RNA–Protein interactions for RNA: ENST00000396389.5

TUBB-208, Transcript of tubulin beta class I, humanhuman

TSL 5 BASIC

Gene TUBB, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-208ENST00000396389 HOXA10P31260 410 aaPredicted RBP12.06□□□□□ -0.48
TUBB-208ENST00000396389 AOC3Q16853 763 aa12.06□□□□□ -0.48
TUBB-208ENST00000396389 GGA1Q9UJY5 639 aa12.06□□□□□ -0.48
TUBB-208ENST00000396389 KLRG2A4D1S0 409 aaPredicted RBP12.05□□□□□ -0.48
TUBB-208ENST00000396389 F13A1P00488 732 aa12.05□□□□□ -0.48
TUBB-208ENST00000396389 ZAP70P43403 619 aa12.05□□□□□ -0.48
TUBB-208ENST00000396389 DALRD3Q5D0E6 543 aaKnown RBP12.05□□□□□ -0.48
TUBB-208ENST00000396389 CCDC158Q5M9N0 1113 aa12.05□□□□□ -0.48
TUBB-208ENST00000396389 RUFY3Q7L099 469 aa12.05□□□□□ -0.48
TUBB-208ENST00000396389 TBC1D16Q8TBP0 767 aa12.05□□□□□ -0.48
TUBB-208ENST00000396389 PI4K2BQ8TCG2 481 aa12.05□□□□□ -0.48
TUBB-208ENST00000396389 LPIN2Q92539 896 aa12.05□□□□□ -0.48
TUBB-208ENST00000396389 AKAP2Q9Y2D5 859 aa12.05□□□□□ -0.48
TUBB-208ENST00000396389 ATP6V0A2Q9Y487 856 aa12.05□□□□□ -0.48
TUBB-208ENST00000396389 LIG1P18858 919 aa12.05□□□□□ -0.48
TUBB-208ENST00000396389 MCAMP43121 646 aa12.05□□□□□ -0.48
TUBB-208ENST00000396389 CNKSR1Q969H4 720 aa12.05□□□□□ -0.48
TUBB-208ENST00000396389 CRAMP1Q96RY5 1269 aa12.05□□□□□ -0.48
TUBB-208ENST00000396389 RASSF7Q02833 373 aa12.04□□□□□ -0.48
TUBB-208ENST00000396389 RASGRF1Q13972 1273 aa12.04□□□□□ -0.48
TUBB-208ENST00000396389 NECAB1Q8N987 351 aa12.04□□□□□ -0.48
TUBB-208ENST00000396389 FAM84BQ96KN1 310 aaPredicted RBP12.04□□□□□ -0.48
TUBB-208ENST00000396389 SMC3Q9UQE7 1217 aa12.04□□□□□ -0.48
TUBB-208ENST00000396389 XDHP47989 1333 aa12.04□□□□□ -0.48
TUBB-208ENST00000396389 USP27XA6NNY8 438 aa12.04□□□□□ -0.48
TUBB-208ENST00000396389 IDH1O75874 414 aaKnown RBP12.04□□□□□ -0.48
TUBB-208ENST00000396389 IRX5P78411 483 aaPredicted RBP12.04□□□□□ -0.48
TUBB-208ENST00000396389 COL9A3Q14050 684 aaPredicted RBP12.04□□□□□ -0.48
TUBB-208ENST00000396389 GPATCH3Q96I76 525 aa12.04□□□□□ -0.48
TUBB-208ENST00000396389 FEZ1Q99689 392 aa12.04□□□□□ -0.48
TUBB-208ENST00000396389 N4BP2Q86UW6 1770 aaPredicted RBP12.04□□□□□ -0.48
TUBB-208ENST00000396389 TPD52L1Q16890 204 aaPredicted RBP12.04□□□□□ -0.48
TUBB-208ENST00000396389 CAVIN4Q5BKX8 364 aa12.04□□□□□ -0.48
TUBB-208ENST00000396389 TRIM5Q9C035 493 aa12.04□□□□□ -0.48
TUBB-208ENST00000396389 OSBPL3Q9H4L5 887 aa12.04□□□□□ -0.48
TUBB-208ENST00000396389 TFIP11Q9UBB9 837 aaKnown RBP12.04□□□□□ -0.48
TUBB-208ENST00000396389 DDX41Q9UJV9 622 aaKnown RBP12.04□□□□□ -0.48
TUBB-208ENST00000396389 SPEF2Q9C093 1822 aa12.04□□□□□ -0.48
TUBB-208ENST00000396389 COL24A1Q17RW2 1714 aa12.03□□□□□ -0.48
TUBB-208ENST00000396389 C10orf71Q711Q0 1435 aa12.03□□□□□ -0.48
TUBB-208ENST00000396389 A0A087WWV3 80 aa12.03□□□□□ -0.48
TUBB-208ENST00000396389 GJB2P29033 226 aa12.03□□□□□ -0.48
TUBB-208ENST00000396389 CWC27Q6UX04 472 aaKnown RBP12.03□□□□□ -0.48
TUBB-208ENST00000396389 FSD1Q9BTV5 496 aa12.03□□□□□ -0.48
TUBB-208ENST00000396389 ZC3H12CQ9C0D7 883 aaKnown RBP12.03□□□□□ -0.48
TUBB-208ENST00000396389 SNX14Q9Y5W7 946 aa12.03□□□□□ -0.48
TUBB-208ENST00000396389 CCDC144BQ3MJ40 725 aa12.03□□□□□ -0.48
TUBB-208ENST00000396389 ARHGAP27Q6ZUM4 889 aa12.03□□□□□ -0.48
TUBB-208ENST00000396389 CCDC144CPQ8IYA2 1237 aa12.03□□□□□ -0.48
TUBB-208ENST00000396389 TMEM87AQ8NBN3 555 aa12.03□□□□□ -0.48
TUBB-208ENST00000396389 CACTINQ8WUQ7 758 aaKnown RBP12.03□□□□□ -0.48
TUBB-208ENST00000396389 TRMT1Q9NXH9 659 aaKnown RBP12.03□□□□□ -0.48
TUBB-208ENST00000396389 MRVI1Q9Y6F6 885 aa12.03□□□□□ -0.48
TUBB-208ENST00000396389 ZNF609O15014 1411 aa12.02□□□□□ -0.48
TUBB-208ENST00000396389 FGFR2P21802 821 aa12.02□□□□□ -0.48
TUBB-208ENST00000396389 HIBADHP31937 336 aaKnown RBP12.02□□□□□ -0.48
TUBB-208ENST00000396389 KMT5BQ4FZB7 885 aa12.02□□□□□ -0.48
TUBB-208ENST00000396389 ANO6Q4KMQ2 910 aa12.02□□□□□ -0.48
TUBB-208ENST00000396389 SP8Q8IXZ3 490 aa12.02□□□□□ -0.48
TUBB-208ENST00000396389 CCDC112Q8NEF3 446 aa12.02□□□□□ -0.48
TUBB-208ENST00000396389 KIF18AQ8NI77 898 aa12.02□□□□□ -0.48
TUBB-208ENST00000396389 SEC62Q99442 399 aaKnown RBP12.02□□□□□ -0.48
TUBB-208ENST00000396389 ANKRD2Q9GZV1 360 aa12.02□□□□□ -0.48
TUBB-208ENST00000396389 ANKRD31Q8N7Z5 1873 aa12.02□□□□□ -0.49
TUBB-208ENST00000396389 PPIP5K2O43314 1243 aa12.02□□□□□ -0.49
TUBB-208ENST00000396389 CCDC192P0DO97 292 aa12.02□□□□□ -0.49
TUBB-208ENST00000396389 TERF2Q15554 542 aa12.02□□□□□ -0.49
TUBB-208ENST00000396389 STYK1Q6J9G0 422 aa12.02□□□□□ -0.49
TUBB-208ENST00000396389 CBX8Q9HC52 389 aa12.02□□□□□ -0.49
TUBB-208ENST00000396389 KCNG1Q9UIX4 513 aa12.02□□□□□ -0.49
TUBB-208ENST00000396389 SALL3Q9BXA9 1300 aa12.02□□□□□ -0.49
TUBB-208ENST00000396389 RTL9Q8NET4 1388 aa12.02□□□□□ -0.49
TUBB-208ENST00000396389 GOLGA6L6A8MZA4 724 aa12.01□□□□□ -0.49
TUBB-208ENST00000396389 TYRO3Q06418 890 aa12.01□□□□□ -0.49
TUBB-208ENST00000396389 SLC4A8Q2Y0W8 1093 aa12.01□□□□□ -0.49
TUBB-208ENST00000396389 ZSCAN25Q6NSZ9 544 aa12.01□□□□□ -0.49
TUBB-208ENST00000396389 TTC6Q86TZ1 520 aa12.01□□□□□ -0.49
TUBB-208ENST00000396389 HMG20BQ9P0W2 317 aa12.01□□□□□ -0.49
TUBB-208ENST00000396389 ZNF215Q9UL58 517 aaPredicted RBP12.01□□□□□ -0.49
TUBB-208ENST00000396389 MYH3P11055 1940 aa12.01□□□□□ -0.49
TUBB-208ENST00000396389 RAD17O75943 681 aa12.01□□□□□ -0.49
TUBB-208ENST00000396389 GLRX3O76003 335 aaKnown RBP12.01□□□□□ -0.49
TUBB-208ENST00000396389 CASTP20810 708 aaKnown RBP12.01□□□□□ -0.49
TUBB-208ENST00000396389 HSPA4P34932 840 aa12.01□□□□□ -0.49
TUBB-208ENST00000396389 ANAPC15P60006 121 aa12.01□□□□□ -0.49
TUBB-208ENST00000396389 GTF2IP78347 998 aa12.01□□□□□ -0.49
TUBB-208ENST00000396389 GRIK5Q16478 980 aa12.01□□□□□ -0.49
TUBB-208ENST00000396389 ADCK5Q3MIX3 580 aa12.01□□□□□ -0.49
TUBB-208ENST00000396389 MTMR6Q9Y217 621 aa12.01□□□□□ -0.49
TUBB-208ENST00000396389 TGFB2P61812 414 aa12□□□□□ -0.49
TUBB-208ENST00000396389 GPR162Q16538 588 aa12□□□□□ -0.49
TUBB-208ENST00000396389 CCDC129Q6ZRS4 1044 aa12□□□□□ -0.49
TUBB-208ENST00000396389 FAM227BQ96M60 508 aa12□□□□□ -0.49
TUBB-208ENST00000396389 TCEANC2Q96MN5 208 aa12□□□□□ -0.49
TUBB-208ENST00000396389 PAG1Q9NWQ8 432 aa12□□□□□ -0.49
TUBB-208ENST00000396389 CD2APQ9Y5K6 639 aa12□□□□□ -0.49
TUBB-208ENST00000396389 SLX4Q8IY92 1834 aa12□□□□□ -0.49
TUBB-208ENST00000396389 SMTNL1A8MU46 457 aa12□□□□□ -0.49
TUBB-208ENST00000396389 YBX3P16989 372 aaKnown RBP eCLIP12□□□□□ -0.492e-37■■■□□ 14.6
TUBB-208ENST00000396389 UBE4AQ14139 1066 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms