RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.46□□□□□ -0.9
SCN9A-203ENST00000409672 RBM8AQ9Y5S9 174 aaKnown RBP9.46□□□□□ -0.9
SCN9A-203ENST00000409672 MRC2Q9UBG0 1479 aa9.46□□□□□ -0.9
SCN9A-203ENST00000409672 ZBED4O75132 1171 aa9.46□□□□□ -0.9
SCN9A-203ENST00000409672 MBD4O95243 580 aa9.46□□□□□ -0.9
SCN9A-203ENST00000409672 SAT1P21673 171 aa9.46□□□□□ -0.9
SCN9A-203ENST00000409672 ARHGEF16Q5VV41 709 aa9.46□□□□□ -0.9
SCN9A-203ENST00000409672 ST7Q9NRC1 585 aa9.46□□□□□ -0.9
SCN9A-203ENST00000409672 CTNND2Q9UQB3 1225 aa9.46□□□□□ -0.9
SCN9A-203ENST00000409672 PIK3R4Q99570 1358 aa9.45□□□□□ -0.9
SCN9A-203ENST00000409672 TRIM27P14373 513 aa9.45□□□□□ -0.9
SCN9A-203ENST00000409672 SLFN5Q08AF3 891 aa9.45□□□□□ -0.9
SCN9A-203ENST00000409672 MCM6Q14566 821 aa9.45□□□□□ -0.9
SCN9A-203ENST00000409672 ANO6Q4KMQ2 910 aa9.45□□□□□ -0.9
SCN9A-203ENST00000409672 GTPBP4Q9BZE4 634 aaKnown RBP9.45□□□□□ -0.9
SCN9A-203ENST00000409672 FAM204AQ9H8W3 233 aa9.45□□□□□ -0.9
SCN9A-203ENST00000409672 RASAL2Q9UJF2 1139 aa9.45□□□□□ -0.9
SCN9A-203ENST00000409672 MAPKAPK5Q8IW41 473 aa9.45□□□□□ -0.9
SCN9A-203ENST00000409672 TIMM10P62072 90 aa9.45□□□□□ -0.9
SCN9A-203ENST00000409672 NMIQ13287 307 aaPredicted RBP9.45□□□□□ -0.9
SCN9A-203ENST00000409672 CCDC89Q8N998 374 aa9.45□□□□□ -0.9
SCN9A-203ENST00000409672 NOS1P29475 1434 aa9.45□□□□□ -0.9
SCN9A-203ENST00000409672 B4E1Z4 1266 aa9.45□□□□□ -0.9
SCN9A-203ENST00000409672 KRT24Q2M2I5 525 aa9.45□□□□□ -0.9
SCN9A-203ENST00000409672 AOPEPQ8N6M6 819 aa9.45□□□□□ -0.9
SCN9A-203ENST00000409672 UBLCP1Q8WVY7 318 aaPredicted RBP9.45□□□□□ -0.9
SCN9A-203ENST00000409672 CNNM2Q9H8M5 875 aa9.45□□□□□ -0.9
SCN9A-203ENST00000409672 MLXIPQ9HAP2 919 aa9.45□□□□□ -0.9
SCN9A-203ENST00000409672 ANKFY1Q9P2R3 1169 aa9.45□□□□□ -0.9
SCN9A-203ENST00000409672 GUCA1BQ9UMX6 200 aa9.45□□□□□ -0.9
SCN9A-203ENST00000409672 ABCC5O15440 1437 aa9.45□□□□□ -0.9
SCN9A-203ENST00000409672 RARSP54136 660 aaKnown RBP9.45□□□□□ -0.9
SCN9A-203ENST00000409672 GTF2IP78347 998 aa9.45□□□□□ -0.9
SCN9A-203ENST00000409672 MSANTD4Q8NCY6 345 aa9.45□□□□□ -0.9
SCN9A-203ENST00000409672 GANCQ8TET4 914 aa9.45□□□□□ -0.9
SCN9A-203ENST00000409672 ZNF653Q96CK0 615 aa9.45□□□□□ -0.9
SCN9A-203ENST00000409672 TAB3Q8N5C8 712 aaPredicted RBP9.45□□□□□ -0.9
SCN9A-203ENST00000409672 SEC62Q99442 399 aaKnown RBP9.45□□□□□ -0.9
SCN9A-203ENST00000409672 MCM4P33991 863 aa9.45□□□□□ -0.9
SCN9A-203ENST00000409672 DLGAP5Q15398 846 aa9.45□□□□□ -0.9
SCN9A-203ENST00000409672 PTPROQ16827 1216 aa9.45□□□□□ -0.9
SCN9A-203ENST00000409672 TMTC4Q5T4D3 741 aa9.45□□□□□ -0.9
SCN9A-203ENST00000409672 SPECC1LQ69YQ0 1117 aa9.45□□□□□ -0.9
SCN9A-203ENST00000409672 KANK3Q6NY19 840 aa9.45□□□□□ -0.9
SCN9A-203ENST00000409672 FMNL3Q8IVF7 1028 aa9.45□□□□□ -0.9
SCN9A-203ENST00000409672 LRRC43Q8N309 656 aa9.45□□□□□ -0.9
SCN9A-203ENST00000409672 TRIM7Q9C029 511 aa9.45□□□□□ -0.9
SCN9A-203ENST00000409672 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.45□□□□□ -0.9
SCN9A-203ENST00000409672 V9GYY5 206 aaPredicted RBP9.45□□□□□ -0.9
SCN9A-203ENST00000409672 GCNT3O95395 438 aa9.44□□□□□ -0.9
SCN9A-203ENST00000409672 LZTFL1Q9NQ48 299 aa9.44□□□□□ -0.9
SCN9A-203ENST00000409672 BNIP3LO60238 219 aa9.44□□□□□ -0.9
SCN9A-203ENST00000409672 MCM3P25205 808 aa9.44□□□□□ -0.9
SCN9A-203ENST00000409672 HIBADHP31937 336 aaKnown RBP9.44□□□□□ -0.9
SCN9A-203ENST00000409672 SMTNP53814 917 aa9.44□□□□□ -0.9
SCN9A-203ENST00000409672 CLRN2A0PK11 232 aa9.44□□□□□ -0.9
SCN9A-203ENST00000409672 GIPC1O14908 333 aa9.44□□□□□ -0.9
SCN9A-203ENST00000409672 ITGA6P23229 1130 aa9.44□□□□□ -0.9
SCN9A-203ENST00000409672 CTDSPL2Q05D32 466 aa9.44□□□□□ -0.9
SCN9A-203ENST00000409672 SCYL2Q6P3W7 929 aa9.44□□□□□ -0.9
SCN9A-203ENST00000409672 MYO1AQ9UBC5 1043 aa9.44□□□□□ -0.9
SCN9A-203ENST00000409672 DYMQ7RTS9 669 aa9.44□□□□□ -0.9
SCN9A-203ENST00000409672 SULF1Q8IWU6 871 aa9.44□□□□□ -0.9
SCN9A-203ENST00000409672 NSMCE1Q8WV22 266 aa9.44□□□□□ -0.9
SCN9A-203ENST00000409672 NOC2LQ9Y3T9 749 aaKnown RBP9.44□□□□□ -0.9
SCN9A-203ENST00000409672 PTPRCP08575 1304 aa9.44□□□□□ -0.9
SCN9A-203ENST00000409672 PSMA7O14818 248 aa9.44□□□□□ -0.9
SCN9A-203ENST00000409672 KIAA0825Q8IV33 1275 aa9.44□□□□□ -0.9
SCN9A-203ENST00000409672 VPS52Q8N1B4 723 aa9.44□□□□□ -0.9
SCN9A-203ENST00000409672 KLHDC4Q8TBB5 520 aa9.44□□□□□ -0.9
SCN9A-203ENST00000409672 CACYBPQ9HB71 228 aaKnown RBP9.44□□□□□ -0.9
SCN9A-203ENST00000409672 KIF14Q15058 1648 aa9.44□□□□□ -0.9
SCN9A-203ENST00000409672 CARD10Q9BWT7 1032 aa9.44□□□□□ -0.9
SCN9A-203ENST00000409672 ARHGEF35A5YM69 484 aa9.44□□□□□ -0.9
SCN9A-203ENST00000409672 TRAF5O00463 557 aa9.44□□□□□ -0.9
SCN9A-203ENST00000409672 EPB41P11171 864 aaKnown RBP9.44□□□□□ -0.9
SCN9A-203ENST00000409672 MYCT1Q8N699 235 aa9.44□□□□□ -0.9
SCN9A-203ENST00000409672 ATRIPQ8WXE1 791 aa9.44□□□□□ -0.9
SCN9A-203ENST00000409672 PLCG2P16885 1265 aa9.43□□□□□ -0.9
SCN9A-203ENST00000409672 ZEB2O60315 1214 aa9.43□□□□□ -0.9
SCN9A-203ENST00000409672 CD19P15391 556 aa9.43□□□□□ -0.9
SCN9A-203ENST00000409672 ZNF165P49910 485 aa9.43□□□□□ -0.9
SCN9A-203ENST00000409672 FAM102BQ5T8I3 360 aa9.43□□□□□ -0.9
SCN9A-203ENST00000409672 RPUSD2Q8IZ73 545 aaKnown RBP9.43□□□□□ -0.9
SCN9A-203ENST00000409672 BANK1Q8NDB2 785 aa9.43□□□□□ -0.9
SCN9A-203ENST00000409672 SUGCTQ9HAC7 445 aa9.43□□□□□ -0.9
SCN9A-203ENST00000409672 CD2APQ9Y5K6 639 aa9.43□□□□□ -0.9
SCN9A-203ENST00000409672 INF2Q27J81 1249 aa9.43□□□□□ -0.9
SCN9A-203ENST00000409672 PIK3AP1Q6ZUJ8 805 aa9.43□□□□□ -0.9
SCN9A-203ENST00000409672 DAAM2Q86T65 1068 aa9.43□□□□□ -0.9
SCN9A-203ENST00000409672 DPP9Q86TI2 863 aa9.43□□□□□ -0.9
SCN9A-203ENST00000409672 GOLGA6L9A6NEM1 432 aa9.43□□□□□ -0.9
SCN9A-203ENST00000409672 GNAQP50148 359 aa9.43□□□□□ -0.9
SCN9A-203ENST00000409672 DNM2P50570 870 aa9.43□□□□□ -0.9
SCN9A-203ENST00000409672 FAM47AQ5JRC9 791 aa9.43□□□□□ -0.9
SCN9A-203ENST00000409672 TPH2Q8IWU9 490 aa9.43□□□□□ -0.9
SCN9A-203ENST00000409672 RHPN1Q8TCX5 695 aa9.43□□□□□ -0.9
SCN9A-203ENST00000409672 ANKRD2Q9GZV1 360 aa9.43□□□□□ -0.9
SCN9A-203ENST00000409672 SPOPO43791 374 aa9.43□□□□□ -0.9
SCN9A-203ENST00000409672 YARSP54577 528 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms