ -0.53
LINC01287-201ENST00000416982 EIF3CQ99613 913 aaKnown RBP11.73□□□□□ -0.53
LINC01287-201ENST00000416982 HDAC5Q9UQL6 1122 aa11.73□□□□□ -0.53
LINC01287-201ENST00000416982 KCPQ6ZWJ8 1503 aa11.73□□□□□ -0.53
LINC01287-201ENST00000416982 CCDC151A5D8V7 595 aa11.73□□□□□ -0.53
LINC01287-201ENST00000416982 CYP19A1P11511 503 aaPredicted RBP11.73□□□□□ -0.53
LINC01287-201ENST00000416982 CORO7P57737 925 aa11.73□□□□□ -0.53
LINC01287-201ENST00000416982 JAKMIP3Q5VZ66 844 aa11.73□□□□□ -0.53
LINC01287-201ENST00000416982 MSL3Q8N5Y2 521 aaKnown RBP11.73□□□□□ -0.53
LINC01287-201ENST00000416982 NEUROD6Q96NK8 337 aa11.73□□□□□ -0.53
LINC01287-201ENST00000416982 ABCA3Q99758 1704 aa11.73□□□□□ -0.53
LINC01287-201ENST00000416982 MED23Q9ULK4 1368 aa11.72□□□□□ -0.53
LINC01287-201ENST00000416982 H3BQV1 296 aa11.72□□□□□ -0.53
LINC01287-201ENST00000416982 CPP00450 1065 aa11.72□□□□□ -0.53
LINC01287-201ENST00000416982 APOBRQ0VD83 1088 aa11.72□□□□□ -0.53
LINC01287-201ENST00000416982 NMIQ13287 307 aaPredicted RBP11.72□□□□□ -0.53
LINC01287-201ENST00000416982 BRD3Q15059 726 aa11.72□□□□□ -0.53
LINC01287-201ENST00000416982 IFFO2Q5TF58 517 aa11.72□□□□□ -0.53
LINC01287-201ENST00000416982 SUGP1Q8IWZ8 645 aaKnown RBP11.72□□□□□ -0.53
LINC01287-201ENST00000416982 USP28Q96RU2 1077 aa11.72□□□□□ -0.53
LINC01287-201ENST00000416982 DBNDD2Q9BQY9 259 aa11.72□□□□□ -0.53
LINC01287-201ENST00000416982 RNF216Q9NWF9 866 aaPredicted RBP11.72□□□□□ -0.53
LINC01287-201ENST00000416982 DBNLQ9UJU6 430 aaKnown RBP11.72□□□□□ -0.53
LINC01287-201ENST00000416982 LTBP4Q8N2S1 1624 aa11.72□□□□□ -0.53
LINC01287-201ENST00000416982 TCIRG1Q13488 830 aa11.72□□□□□ -0.53
LINC01287-201ENST00000416982 NAA16Q6N069 864 aaPredicted RBP11.72□□□□□ -0.53
LINC01287-201ENST00000416982 ERC1Q8IUD2 1116 aa11.72□□□□□ -0.53
LINC01287-201ENST00000416982 SMARCC2Q8TAQ2 1214 aa11.72□□□□□ -0.53
LINC01287-201ENST00000416982 FBXW7Q969H0 707 aa11.72□□□□□ -0.53
LINC01287-201ENST00000416982 KIFC2Q96AC6 838 aa11.72□□□□□ -0.53
LINC01287-201ENST00000416982 TXLNAP40222 546 aa11.71□□□□□ -0.53
LINC01287-201ENST00000416982 RABL6Q3YEC7 729 aaPredicted RBP11.71□□□□□ -0.53
LINC01287-201ENST00000416982 ATL3Q6DD88 541 aa11.71□□□□□ -0.53
LINC01287-201ENST00000416982 TMEM139Q8IV31 216 aa11.71□□□□□ -0.53
LINC01287-201ENST00000416982 PPM1EQ8WY54 764 aa11.71□□□□□ -0.53
LINC01287-201ENST00000416982 GOLGA1Q92805 767 aa11.71□□□□□ -0.53
LINC01287-201ENST00000416982 DRC1Q96MC2 740 aa11.71□□□□□ -0.53
LINC01287-201ENST00000416982 WDR24Q96S15 920 aa11.71□□□□□ -0.53
LINC01287-201ENST00000416982 COPRSQ9NQ92 184 aa11.71□□□□□ -0.53
LINC01287-201ENST00000416982 ZSCAN12O43309 604 aa11.71□□□□□ -0.54
LINC01287-201ENST00000416982 ATP6V1AP38606 617 aa11.71□□□□□ -0.54
LINC01287-201ENST00000416982 FANCCQ00597 558 aa11.71□□□□□ -0.54
LINC01287-201ENST00000416982 HNRNPLLQ8WVV9 542 aaKnown RBP11.71□□□□□ -0.54
LINC01287-201ENST00000416982 HSD3B7Q9H2F3 369 aa11.71□□□□□ -0.54
LINC01287-201ENST00000416982 PDE11AQ9HCR9 933 aa11.71□□□□□ -0.54
LINC01287-201ENST00000416982 VPS18Q9P253 973 aa11.71□□□□□ -0.54
LINC01287-201ENST00000416982 KIAA1468Q9P260 1216 aa11.71□□□□□ -0.54
LINC01287-201ENST00000416982 MKRN1Q9UHC7 482 aaKnown RBP11.71□□□□□ -0.54
LINC01287-201ENST00000416982 BCL9O00512 1426 aa11.7□□□□□ -0.54
LINC01287-201ENST00000416982 HIP1O00291 1037 aa11.7□□□□□ -0.54
LINC01287-201ENST00000416982 GNL2Q13823 731 aaKnown RBP11.7□□□□□ -0.54
LINC01287-201ENST00000416982 KIF6Q6ZMV9 814 aa11.7□□□□□ -0.54
LINC01287-201ENST00000416982 TOMM22Q9NS69 142 aa11.7□□□□□ -0.54
LINC01287-201ENST00000416982 HMG20BQ9P0W2 317 aa11.7□□□□□ -0.54
LINC01287-201ENST00000416982 PPP2R2CQ9Y2T4 447 aa11.7□□□□□ -0.54
LINC01287-201ENST00000416982 DISP2A7MBM2 1401 aa11.7□□□□□ -0.54
LINC01287-201ENST00000416982 A0A0D9SFI3 127 aa11.7□□□□□ -0.54
LINC01287-201ENST00000416982 TNNI3KQ59H18 835 aa11.7□□□□□ -0.54
LINC01287-201ENST00000416982 BEND6Q5SZJ8 279 aaPredicted RBP11.7□□□□□ -0.54
LINC01287-201ENST00000416982 SWT1Q5T5J6 900 aaKnown RBP11.7□□□□□ -0.54
LINC01287-201ENST00000416982 MRPS27Q92552 414 aaKnown RBP11.7□□□□□ -0.54
LINC01287-201ENST00000416982 UTP14AQ9BVJ6 771 aaKnown RBP11.7□□□□□ -0.54
LINC01287-201ENST00000416982 FPGT-TNNI3KV9GXZ4 949 aa11.7□□□□□ -0.54
LINC01287-201ENST00000416982 GLI3P10071 1580 aa11.69□□□□□ -0.54
LINC01287-201ENST00000416982 USP5P45974 858 aa11.69□□□□□ -0.54
LINC01287-201ENST00000416982 NLRP12P59046 1061 aa11.69□□□□□ -0.54
LINC01287-201ENST00000416982 ATG9AQ7Z3C6 839 aa11.69□□□□□ -0.54
LINC01287-201ENST00000416982 TNS2Q63HR2 1409 aa11.69□□□□□ -0.54
LINC01287-201ENST00000416982 SPATA31A5Q5VU36 1347 aa11.69□□□□□ -0.54
LINC01287-201ENST00000416982 SPATA31A7Q8IWB4 1347 aa11.69□□□□□ -0.54
LINC01287-201ENST00000416982 PARP4Q9UKK3 1724 aaKnown RBP11.69□□□□□ -0.54
LINC01287-201ENST00000416982 A0A1W2PQ27 194 aa11.69□□□□□ -0.54
LINC01287-201ENST00000416982 A0A1W2PQ64 194 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms