RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 CNNM2Q9H8M5 875 aa12.33□□□□□ -0.44
CACNA1C-216ENST00000399638 CHPF2Q9P2E5 772 aa12.33□□□□□ -0.44
CACNA1C-216ENST00000399638 AFMP43652 599 aa12.33□□□□□ -0.44
CACNA1C-216ENST00000399638 RNASELQ05823 741 aaKnown RBP12.33□□□□□ -0.44
CACNA1C-216ENST00000399638 CARD10Q9BWT7 1032 aa12.33□□□□□ -0.44
CACNA1C-216ENST00000399638 MAP3K11Q16584 847 aa12.32□□□□□ -0.44
CACNA1C-216ENST00000399638 IFI16Q16666 785 aaKnown RBP12.32□□□□□ -0.44
CACNA1C-216ENST00000399638 DCAF15Q66K64 600 aa12.32□□□□□ -0.44
CACNA1C-216ENST00000399638 HS2ST1Q7LGA3 356 aa12.32□□□□□ -0.44
CACNA1C-216ENST00000399638 EVI5LQ96CN4 794 aa12.32□□□□□ -0.44
CACNA1C-216ENST00000399638 IDI1Q13907 227 aa12.32□□□□□ -0.44
CACNA1C-216ENST00000399638 IGBP1P78318 339 aa12.32□□□□□ -0.44
CACNA1C-216ENST00000399638 SSH1Q8WYL5 1049 aa12.32□□□□□ -0.44
CACNA1C-216ENST00000399638 ORC3Q9UBD5 711 aaPredicted RBP12.32□□□□□ -0.44
CACNA1C-216ENST00000399638 HIBADHP31937 336 aaKnown RBP12.32□□□□□ -0.44
CACNA1C-216ENST00000399638 KRT79Q5XKE5 535 aa12.32□□□□□ -0.44
CACNA1C-216ENST00000399638 PRDM5Q9NQX1 630 aaPredicted RBP12.32□□□□□ -0.44
CACNA1C-216ENST00000399638 IL16Q14005 1332 aa12.32□□□□□ -0.44
CACNA1C-216ENST00000399638 PRIM1P49642 420 aaKnown RBP12.32□□□□□ -0.44
CACNA1C-216ENST00000399638 LBHD1Q9BQE6 289 aaPredicted RBP12.32□□□□□ -0.44
CACNA1C-216ENST00000399638 SYNDIG1Q9H7V2 258 aa12.32□□□□□ -0.44
CACNA1C-216ENST00000399638 CLIP2Q9UDT6 1046 aa12.32□□□□□ -0.44
CACNA1C-216ENST00000399638 POLIQ9UNA4 740 aa12.32□□□□□ -0.44
CACNA1C-216ENST00000399638 SHANK2Q9UPX8 1470 aa12.32□□□□□ -0.44
CACNA1C-216ENST00000399638 RYBPQ8N488 228 aaPredicted RBP12.31□□□□□ -0.44
CACNA1C-216ENST00000399638 MORC4Q8TE76 937 aa12.31□□□□□ -0.44
CACNA1C-216ENST00000399638 ZBTB43O43298 467 aa12.31□□□□□ -0.44
CACNA1C-216ENST00000399638 GMNNO75496 209 aa12.31□□□□□ -0.44
CACNA1C-216ENST00000399638 ARPP19P56211 112 aa12.31□□□□□ -0.44
CACNA1C-216ENST00000399638 KIF4BQ2VIQ3 1234 aa12.31□□□□□ -0.44
CACNA1C-216ENST00000399638 SFMBT1Q9UHJ3 866 aa12.31□□□□□ -0.44
CACNA1C-216ENST00000399638 RAD50Q92878 1312 aa12.31□□□□□ -0.44
CACNA1C-216ENST00000399638 IRX5P78411 483 aaPredicted RBP12.31□□□□□ -0.44
CACNA1C-216ENST00000399638 ZBTB16Q05516 673 aa12.31□□□□□ -0.44
CACNA1C-216ENST00000399638 RRAGBQ5VZM2 374 aa12.31□□□□□ -0.44
CACNA1C-216ENST00000399638 CEP57Q86XR8 500 aa12.31□□□□□ -0.44
CACNA1C-216ENST00000399638 SPATA17Q96L03 361 aa12.31□□□□□ -0.44
CACNA1C-216ENST00000399638 GCNAQ96QF7 691 aa12.31□□□□□ -0.44
CACNA1C-216ENST00000399638 PLEKHG3A1L390 1219 aa12.31□□□□□ -0.44
CACNA1C-216ENST00000399638 PLCB4Q15147 1175 aa12.31□□□□□ -0.44
CACNA1C-216ENST00000399638 BIN1O00499 593 aa12.31□□□□□ -0.44
CACNA1C-216ENST00000399638 CCT6AP40227 531 aaKnown RBP12.31□□□□□ -0.44
CACNA1C-216ENST00000399638 ARHGEF16Q5VV41 709 aa12.31□□□□□ -0.44
CACNA1C-216ENST00000399638 GBP7Q8N8V2 638 aaPredicted RBP12.31□□□□□ -0.44
CACNA1C-216ENST00000399638 SCAND2PQ9GZW5 306 aaPredicted RBP12.31□□□□□ -0.44
CACNA1C-216ENST00000399638 DENND2AQ9ULE3 1009 aa12.31□□□□□ -0.44
CACNA1C-216ENST00000399638 FOXD4Q12950 439 aaPredicted RBP12.3□□□□□ -0.44
CACNA1C-216ENST00000399638 CCDC170Q8IYT3 715 aa12.3□□□□□ -0.44
CACNA1C-216ENST00000399638 ITM2BQ9Y287 266 aa12.3□□□□□ -0.44
CACNA1C-216ENST00000399638 DKC1O60832 514 aaKnown RBP eCLIP12.3□□□□□ -0.44
CACNA1C-216ENST00000399638 HCLS1P14317 486 aaPredicted RBP12.3□□□□□ -0.44
CACNA1C-216ENST00000399638 LMBR1LQ6UX01 489 aa12.3□□□□□ -0.44
CACNA1C-216ENST00000399638 C2orf69Q8N8R5 385 aa12.3□□□□□ -0.44
CACNA1C-216ENST00000399638 ZHX1Q9UKY1 873 aaPredicted RBP12.3□□□□□ -0.44
CACNA1C-216ENST00000399638 CTTNBP2Q8WZ74 1663 aa12.3□□□□□ -0.44
CACNA1C-216ENST00000399638 BICDL2A1A5D9 508 aa12.3□□□□□ -0.44
CACNA1C-216ENST00000399638 VIMP08670 466 aaKnown RBP12.3□□□□□ -0.44
CACNA1C-216ENST00000399638 DOK7Q18PE1 504 aa12.3□□□□□ -0.44
CACNA1C-216ENST00000399638 DDX12PQ92771 950 aa12.3□□□□□ -0.44
CACNA1C-216ENST00000399638 TBC1D31Q96DN5 1066 aa12.3□□□□□ -0.44
CACNA1C-216ENST00000399638 NAA15Q9BXJ9 866 aaKnown RBP12.3□□□□□ -0.44
CACNA1C-216ENST00000399638 SCAF11Q99590 1463 aaKnown RBP12.3□□□□□ -0.44
CACNA1C-216ENST00000399638 SARNPP82979 210 aaKnown RBP12.3□□□□□ -0.44
CACNA1C-216ENST00000399638 UBXN4Q92575 508 aa12.3□□□□□ -0.44
CACNA1C-216ENST00000399638 RPS6KC1Q96S38 1066 aa12.3□□□□□ -0.44
CACNA1C-216ENST00000399638 RMND1Q9NWS8 449 aa12.3□□□□□ -0.44
CACNA1C-216ENST00000399638 SFPQP23246 707 aaKnown RBP eCLIP12.3□□□□□ -0.44
CACNA1C-216ENST00000399638 DDX27Q96GQ7 796 aaKnown RBP12.3□□□□□ -0.44
CACNA1C-216ENST00000399638 APOL6Q9BWW8 343 aa12.3□□□□□ -0.44
CACNA1C-216ENST00000399638 ZKSCAN5Q9Y2L8 839 aa12.3□□□□□ -0.44
CACNA1C-216ENST00000399638 KLF18A0A0U1RQI7 1052 aa12.29□□□□□ -0.44
CACNA1C-216ENST00000399638 ZRANB2O95218 330 aaKnown RBP eCLIP12.29□□□□□ -0.44
CACNA1C-216ENST00000399638 DCAF17Q5H9S7 520 aaPredicted RBP12.29□□□□□ -0.44
CACNA1C-216ENST00000399638 BAG1Q99933 345 aaPredicted RBP12.29□□□□□ -0.44
CACNA1C-216ENST00000399638 RNF216Q9NWF9 866 aaPredicted RBP12.29□□□□□ -0.44
CACNA1C-216ENST00000399638 ITSN2Q9NZM3 1697 aa12.29□□□□□ -0.44
CACNA1C-216ENST00000399638 PIK3R4Q99570 1358 aa12.29□□□□□ -0.44
CACNA1C-216ENST00000399638 SYCE3A1L190 88 aa12.29□□□□□ -0.44
CACNA1C-216ENST00000399638 FSIP1Q8NA03 581 aa12.29□□□□□ -0.44
CACNA1C-216ENST00000399638 UIMC1Q96RL1 719 aa12.29□□□□□ -0.44
CACNA1C-216ENST00000399638 ASXL1Q8IXJ9 1541 aa12.29□□□□□ -0.44
CACNA1C-216ENST00000399638 TMTC2Q8N394 836 aa12.29□□□□□ -0.44
CACNA1C-216ENST00000399638 DDX17Q92841 729 aaKnown RBP12.29□□□□□ -0.44
CACNA1C-216ENST00000399638 PLIN2Q99541 437 aa12.29□□□□□ -0.44
CACNA1C-216ENST00000399638 PDE4DQ08499 809 aa12.29□□□□□ -0.44
CACNA1C-216ENST00000399638 ITKQ08881 620 aa12.29□□□□□ -0.44
CACNA1C-216ENST00000399638 ANKRD35Q8N283 1001 aa12.29□□□□□ -0.44
CACNA1C-216ENST00000399638 MRRFQ96E11 262 aaKnown RBP12.29□□□□□ -0.44
CACNA1C-216ENST00000399638 KIF5AQ12840 1032 aa12.29□□□□□ -0.44
CACNA1C-216ENST00000399638 ANO10Q9NW15 660 aa12.29□□□□□ -0.44
CACNA1C-216ENST00000399638 ABCA5Q8WWZ7 1642 aa12.29□□□□□ -0.44
CACNA1C-216ENST00000399638 RTL9Q8NET4 1388 aa12.28□□□□□ -0.44
CACNA1C-216ENST00000399638 GIPC1O14908 333 aa12.28□□□□□ -0.44
CACNA1C-216ENST00000399638 CCNA1P78396 465 aa12.28□□□□□ -0.44
CACNA1C-216ENST00000399638 RETREG2Q8NC44 543 aa12.28□□□□□ -0.44
CACNA1C-216ENST00000399638 SKA2Q8WVK7 121 aaPredicted RBP12.28□□□□□ -0.44
CACNA1C-216ENST00000399638 FAM204AQ9H8W3 233 aa12.28□□□□□ -0.44
CACNA1C-216ENST00000399638 COL17A1Q9UMD9 1497 aaPredicted RBP12.28□□□□□ -0.44
CACNA1C-216ENST00000399638 ARHGEF11O15085 1522 aa12.28□□□□□ -0.44
CACNA1C-216ENST00000399638 CDK13Q14004 1512 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms