RNA–Protein interactions for RNA: ENST00000409796.5

LYSMD4-204, Transcript of LysM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD4, Length 2,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-204ENST00000409796 METAP2P50579 478 aaKnown RBP eCLIP17.56■□□□□ 0.4
LYSMD4-204ENST00000409796 LDHAL6AQ6ZMR3 332 aa17.56■□□□□ 0.4
LYSMD4-204ENST00000409796 GREM2Q9H772 168 aa17.56■□□□□ 0.4
LYSMD4-204ENST00000409796 SENP2Q9HC62 589 aa17.56■□□□□ 0.4
LYSMD4-204ENST00000409796 PIH1D3Q9NQM4 214 aaKnown RBP17.56■□□□□ 0.4
LYSMD4-204ENST00000409796 SH2B2O14492 632 aaPredicted RBP17.55■□□□□ 0.4
LYSMD4-204ENST00000409796 ITGA6P23229 1130 aa17.55■□□□□ 0.4
LYSMD4-204ENST00000409796 GPTP24298 496 aa17.55■□□□□ 0.4
LYSMD4-204ENST00000409796 CDC27P30260 824 aa17.55■□□□□ 0.4
LYSMD4-204ENST00000409796 E4F1Q66K89 784 aaPredicted RBP17.55■□□□□ 0.4
LYSMD4-204ENST00000409796 KRT40Q6A162 431 aa17.55■□□□□ 0.4
LYSMD4-204ENST00000409796 VPS37DQ86XT2 251 aa17.55■□□□□ 0.4
LYSMD4-204ENST00000409796 CCDC150Q8NCX0 1101 aa17.55■□□□□ 0.4
LYSMD4-204ENST00000409796 TMOD3Q9NYL9 352 aa17.55■□□□□ 0.4
LYSMD4-204ENST00000409796 TPM4P67936 248 aa17.55■□□□□ 0.4
LYSMD4-204ENST00000409796 TTLL11Q8NHH1 800 aa17.55■□□□□ 0.4
LYSMD4-204ENST00000409796 KIF18AQ8NI77 898 aa17.55■□□□□ 0.4
LYSMD4-204ENST00000409796 PHKBQ93100 1093 aa17.55■□□□□ 0.4
LYSMD4-204ENST00000409796 CARD10Q9BWT7 1032 aa17.55■□□□□ 0.4
LYSMD4-204ENST00000409796 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.55■□□□□ 0.4
LYSMD4-204ENST00000409796 V9GYY5 206 aaPredicted RBP17.55■□□□□ 0.4
LYSMD4-204ENST00000409796 B4E1Z4 1266 aa17.54■□□□□ 0.4
LYSMD4-204ENST00000409796 IDH1O75874 414 aaKnown RBP17.54■□□□□ 0.4
LYSMD4-204ENST00000409796 APPP05067 770 aa17.54■□□□□ 0.4
LYSMD4-204ENST00000409796 LMOD1P29536 600 aaPredicted RBP17.54■□□□□ 0.4
LYSMD4-204ENST00000409796 SYKP43405 635 aa17.54■□□□□ 0.4
LYSMD4-204ENST00000409796 HLFQ16534 295 aa17.54■□□□□ 0.4
LYSMD4-204ENST00000409796 CNNM1Q9NRU3 951 aa17.54■□□□□ 0.4
LYSMD4-204ENST00000409796 ASAP1Q9ULH1 1129 aa17.54■□□□□ 0.4
LYSMD4-204ENST00000409796 ATRNO75882 1429 aa17.54■□□□□ 0.4
LYSMD4-204ENST00000409796 PTPAQ15257 358 aa17.54■□□□□ 0.4
LYSMD4-204ENST00000409796 APOA5Q6Q788 366 aa17.54■□□□□ 0.4
LYSMD4-204ENST00000409796 SHC4Q6S5L8 630 aa17.54■□□□□ 0.4
LYSMD4-204ENST00000409796 TIGD1Q96MW7 591 aa17.54■□□□□ 0.4
LYSMD4-204ENST00000409796 STRN4Q9NRL3 753 aa17.54■□□□□ 0.4
LYSMD4-204ENST00000409796 OGFRQ9NZT2 677 aa17.54■□□□□ 0.4
LYSMD4-204ENST00000409796 MYH3P11055 1940 aa17.53■□□□□ 0.4
LYSMD4-204ENST00000409796 FANCCQ00597 558 aa17.53■□□□□ 0.4
LYSMD4-204ENST00000409796 GIGYF2Q6Y7W6 1299 aaKnown RBP17.53■□□□□ 0.4
LYSMD4-204ENST00000409796 BRINP3Q76B58 766 aa17.53■□□□□ 0.4
LYSMD4-204ENST00000409796 MICU3Q86XE3 530 aa17.53■□□□□ 0.4
LYSMD4-204ENST00000409796 RGS22Q8NE09 1264 aa17.53■□□□□ 0.4
LYSMD4-204ENST00000409796 HSD3B7Q9H2F3 369 aa17.53■□□□□ 0.4
LYSMD4-204ENST00000409796 HPSEQ9Y251 543 aa17.53■□□□□ 0.4
LYSMD4-204ENST00000409796 MAP3K15Q6ZN16 1313 aa17.53■□□□□ 0.4
LYSMD4-204ENST00000409796 CDHR2Q9BYE9 1310 aa17.53■□□□□ 0.4
LYSMD4-204ENST00000409796 ZNF532Q9HCE3 1301 aa17.53■□□□□ 0.4
LYSMD4-204ENST00000409796 CDKL5O76039 1030 aa17.53■□□□□ 0.4
LYSMD4-204ENST00000409796 ATP1A3P13637 1013 aa17.53■□□□□ 0.4
LYSMD4-204ENST00000409796 SFPQP23246 707 aaKnown RBP eCLIP17.53■□□□□ 0.4
LYSMD4-204ENST00000409796 VGLL2Q8N8G2 317 aa17.53■□□□□ 0.4
LYSMD4-204ENST00000409796 PPP1R13BQ96KQ4 1090 aa17.53■□□□□ 0.4
LYSMD4-204ENST00000409796 TMEM51Q9NW97 253 aa17.53■□□□□ 0.4
LYSMD4-204ENST00000409796 TUBE1Q9UJT0 475 aa17.53■□□□□ 0.4
LYSMD4-204ENST00000409796 IKBKBO14920 756 aa17.52■□□□□ 0.4
LYSMD4-204ENST00000409796 PPP6R2O75170 966 aa17.52■□□□□ 0.4
LYSMD4-204ENST00000409796 PIP4K2BP78356 416 aa17.52■□□□□ 0.4
LYSMD4-204ENST00000409796 TTF1Q15361 905 aaPredicted RBP17.52■□□□□ 0.4
LYSMD4-204ENST00000409796 NLRP10Q86W26 655 aa17.52■□□□□ 0.4
LYSMD4-204ENST00000409796 ZNF512BQ96KM6 892 aaPredicted RBP17.52■□□□□ 0.4
LYSMD4-204ENST00000409796 ANKRD18BA2A2Z9 1011 aa17.52■□□□□ 0.39
LYSMD4-204ENST00000409796 KIF2AO00139 706 aaPredicted RBP17.52■□□□□ 0.39
LYSMD4-204ENST00000409796 HSPA1LP34931 641 aa17.52■□□□□ 0.39
LYSMD4-204ENST00000409796 PHKA1P46020 1223 aa17.52■□□□□ 0.39
LYSMD4-204ENST00000409796 GNL2Q13823 731 aaKnown RBP17.52■□□□□ 0.39
LYSMD4-204ENST00000409796 UBE3CQ15386 1083 aa17.52■□□□□ 0.39
LYSMD4-204ENST00000409796 ERO1AQ96HE7 468 aa17.52■□□□□ 0.39
