RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 GSTO1P78417 241 aa16.66■□□□□ 0.26
GPNMB-203ENST00000409458 CC2D2BQ6DHV5 1058 aa16.66■□□□□ 0.26
GPNMB-203ENST00000409458 CHST3Q7LGC8 479 aa16.66■□□□□ 0.26
GPNMB-203ENST00000409458 FBXW7Q969H0 707 aa16.66■□□□□ 0.26
GPNMB-203ENST00000409458 SH2B1Q9NRF2 756 aaPredicted RBP16.66■□□□□ 0.26
GPNMB-203ENST00000409458 BRCA1P38398 1863 aaKnown RBP16.66■□□□□ 0.26
GPNMB-203ENST00000409458 SCN9AQ15858 1988 aa16.66■□□□□ 0.26
GPNMB-203ENST00000409458 MROH7-TTC4A0A0A0MT08 1334 aa16.66■□□□□ 0.26
GPNMB-203ENST00000409458 NEDD4P46934 1319 aa16.66■□□□□ 0.26
GPNMB-203ENST00000409458 CTDSPL2Q05D32 466 aa16.65■□□□□ 0.26
GPNMB-203ENST00000409458 NCOA7Q8NI08 942 aa16.65■□□□□ 0.26
GPNMB-203ENST00000409458 NKX2-3Q8TAU0 364 aa16.65■□□□□ 0.26
GPNMB-203ENST00000409458 DBNDD1Q9H9R9 158 aa16.65■□□□□ 0.26
GPNMB-203ENST00000409458 CWC22Q9HCG8 908 aaKnown RBP16.65■□□□□ 0.26
GPNMB-203ENST00000409458 TACC3Q9Y6A5 838 aa16.65■□□□□ 0.26
GPNMB-203ENST00000409458 CDK5RAP2Q96SN8 1893 aa16.65■□□□□ 0.26
GPNMB-203ENST00000409458 PSDA5PKW4 1024 aaPredicted RBP16.65■□□□□ 0.26
GPNMB-203ENST00000409458 RALYLQ86SE5 291 aaKnown RBP16.65■□□□□ 0.26
GPNMB-203ENST00000409458 CCDC83Q8IWF9 413 aa16.65■□□□□ 0.26
GPNMB-203ENST00000409458 CERS5Q8N5B7 392 aa16.65■□□□□ 0.26
GPNMB-203ENST00000409458 BRF1Q92994 677 aa16.65■□□□□ 0.26
GPNMB-203ENST00000409458 NAV1Q8NEY1 1877 aa16.65■□□□□ 0.26
GPNMB-203ENST00000409458 ADAMTSL1Q8N6G6 1762 aa16.64■□□□□ 0.25
GPNMB-203ENST00000409458 G3V3G9 751 aa16.64■□□□□ 0.25
GPNMB-203ENST00000409458 ANTXR2P58335 489 aa16.64■□□□□ 0.25
GPNMB-203ENST00000409458 RAB3GAP1Q15042 981 aa16.64■□□□□ 0.25
GPNMB-203ENST00000409458 AOC3Q16853 763 aa16.64■□□□□ 0.25
GPNMB-203ENST00000409458 DCAF8Q5TAQ9 597 aa16.64■□□□□ 0.25
GPNMB-203ENST00000409458 NECAB1Q8N987 351 aa16.64■□□□□ 0.25
GPNMB-203ENST00000409458 SGIP1Q9BQI5 828 aa16.64■□□□□ 0.25
GPNMB-203ENST00000409458 MXD3Q9BW11 206 aa16.64■□□□□ 0.25
GPNMB-203ENST00000409458 AGXT2Q9BYV1 514 aa16.64■□□□□ 0.25
GPNMB-203ENST00000409458 CRNKL1Q9BZJ0 848 aaKnown RBP16.64■□□□□ 0.25
GPNMB-203ENST00000409458 PRC1O43663 620 aa16.63■□□□□ 0.25
GPNMB-203ENST00000409458 ECE2O60344 883 aa16.63■□□□□ 0.25
GPNMB-203ENST00000409458 PPARAQ07869 468 aa16.63■□□□□ 0.25
GPNMB-203ENST00000409458 CCDC93Q567U6 631 aa16.63■□□□□ 0.25
GPNMB-203ENST00000409458 INCENPQ9NQS7 918 aa16.63■□□□□ 0.25
GPNMB-203ENST00000409458 LDHCP07864 332 aa16.62■□□□□ 0.25
GPNMB-203ENST00000409458 MCM5P33992 734 aa16.62■□□□□ 0.25
GPNMB-203ENST00000409458 BTDP43251 543 aa16.62■□□□□ 0.25
GPNMB-203ENST00000409458 TGFB2P61812 414 aa16.62■□□□□ 0.25
GPNMB-203ENST00000409458 FGD1P98174 961 aa16.62■□□□□ 0.25
GPNMB-203ENST00000409458 KIAA2012Q0VF49 1180 aa16.62■□□□□ 0.25
GPNMB-203ENST00000409458 TRDNQ13061 729 aa16.62■□□□□ 0.25
GPNMB-203ENST00000409458 PKP1Q13835 747 aa16.62■□□□□ 0.25
GPNMB-203ENST00000409458 NBR1Q14596 966 aa16.62■□□□□ 0.25
GPNMB-203ENST00000409458 NFKBIBQ15653 356 aa16.62■□□□□ 0.25
GPNMB-203ENST00000409458 AKNAD1Q5T1N1 836 aa16.62■□□□□ 0.25
GPNMB-203ENST00000409458 GIMAP6Q6P9H5 292 aa16.62■□□□□ 0.25
GPNMB-203ENST00000409458 PODNQ7Z5L7 613 aa16.62■□□□□ 0.25
GPNMB-203ENST00000409458 SH3RF3Q8TEJ3 882 aaPredicted RBP16.62■□□□□ 0.25
GPNMB-203ENST00000409458 STAG1Q8WVM7 1258 aa16.62■□□□□ 0.25
GPNMB-203ENST00000409458 DCP1AQ9NPI6 582 aaPredicted RBP16.62■□□□□ 0.25
GPNMB-203ENST00000409458 KCNQ5Q9NR82 932 aa16.62■□□□□ 0.25
GPNMB-203ENST00000409458 DDX60LQ5H9U9 1706 aaKnown RBP16.62■□□□□ 0.25
GPNMB-203ENST00000409458 GAKO14976 1311 aa16.62■□□□□ 0.25
GPNMB-203ENST00000409458 WDR19Q8NEZ3 1342 aa16.62■□□□□ 0.25
GPNMB-203ENST00000409458 B4E1Z4 1266 aa16.62■□□□□ 0.25
GPNMB-203ENST00000409458 SMIM22K7EJ46 135 aa16.62■□□□□ 0.25
GPNMB-203ENST00000409458 PPP4CP60510 307 aa16.62■□□□□ 0.25
GPNMB-203ENST00000409458 STK3Q13188 491 aa16.62■□□□□ 0.25
GPNMB-203ENST00000409458 CYB5R4Q7L1T6 521 aa16.62■□□□□ 0.25
GPNMB-203ENST00000409458 SUPT20HQ8NEM7 779 aa16.62■□□□□ 0.25
GPNMB-203ENST00000409458 GPHNQ9NQX3 736 aaPredicted RBP16.62■□□□□ 0.25
GPNMB-203ENST00000409458 ANAPC4Q9UJX5 808 aa16.62■□□□□ 0.25
GPNMB-203ENST00000409458 SUGT1Q9Y2Z0 365 aa16.62■□□□□ 0.25
GPNMB-203ENST00000409458 CYP2D7A0A087X1C5 515 aa16.61■□□□□ 0.25
GPNMB-203ENST00000409458 MINDY4BA8MYZ0 360 aa16.61■□□□□ 0.25
GPNMB-203ENST00000409458 BAG3O95817 575 aa16.61■□□□□ 0.25
GPNMB-203ENST00000409458 APOBRQ0VD83 1088 aa16.61■□□□□ 0.25
GPNMB-203ENST00000409458 CTR9Q6PD62 1173 aa16.61■□□□□ 0.25
GPNMB-203ENST00000409458 FBXL16Q8N461 479 aa16.61■□□□□ 0.25
GPNMB-203ENST00000409458 FAM163AQ96GL9 167 aaPredicted RBP16.61■□□□□ 0.25
GPNMB-203ENST00000409458 NOL10Q9BSC4 688 aaKnown RBP16.61■□□□□ 0.25
GPNMB-203ENST00000409458 ATP8A2Q9NTI2 1148 aa16.61■□□□□ 0.25
GPNMB-203ENST00000409458 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.61■□□□□ 0.25
GPNMB-203ENST00000409458 PSME4Q14997 1843 aa16.61■□□□□ 0.25
GPNMB-203ENST00000409458 FOCADQ5VW36 1801 aa16.61■□□□□ 0.25
GPNMB-203ENST00000409458 GPR75-ASB3A0A0A6YYF3 556 aa16.6■□□□□ 0.25
GPNMB-203ENST00000409458 F8W031 263 aaPredicted RBP16.6■□□□□ 0.25
GPNMB-203ENST00000409458 PPIP5K2O43314 1243 aa16.6■□□□□ 0.25
GPNMB-203ENST00000409458 GRIPAP1Q4V328 841 aa16.6■□□□□ 0.25
GPNMB-203ENST00000409458 RTKN2Q8IZC4 609 aa16.6■□□□□ 0.25
GPNMB-203ENST00000409458 STK11IPQ8N1F8 1099 aa16.6■□□□□ 0.25
GPNMB-203ENST00000409458 TNPO1Q92973 898 aaKnown RBP16.6■□□□□ 0.25
GPNMB-203ENST00000409458 GTF3C6Q969F1 213 aa16.6■□□□□ 0.25
GPNMB-203ENST00000409458 PSMD1Q99460 953 aa16.6■□□□□ 0.25
GPNMB-203ENST00000409458 COL4A5P29400 1685 aa16.6■□□□□ 0.25
GPNMB-203ENST00000409458 DTNBO60941 627 aa16.59■□□□□ 0.25
GPNMB-203ENST00000409458 PTGER2P43116 358 aa16.59■□□□□ 0.25
GPNMB-203ENST00000409458 NUCB2P80303 420 aa16.59■□□□□ 0.25
GPNMB-203ENST00000409458 EVX2Q03828 476 aa16.59■□□□□ 0.25
GPNMB-203ENST00000409458 MFSD6Q6ZSS7 791 aa16.59■□□□□ 0.25
GPNMB-203ENST00000409458 SLF2Q8IX21 1173 aa16.59■□□□□ 0.25
GPNMB-203ENST00000409458 CNNM2Q9H8M5 875 aa16.59■□□□□ 0.25
GPNMB-203ENST00000409458 PIM2Q9P1W9 311 aa16.59■□□□□ 0.25
GPNMB-203ENST00000409458 PPP1R1BQ9UD71 204 aaPredicted RBP16.59■□□□□ 0.25
GPNMB-203ENST00000409458 MKRN1Q9UHC7 482 aaKnown RBP16.59■□□□□ 0.25
GPNMB-203ENST00000409458 DAGLAQ9Y4D2 1042 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms