RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 DIS3L2Q8IYB7 885 aaKnown RBP12.81□□□□□ -0.36
IFT140-202ENST00000397417 CNNM2Q9H8M5 875 aa12.81□□□□□ -0.36
IFT140-202ENST00000397417 CLEC11AQ9Y240 323 aa12.81□□□□□ -0.36
IFT140-202ENST00000397417 ZC3H13Q5T200 1668 aaKnown RBP12.81□□□□□ -0.36
IFT140-202ENST00000397417 PTCH1Q13635 1447 aa12.81□□□□□ -0.36
IFT140-202ENST00000397417 SFPQP23246 707 aaKnown RBP eCLIP12.81□□□□□ -0.36
IFT140-202ENST00000397417 LRSAM1Q6UWE0 723 aa12.81□□□□□ -0.36
IFT140-202ENST00000397417 PIK3AP1Q6ZUJ8 805 aa12.81□□□□□ -0.36
IFT140-202ENST00000397417 CCDC186Q7Z3E2 898 aa12.81□□□□□ -0.36
IFT140-202ENST00000397417 CPXCR1Q8N123 301 aa12.81□□□□□ -0.36
IFT140-202ENST00000397417 JDP2Q8WYK2 163 aa12.81□□□□□ -0.36
IFT140-202ENST00000397417 MRPS27Q92552 414 aaKnown RBP12.81□□□□□ -0.36
IFT140-202ENST00000397417 CELF1Q92879 486 aaKnown RBP12.81□□□□□ -0.36
IFT140-202ENST00000397417 PALLDQ8WX93 1383 aa12.81□□□□□ -0.36
IFT140-202ENST00000397417 ANKARQ7Z5J8 1434 aa12.81□□□□□ -0.36
IFT140-202ENST00000397417 MATR3P43243 847 aaKnown RBP eCLIP12.81□□□□□ -0.36
IFT140-202ENST00000397417 PTPN21Q16825 1174 aa12.81□□□□□ -0.36
IFT140-202ENST00000397417 IFNL3Q8IZI9 196 aa12.81□□□□□ -0.36
IFT140-202ENST00000397417 ANKRD2Q9GZV1 360 aa12.81□□□□□ -0.36
IFT140-202ENST00000397417 DDX19AQ9NUU7 478 aaKnown RBP12.81□□□□□ -0.36
IFT140-202ENST00000397417 FBXO3Q9UK99 471 aa12.81□□□□□ -0.36
IFT140-202ENST00000397417 CEP131Q9UPN4 1083 aa12.81□□□□□ -0.36
IFT140-202ENST00000397417 IL25Q9H293 177 aa12.8□□□□□ -0.36
IFT140-202ENST00000397417 STK32BQ9NY57 414 aa12.8□□□□□ -0.36
IFT140-202ENST00000397417 MAST3O60307 1309 aa12.8□□□□□ -0.36
IFT140-202ENST00000397417 CALM1P0DP23 149 aa12.8□□□□□ -0.36
IFT140-202ENST00000397417 CALM2P0DP24 149 aa12.8□□□□□ -0.36
IFT140-202ENST00000397417 CALM3P0DP25 149 aa12.8□□□□□ -0.36
IFT140-202ENST00000397417 RBM17Q96I25 401 aaKnown RBP12.8□□□□□ -0.36
IFT140-202ENST00000397417 PDCL3Q9H2J4 239 aa12.8□□□□□ -0.36
IFT140-202ENST00000397417 RNF216Q9NWF9 866 aaPredicted RBP12.8□□□□□ -0.36
IFT140-202ENST00000397417 AFF2P51816 1311 aa12.8□□□□□ -0.36
IFT140-202ENST00000397417 FRMPD1Q5SYB0 1578 aa12.8□□□□□ -0.36
IFT140-202ENST00000397417 MED14O60244 1454 aa12.8□□□□□ -0.36
IFT140-202ENST00000397417 C1orf167Q5SNV9 1468 aa12.8□□□□□ -0.36
IFT140-202ENST00000397417 KIF13AQ9H1H9 1805 aa12.8□□□□□ -0.36
IFT140-202ENST00000397417 VSIG10Q8N0Z9 540 aa12.8□□□□□ -0.36
IFT140-202ENST00000397417 ZSCAN16Q9H4T2 348 aaPredicted RBP12.8□□□□□ -0.36
IFT140-202ENST00000397417 TCP11L1Q9NUJ3 509 aa12.8□□□□□ -0.36
IFT140-202ENST00000397417 SCAF8Q9UPN6 1271 aaKnown RBP12.8□□□□□ -0.36
IFT140-202ENST00000397417 PIK3C2BO00750 1634 aa12.8□□□□□ -0.36
IFT140-202ENST00000397417 ADCY9O60503 1353 aa12.8□□□□□ -0.36
IFT140-202ENST00000397417 SERPINB2P05120 415 aa12.79□□□□□ -0.36
IFT140-202ENST00000397417 TYRO3Q06418 890 aa12.79□□□□□ -0.36
IFT140-202ENST00000397417 RASGRF1Q13972 1273 aa12.79□□□□□ -0.36
IFT140-202ENST00000397417 USH1GQ495M9 461 aa12.79□□□□□ -0.36
IFT140-202ENST00000397417 SMARCE1Q969G3 411 aa12.79□□□□□ -0.36
IFT140-202ENST00000397417 HOMER2Q9NSB8 354 aa12.79□□□□□ -0.36
IFT140-202ENST00000397417 CLRN2A0PK11 232 aa12.79□□□□□ -0.36
IFT140-202ENST00000397417 TRIM75PA6NK02 468 aa12.79□□□□□ -0.36
IFT140-202ENST00000397417 H0YIN7 160 aa12.79□□□□□ -0.36
IFT140-202ENST00000397417 TNNT1P13805 278 aa12.79□□□□□ -0.36
IFT140-202ENST00000397417 LRRC47Q8N1G4 583 aaKnown RBP12.79□□□□□ -0.36
IFT140-202ENST00000397417 PIH1D3Q9NQM4 214 aaKnown RBP12.79□□□□□ -0.36
IFT140-202ENST00000397417 TRPC5Q9UL62 973 aaPredicted RBP12.79□□□□□ -0.36
IFT140-202ENST00000397417 PPIP5K2O43314 1243 aa12.79□□□□□ -0.36
IFT140-202ENST00000397417 TOP1P11387 765 aaKnown RBP12.79□□□□□ -0.36
IFT140-202ENST00000397417 GSTO1P78417 241 aa12.79□□□□□ -0.36
IFT140-202ENST00000397417 CPVLQ9H3G5 476 aa12.79□□□□□ -0.36
IFT140-202ENST00000397417 PTGS1P23219 599 aa12.78□□□□□ -0.36
IFT140-202ENST00000397417 MCAMP43121 646 aa12.78□□□□□ -0.36
IFT140-202ENST00000397417 AKNAD1Q5T1N1 836 aa12.78□□□□□ -0.36
IFT140-202ENST00000397417 KRT27Q7Z3Y8 459 aa12.78□□□□□ -0.36
IFT140-202ENST00000397417 LCORLQ8N3X6 602 aa12.78□□□□□ -0.36
IFT140-202ENST00000397417 COBLO75128 1261 aa12.78□□□□□ -0.36
IFT140-202ENST00000397417 KRT40Q6A162 431 aa12.78□□□□□ -0.36
IFT140-202ENST00000397417 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.78□□□□□ -0.36
IFT140-202ENST00000397417 V9GYY5 206 aaPredicted RBP12.78□□□□□ -0.36
IFT140-202ENST00000397417 USP32Q8NFA0 1604 aa12.78□□□□□ -0.36
IFT140-202ENST00000397417 UQCRHLA0A096LP55 91 aa12.78□□□□□ -0.36
IFT140-202ENST00000397417 FAM196BA6NMK8 535 aa12.78□□□□□ -0.36
IFT140-202ENST00000397417 UQCRHP07919 91 aa12.78□□□□□ -0.36
IFT140-202ENST00000397417 PRDX5P30044 214 aa12.78□□□□□ -0.36
IFT140-202ENST00000397417 TBC1D9BQ66K14 1250 aa12.78□□□□□ -0.36
IFT140-202ENST00000397417 GPKOWQ92917 476 aaPredicted RBP eCLIP12.78□□□□□ -0.36
IFT140-202ENST00000397417 DYNLL2Q96FJ2 89 aa12.78□□□□□ -0.36
IFT140-202ENST00000397417 ADGRB2O60241 1585 aa12.78□□□□□ -0.36
IFT140-202ENST00000397417 FRMPD2Q68DX3 1309 aaPredicted RBP12.78□□□□□ -0.36
IFT140-202ENST00000397417 MYO1BO43795 1136 aa12.78□□□□□ -0.36
IFT140-202ENST00000397417 SPICE1Q8N0Z3 855 aa12.78□□□□□ -0.36
IFT140-202ENST00000397417 INTS4Q96HW7 963 aaKnown RBP12.78□□□□□ -0.36
IFT140-202ENST00000397417 USP28Q96RU2 1077 aa12.78□□□□□ -0.36
IFT140-202ENST00000397417 PRM3Q9NNZ6 103 aa12.78□□□□□ -0.36
IFT140-202ENST00000397417 LMBRD1Q9NUN5 540 aa12.78□□□□□ -0.36
IFT140-202ENST00000397417 MROH5Q6ZUA9 1318 aa12.77□□□□□ -0.36
IFT140-202ENST00000397417 ARHGEF28Q8N1W1 1705 aaKnown RBP12.77□□□□□ -0.36
IFT140-202ENST00000397417 COL3A1P02461 1466 aaPredicted RBP12.77□□□□□ -0.36
IFT140-202ENST00000397417 BTBD18B2RXH4 712 aa12.77□□□□□ -0.36
IFT140-202ENST00000397417 RRAGBQ5VZM2 374 aa12.77□□□□□ -0.36
IFT140-202ENST00000397417 MARCH10Q8NA82 808 aaPredicted RBP12.77□□□□□ -0.36
IFT140-202ENST00000397417 STAP2Q9UGK3 403 aa12.77□□□□□ -0.36
IFT140-202ENST00000397417 TAF6LQ9Y6J9 622 aa12.77□□□□□ -0.36
IFT140-202ENST00000397417 KIF24Q5T7B8 1368 aa12.77□□□□□ -0.36
IFT140-202ENST00000397417 IFT172Q9UG01 1749 aa12.77□□□□□ -0.37
IFT140-202ENST00000397417 TCP10L2B9ZVM9 353 aa12.77□□□□□ -0.37
IFT140-202ENST00000397417 SORBS3O60504 671 aa12.77□□□□□ -0.37
IFT140-202ENST00000397417 MMP10P09238 476 aa12.77□□□□□ -0.37
IFT140-202ENST00000397417 PPARAQ07869 468 aa12.77□□□□□ -0.37
IFT140-202ENST00000397417 SCRN1Q12765 414 aa12.77□□□□□ -0.37
IFT140-202ENST00000397417 MAP4K1Q92918 833 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 166.7 ms