LYSMD4-204ENST00000409796 CLIC6Q96NY7 704 aa17.52■□□□□ 0.39
LYSMD4-204ENST00000409796 MAP3K14Q99558 947 aa17.52■□□□□ 0.39
LYSMD4-204ENST00000409796 INCENPQ9NQS7 918 aa17.52■□□□□ 0.39
LYSMD4-204ENST00000409796 WWC3Q9ULE0 1092 aa17.52■□□□□ 0.39
LYSMD4-204ENST00000409796 PDE6AP16499 860 aa17.51■□□□□ 0.39
LYSMD4-204ENST00000409796 CTSWP56202 376 aa17.51■□□□□ 0.39
LYSMD4-204ENST00000409796 PNOCQ13519 176 aa17.51■□□□□ 0.39
LYSMD4-204ENST00000409796 CPLX2Q6PUV4 134 aaKnown RBP17.51■□□□□ 0.39
LYSMD4-204ENST00000409796 IGDCC4Q8TDY8 1250 aa17.51■□□□□ 0.39
LYSMD4-204ENST00000409796 SYTL4Q96C24 671 aaPredicted RBP17.51■□□□□ 0.39
LYSMD4-204ENST00000409796 MYL10Q9BUA6 226 aa17.51■□□□□ 0.39
LYSMD4-204ENST00000409796 ZBTB43O43298 467 aa17.51■□□□□ 0.39
LYSMD4-204ENST00000409796 RANBP6O60518 1105 aaKnown RBP17.51■□□□□ 0.39
LYSMD4-204ENST00000409796 NTRK3Q16288 839 aa17.51■□□□□ 0.39
LYSMD4-204ENST00000409796 PIGBQ92521 554 aa17.51■□□□□ 0.39
LYSMD4-204ENST00000409796 TEX13AQ9BXU3 409 aaPredicted RBP17.51■□□□□ 0.39
LYSMD4-204ENST00000409796 DDX41Q9UJV9 622 aaKnown RBP17.51■□□□□ 0.39
LYSMD4-204ENST00000409796 CHD4Q14839 1912 aa17.51■□□□□ 0.39
LYSMD4-204ENST00000409796 PSDA5PKW4 1024 aaPredicted RBP17.5■□□□□ 0.39
LYSMD4-204ENST00000409796 UBE2Q2LH0YL09 131 aa17.5■□□□□ 0.39
LYSMD4-204ENST00000409796 SLU7O95391 586 aaKnown RBP17.5■□□□□ 0.39
LYSMD4-204ENST00000409796 CCDC102BQ68D86 513 aa17.5■□□□□ 0.39
LYSMD4-204ENST00000409796 NFXL1Q6ZNB6 911 aa17.5■□□□□ 0.39
LYSMD4-204ENST00000409796 JMYQ8N9B5 988 aa17.5■□□□□ 0.39
LYSMD4-204ENST00000409796 DPF2Q92785 391 aa17.5■□□□□ 0.39
LYSMD4-204ENST00000409796 TMEM87BQ96K49 555 aa17.5■□□□□ 0.39
LYSMD4-204ENST00000409796 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.5■□□□□ 0.39
LYSMD4-204ENST00000409796 LY9Q9HBG7 655 aa17.5■□□□□ 0.39
LYSMD4-204ENST00000409796 FAM217BQ9NTX9 383 aaPredicted RBP17.5■□□□□ 0.39
LYSMD4-204ENST00000409796 TCRBV5S4A2TA0A5A2 114 aa17.5■□□□□ 0.39
LYSMD4-204ENST00000409796 GOLGA8AA7E2F4 631 aa17.5■□□□□ 0.39
LYSMD4-204ENST00000409796 IARSP41252 1262 aaKnown RBP17.5■□□□□ 0.39
LYSMD4-204ENST00000409796 ELF2Q15723 593 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms