RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 POTEIP0CG38 1075 aa19.86■□□□□ 0.77
AP1S3-202ENST00000396653 POTEJP0CG39 1038 aa19.86■□□□□ 0.77
AP1S3-202ENST00000396653 BTDP43251 543 aa19.86■□□□□ 0.77
AP1S3-202ENST00000396653 RBM46Q8TBY0 533 aaKnown RBP19.86■□□□□ 0.77
AP1S3-202ENST00000396653 NOL10Q9BSC4 688 aaKnown RBP19.86■□□□□ 0.77
AP1S3-202ENST00000396653 GGA3Q9NZ52 723 aa19.86■□□□□ 0.77
AP1S3-202ENST00000396653 ZNF532Q9HCE3 1301 aa19.85■□□□□ 0.77
AP1S3-202ENST00000396653 TRIM6-TRIM34B2RNG4 842 aa19.85■□□□□ 0.77
AP1S3-202ENST00000396653 BAG3O95817 575 aa19.85■□□□□ 0.77
AP1S3-202ENST00000396653 GSPT1P15170 499 aaKnown RBP19.85■□□□□ 0.77
AP1S3-202ENST00000396653 PPP4CP60510 307 aa19.85■□□□□ 0.77
AP1S3-202ENST00000396653 CHADLQ6NUI6 762 aa19.85■□□□□ 0.77
AP1S3-202ENST00000396653 ADGRA1Q86SQ6 560 aa19.85■□□□□ 0.77
AP1S3-202ENST00000396653 APOBEC3FQ8IUX4 373 aaKnown RBP19.85■□□□□ 0.77
AP1S3-202ENST00000396653 CLEC11AQ9Y240 323 aa19.85■□□□□ 0.77
AP1S3-202ENST00000396653 PLCG2P16885 1265 aa19.84■□□□□ 0.77
AP1S3-202ENST00000396653 ANGEL2Q5VTE6 544 aaKnown RBP19.84■□□□□ 0.77
AP1S3-202ENST00000396653 FKBP1CQ5VVH2 108 aa19.84■□□□□ 0.77
AP1S3-202ENST00000396653 DCPSQ96C86 337 aaKnown RBP19.84■□□□□ 0.77
AP1S3-202ENST00000396653 TDRD3Q9H7E2 651 aaKnown RBP19.84■□□□□ 0.77
AP1S3-202ENST00000396653 TMOD2Q9NZR1 351 aa19.84■□□□□ 0.77
AP1S3-202ENST00000396653 ZNF70Q9UC06 446 aaPredicted RBP19.84■□□□□ 0.77
AP1S3-202ENST00000396653 TRPM7Q96QT4 1865 aa19.84■□□□□ 0.77
AP1S3-202ENST00000396653 ASTN2O75129 1339 aaPredicted RBP19.83■□□□□ 0.77
AP1S3-202ENST00000396653 RNF113AO15541 343 aaKnown RBP19.83■□□□□ 0.77
AP1S3-202ENST00000396653 TNFAIP1Q13829 316 aa19.83■□□□□ 0.77
AP1S3-202ENST00000396653 CDC42EP5Q6NZY7 148 aa19.83■□□□□ 0.77
AP1S3-202ENST00000396653 SMC1BQ8NDV3 1235 aa19.83■□□□□ 0.77
AP1S3-202ENST00000396653 APPBP2Q92624 585 aa19.83■□□□□ 0.77
AP1S3-202ENST00000396653 CLRN2A0PK11 232 aa19.82■□□□□ 0.76
AP1S3-202ENST00000396653 RGS3P49796 1198 aa19.82■□□□□ 0.76
AP1S3-202ENST00000396653 RHBDL3P58872 404 aa19.82■□□□□ 0.76
AP1S3-202ENST00000396653 BMP2KLQ5H9B9 411 aa19.82■□□□□ 0.76
AP1S3-202ENST00000396653 RILPL2Q969X0 211 aa19.82■□□□□ 0.76
AP1S3-202ENST00000396653 AATFQ9NY61 560 aaKnown RBP eCLIP19.82■□□□□ 0.76
AP1S3-202ENST00000396653 PPP2R3BQ9Y5P8 575 aa19.82■□□□□ 0.76
AP1S3-202ENST00000396653 GTF3C3Q9Y5Q9 886 aa19.82■□□□□ 0.76
AP1S3-202ENST00000396653 NAV1Q8NEY1 1877 aa19.82■□□□□ 0.76
AP1S3-202ENST00000396653 NPM3O75607 178 aaKnown RBP19.81■□□□□ 0.76
AP1S3-202ENST00000396653 SDSP20132 328 aa19.81■□□□□ 0.76
AP1S3-202ENST00000396653 FSTL1Q12841 308 aa19.81■□□□□ 0.76
AP1S3-202ENST00000396653 CDC37L1Q7L3B6 337 aa19.81■□□□□ 0.76
AP1S3-202ENST00000396653 SKAP1Q86WV1 359 aa19.81■□□□□ 0.76
AP1S3-202ENST00000396653 SULF1Q8IWU6 871 aa19.81■□□□□ 0.76
AP1S3-202ENST00000396653 RIOK1Q9BRS2 568 aaKnown RBP19.81■□□□□ 0.76
AP1S3-202ENST00000396653 IDI2Q9BXS1 227 aa19.81■□□□□ 0.76
AP1S3-202ENST00000396653 VEZTQ9HBM0 779 aa19.81■□□□□ 0.76
AP1S3-202ENST00000396653 USP40Q9NVE5 1235 aa19.81■□□□□ 0.76
AP1S3-202ENST00000396653 DDX60LQ5H9U9 1706 aaKnown RBP19.81■□□□□ 0.76
AP1S3-202ENST00000396653 RPAP1Q9BWH6 1393 aaPredicted RBP19.81■□□□□ 0.76
AP1S3-202ENST00000396653 COL2A1P02458 1487 aaPredicted RBP19.8■□□□□ 0.76
AP1S3-202ENST00000396653 MAGEB6P1A0A0J9YX57 407 aa19.8■□□□□ 0.76
AP1S3-202ENST00000396653 HIP1O00291 1037 aa19.8■□□□□ 0.76
AP1S3-202ENST00000396653 TNNI2P48788 182 aa19.8■□□□□ 0.76
AP1S3-202ENST00000396653 ZMYM1Q5SVZ6 1142 aa19.8■□□□□ 0.76
AP1S3-202ENST00000396653 KRT26Q7Z3Y9 468 aa19.8■□□□□ 0.76
AP1S3-202ENST00000396653 FAM83AQ86UY5 434 aa19.8■□□□□ 0.76
AP1S3-202ENST00000396653 MYH1P12882 1939 aa19.79■□□□□ 0.76
AP1S3-202ENST00000396653 MAP1SQ66K74 1059 aaPredicted RBP19.79■□□□□ 0.76
AP1S3-202ENST00000396653 MIGA1Q8NAN2 632 aa19.79■□□□□ 0.76
AP1S3-202ENST00000396653 ENTPD3O75355 529 aa19.78■□□□□ 0.76
AP1S3-202ENST00000396653 WDHD1O75717 1129 aaPredicted RBP19.78■□□□□ 0.76
AP1S3-202ENST00000396653 CHGBP05060 677 aa19.78■□□□□ 0.76
AP1S3-202ENST00000396653 DYNLL1P63167 89 aaKnown RBP19.78■□□□□ 0.76
AP1S3-202ENST00000396653 TEX11Q8IYF3 940 aa19.78■□□□□ 0.76
AP1S3-202ENST00000396653 SH3RF3Q8TEJ3 882 aaPredicted RBP19.78■□□□□ 0.76
AP1S3-202ENST00000396653 OSBP2Q969R2 916 aa19.78■□□□□ 0.76
AP1S3-202ENST00000396653 CNTNAP1P78357 1384 aa19.78■□□□□ 0.76
AP1S3-202ENST00000396653 SLFNL1Q499Z3 407 aa19.77■□□□□ 0.76
AP1S3-202ENST00000396653 AIDAQ96BJ3 306 aa19.77■□□□□ 0.76
AP1S3-202ENST00000396653 GLIS2Q9BZE0 524 aaPredicted RBP19.77■□□□□ 0.76
AP1S3-202ENST00000396653 PUS7LQ9H0K6 701 aaKnown RBP19.77■□□□□ 0.76
AP1S3-202ENST00000396653 HELLSQ9NRZ9 838 aa19.77■□□□□ 0.76
AP1S3-202ENST00000396653 TCP10L2B9ZVM9 353 aa19.76■□□□□ 0.75
AP1S3-202ENST00000396653 ADM5C9JUS6 153 aa19.76■□□□□ 0.75
AP1S3-202ENST00000396653 MBD4O95243 580 aa19.76■□□□□ 0.75
AP1S3-202ENST00000396653 ITGBL1O95965 494 aaPredicted RBP19.76■□□□□ 0.75
AP1S3-202ENST00000396653 CACNB3P54284 484 aa19.76■□□□□ 0.75
AP1S3-202ENST00000396653 NFIAQ12857 509 aa19.76■□□□□ 0.75
AP1S3-202ENST00000396653 LCORLQ8N3X6 602 aa19.76■□□□□ 0.75
AP1S3-202ENST00000396653 FAM151AQ8WW52 585 aa19.76■□□□□ 0.75
AP1S3-202ENST00000396653 CRNKL1Q9BZJ0 848 aaKnown RBP19.76■□□□□ 0.75
AP1S3-202ENST00000396653 DEFB129Q9H1M3 183 aa19.76■□□□□ 0.75
AP1S3-202ENST00000396653 DIAPH3Q9NSV4 1193 aa19.76■□□□□ 0.75
AP1S3-202ENST00000396653 FAM198AQ9UFP1 575 aa19.76■□□□□ 0.75
AP1S3-202ENST00000396653 PASKQ96RG2 1323 aa19.76■□□□□ 0.75
AP1S3-202ENST00000396653 ATRNL1Q5VV63 1379 aa19.75■□□□□ 0.75
AP1S3-202ENST00000396653 RASA3Q14644 834 aa19.75■□□□□ 0.75
AP1S3-202ENST00000396653 USP48Q86UV5 1035 aa19.75■□□□□ 0.75
AP1S3-202ENST00000396653 ARMT1Q9H993 441 aa19.75■□□□□ 0.75
AP1S3-202ENST00000396653 BAZ2AQ9UIF9 1905 aaKnown RBP19.74■□□□□ 0.75
AP1S3-202ENST00000396653 M0R2C6 588 aa19.74■□□□□ 0.75
AP1S3-202ENST00000396653 GPAA1O43292 621 aa19.74■□□□□ 0.75
AP1S3-202ENST00000396653 GNAT2P19087 354 aa19.74■□□□□ 0.75
AP1S3-202ENST00000396653 NMIQ13287 307 aaPredicted RBP19.74■□□□□ 0.75
AP1S3-202ENST00000396653 DDX4Q9NQI0 724 aaKnown RBP19.74■□□□□ 0.75
AP1S3-202ENST00000396653 LAMB1P07942 1786 aa19.74■□□□□ 0.75
AP1S3-202ENST00000396653 FLT1P17948 1338 aa19.74■□□□□ 0.75
AP1S3-202ENST00000396653 RAD50Q92878 1312 aa19.74■□□□□ 0.75
AP1S3-202ENST00000396653 PAPPA2Q9BXP8 1791 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms