RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 AK5Q9Y6K8 562 aa7.28□□□□□ -1.24
PMS1-203ENST00000409593 ENC1O14682 589 aa7.28□□□□□ -1.24
PMS1-203ENST00000409593 AOC2O75106 756 aa7.28□□□□□ -1.24
PMS1-203ENST00000409593 CELA3AP09093 270 aa7.28□□□□□ -1.24
PMS1-203ENST00000409593 NME2P22392 152 aa7.28□□□□□ -1.24
PMS1-203ENST00000409593 USP11P51784 963 aa7.28□□□□□ -1.24
PMS1-203ENST00000409593 HNRNPUQ00839 825 aaKnown RBP eCLIP7.28□□□□□ -1.24
PMS1-203ENST00000409593 STK35Q8TDR2 534 aa7.28□□□□□ -1.24
PMS1-203ENST00000409593 WDR18Q9BV38 432 aa7.28□□□□□ -1.24
PMS1-203ENST00000409593 BCL2L13Q9BXK5 485 aa7.28□□□□□ -1.24
PMS1-203ENST00000409593 MRS2Q9HD23 443 aa7.28□□□□□ -1.24
PMS1-203ENST00000409593 HIF3AQ9Y2N7 669 aa7.28□□□□□ -1.24
PMS1-203ENST00000409593 PAGE1O75459 146 aa7.27□□□□□ -1.25
PMS1-203ENST00000409593 MAP1SQ66K74 1059 aaPredicted RBP7.27□□□□□ -1.25
PMS1-203ENST00000409593 BEND4Q6ZU67 534 aa7.27□□□□□ -1.25
PMS1-203ENST00000409593 DYMQ7RTS9 669 aa7.27□□□□□ -1.25
PMS1-203ENST00000409593 C2CD4AQ8NCU7 369 aaPredicted RBP7.27□□□□□ -1.25
PMS1-203ENST00000409593 WDR89Q96FK6 387 aaPredicted RBP7.27□□□□□ -1.25
PMS1-203ENST00000409593 EMILIN2Q9BXX0 1053 aa7.27□□□□□ -1.25
PMS1-203ENST00000409593 C7orf69Q9H7B7 122 aa7.27□□□□□ -1.25
PMS1-203ENST00000409593 SAMM50Q9Y512 469 aa7.27□□□□□ -1.25
PMS1-203ENST00000409593 HMX2A2RU54 273 aa7.26□□□□□ -1.25
PMS1-203ENST00000409593 FSTP19883 344 aa7.26□□□□□ -1.25
PMS1-203ENST00000409593 RAB6AP20340 208 aa7.26□□□□□ -1.25
PMS1-203ENST00000409593 ARNTP27540 789 aa7.26□□□□□ -1.25
PMS1-203ENST00000409593 MAP4P27816 1152 aaKnown RBP7.26□□□□□ -1.25
PMS1-203ENST00000409593 MFAP1P55081 439 aaKnown RBP7.26□□□□□ -1.25
PMS1-203ENST00000409593 DAB2P98082 770 aa7.26□□□□□ -1.25
PMS1-203ENST00000409593 TRIM26Q12899 539 aaPredicted RBP7.26□□□□□ -1.25
PMS1-203ENST00000409593 PDZD3Q86UT5 571 aa7.26□□□□□ -1.25
PMS1-203ENST00000409593 TRIM42Q8IWZ5 723 aa7.26□□□□□ -1.25
PMS1-203ENST00000409593 Q8N3U1 123 aa7.26□□□□□ -1.25
PMS1-203ENST00000409593 ACSBG1Q96GR2 724 aa7.26□□□□□ -1.25
PMS1-203ENST00000409593 ACTL7BQ9Y614 415 aa7.26□□□□□ -1.25
PMS1-203ENST00000409593 GIPC2Q8TF65 315 aa7.25□□□□□ -1.25
PMS1-203ENST00000409593 FBLIM1Q8WUP2 373 aa7.25□□□□□ -1.25
PMS1-203ENST00000409593 YIPF2Q9BWQ6 316 aa7.25□□□□□ -1.25
PMS1-203ENST00000409593 KRT82Q9NSB4 513 aa7.25□□□□□ -1.25
PMS1-203ENST00000409593 ZNF862O60290 1169 aa7.25□□□□□ -1.25
PMS1-203ENST00000409593 CCDC85BQ15834 202 aaPredicted RBP7.25□□□□□ -1.25
PMS1-203ENST00000409593 MEI1Q5TIA1 1274 aa7.25□□□□□ -1.25
PMS1-203ENST00000409593 PCNX4Q63HM2 1172 aa7.25□□□□□ -1.25
PMS1-203ENST00000409593 CDPF1Q6NVV7 123 aa7.25□□□□□ -1.25
PMS1-203ENST00000409593 TMC4Q7Z404 712 aa7.25□□□□□ -1.25
PMS1-203ENST00000409593 CLEC10AQ8IUN9 316 aa7.25□□□□□ -1.25
PMS1-203ENST00000409593 VTI1BQ9UEU0 232 aa7.25□□□□□ -1.25
PMS1-203ENST00000409593 SORBS3O60504 671 aa7.24□□□□□ -1.25
PMS1-203ENST00000409593 SLFN14P0C7P3 912 aa7.24□□□□□ -1.25
PMS1-203ENST00000409593 GRIN3AQ8TCU5 1115 aa7.24□□□□□ -1.25
PMS1-203ENST00000409593 ANKRD24Q8TF21 1146 aa7.24□□□□□ -1.25
PMS1-203ENST00000409593 FAM105AQ9NUU6 356 aa7.24□□□□□ -1.25
PMS1-203ENST00000409593 PPP1R9AQ9ULJ8 1098 aa7.24□□□□□ -1.25
PMS1-203ENST00000409593 TMPRSS2O15393 492 aa7.23□□□□□ -1.25
PMS1-203ENST00000409593 BMP6P22004 513 aa7.23□□□□□ -1.25
PMS1-203ENST00000409593 ASPAP45381 313 aa7.23□□□□□ -1.25
PMS1-203ENST00000409593 NFKBIBQ15653 356 aa7.23□□□□□ -1.25
PMS1-203ENST00000409593 KIF4BQ2VIQ3 1234 aa7.23□□□□□ -1.25
PMS1-203ENST00000409593 ZMYM1Q5SVZ6 1142 aa7.23□□□□□ -1.25
PMS1-203ENST00000409593 LLGL2Q6P1M3 1020 aa7.23□□□□□ -1.25
PMS1-203ENST00000409593 SV2BQ7L1I2 683 aa7.23□□□□□ -1.25
PMS1-203ENST00000409593 GPBAR1Q8TDU6 330 aa7.23□□□□□ -1.25
PMS1-203ENST00000409593 FAM83CQ9BQN1 747 aa7.23□□□□□ -1.25
PMS1-203ENST00000409593 FAM95CA0A1B0GW59 222 aa7.22□□□□□ -1.25
PMS1-203ENST00000409593 GSC2O15499 205 aa7.22□□□□□ -1.25
PMS1-203ENST00000409593 IGLV1-40P01703 118 aa7.22□□□□□ -1.25
PMS1-203ENST00000409593 ID3Q02535 119 aa7.22□□□□□ -1.25
PMS1-203ENST00000409593 ZNF252P-AS1Q0IIN9 211 aa7.22□□□□□ -1.25
PMS1-203ENST00000409593 NFIAQ12857 509 aa7.22□□□□□ -1.25
PMS1-203ENST00000409593 LRRC14Q15048 493 aa7.22□□□□□ -1.25
PMS1-203ENST00000409593 MAP3K11Q16584 847 aa7.22□□□□□ -1.25
PMS1-203ENST00000409593 ZNF326Q5BKZ1 582 aaKnown RBP7.22□□□□□ -1.25
PMS1-203ENST00000409593 MPRIPQ6WCQ1 1025 aa7.22□□□□□ -1.25
PMS1-203ENST00000409593 KRTAP4-12Q9BQ66 201 aa7.22□□□□□ -1.25
PMS1-203ENST00000409593 RNF43Q68DV7 783 aa7.22□□□□□ -1.25
PMS1-203ENST00000409593 TTBK2Q6IQ55 1244 aa7.22□□□□□ -1.25
PMS1-203ENST00000409593 PAOXQ6QHF9 649 aa7.22□□□□□ -1.25
PMS1-203ENST00000409593 PIDD1Q9HB75 910 aa7.22□□□□□ -1.25
PMS1-203ENST00000409593 DAGLAQ9Y4D2 1042 aa7.22□□□□□ -1.25
PMS1-203ENST00000409593 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.21□□□□□ -1.26
PMS1-203ENST00000409593 LMNB1P20700 586 aa7.21□□□□□ -1.26
PMS1-203ENST00000409593 ITGAEP38570 1179 aa7.21□□□□□ -1.26
PMS1-203ENST00000409593 RASIP1Q5U651 963 aa7.21□□□□□ -1.26
PMS1-203ENST00000409593 CRELD1Q96HD1 420 aa7.21□□□□□ -1.26
PMS1-203ENST00000409593 MFSD14AQ96MC6 490 aa7.21□□□□□ -1.26
PMS1-203ENST00000409593 FANCD2OSQ96PS1 177 aa7.21□□□□□ -1.26
PMS1-203ENST00000409593 DBNDD2Q9BQY9 259 aa7.21□□□□□ -1.26
PMS1-203ENST00000409593 ATXN3LQ9H3M9 355 aa7.21□□□□□ -1.26
PMS1-203ENST00000409593 CRIM1Q9NZV1 1036 aa7.21□□□□□ -1.26
PMS1-203ENST00000409593 SYNGAP1Q96PV0 1343 aa7.21□□□□□ -1.26
PMS1-203ENST00000409593 TRIM37O94972 964 aa7.2□□□□□ -1.26
PMS1-203ENST00000409593 NFICP08651 508 aa7.2□□□□□ -1.26
PMS1-203ENST00000409593 CTSHP09668 335 aa7.2□□□□□ -1.26
PMS1-203ENST00000409593 TAF1CQ15572 869 aaPredicted RBP7.2□□□□□ -1.26
PMS1-203ENST00000409593 FBXL6Q8N531 539 aa7.2□□□□□ -1.26
PMS1-203ENST00000409593 BCL11AQ9H165 835 aa7.2□□□□□ -1.26
PMS1-203ENST00000409593 LGR6Q9HBX8 967 aa7.2□□□□□ -1.26
PMS1-203ENST00000409593 CYP8B1Q9UNU6 501 aa7.2□□□□□ -1.26
PMS1-203ENST00000409593 PCDHGC5Q9Y5F6 944 aa7.2□□□□□ -1.26
PMS1-203ENST00000409593 SCO2A0A1W2PP80 73 aa7.19□□□□□ -1.26
PMS1-203ENST00000409593 MAP7Q14244 749 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms