RNA–Protein interactions for RNA: ENST00000396251.1

XIRP1-202, Transcript of xin actin binding repeat containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene XIRP1, Length 6,040 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIRP1-202ENST00000396251 ZSCAN16Q9H4T2 348 aaPredicted RBP13.7□□□□□ -0.22
XIRP1-202ENST00000396251 RTEL1Q9NZ71 1219 aa13.7□□□□□ -0.22
XIRP1-202ENST00000396251 MRVI1Q9Y6F6 885 aa13.7□□□□□ -0.22
XIRP1-202ENST00000396251 ARHGEF25Q86VW2 580 aa13.69□□□□□ -0.22
XIRP1-202ENST00000396251 CWC15Q9P013 229 aaKnown RBP13.69□□□□□ -0.22
XIRP1-202ENST00000396251 ARHGEF5Q12774 1597 aa13.69□□□□□ -0.22
XIRP1-202ENST00000396251 HARSP12081 509 aaKnown RBP13.69□□□□□ -0.22
XIRP1-202ENST00000396251 NMIQ13287 307 aaPredicted RBP13.69□□□□□ -0.22
XIRP1-202ENST00000396251 CERKLQ49MI3 558 aaPredicted RBP13.69□□□□□ -0.22
XIRP1-202ENST00000396251 MTERF4Q7Z6M4 381 aaKnown RBP13.69□□□□□ -0.22
XIRP1-202ENST00000396251 SPAG5Q96R06 1193 aa13.69□□□□□ -0.22
XIRP1-202ENST00000396251 ZNF804BA4D1E1 1349 aa13.69□□□□□ -0.22
XIRP1-202ENST00000396251 SPATA31A3Q5VYP0 1347 aa13.69□□□□□ -0.22
XIRP1-202ENST00000396251 FLOT1O75955 427 aa13.69□□□□□ -0.22
XIRP1-202ENST00000396251 MCTP2Q6DN12 878 aa13.69□□□□□ -0.22
XIRP1-202ENST00000396251 PALLDQ8WX93 1383 aa13.69□□□□□ -0.22
XIRP1-202ENST00000396251 TARBP1Q13395 1621 aaKnown RBP13.69□□□□□ -0.22
XIRP1-202ENST00000396251 CCDC169A6NNP5 214 aa13.69□□□□□ -0.22
XIRP1-202ENST00000396251 CFBP00751 764 aa13.69□□□□□ -0.22
XIRP1-202ENST00000396251 SSFA2P28290 1259 aa13.69□□□□□ -0.22
XIRP1-202ENST00000396251 PHACTR3Q96KR7 559 aa13.69□□□□□ -0.22
XIRP1-202ENST00000396251 ALS2CR12Q96Q35 445 aa13.69□□□□□ -0.22
XIRP1-202ENST00000396251 TRPC6Q9Y210 931 aa13.69□□□□□ -0.22
XIRP1-202ENST00000396251 MRPL11Q9Y3B7 192 aaKnown RBP13.69□□□□□ -0.22
XIRP1-202ENST00000396251 RTL1A6NKG5 1358 aa13.69□□□□□ -0.22
XIRP1-202ENST00000396251 TNNI3KQ59H18 835 aa13.69□□□□□ -0.22
XIRP1-202ENST00000396251 BMP2KLQ5H9B9 411 aa13.69□□□□□ -0.22
XIRP1-202ENST00000396251 NUP88Q99567 741 aaPredicted RBP13.69□□□□□ -0.22
XIRP1-202ENST00000396251 FPGT-TNNI3KV9GXZ4 949 aa13.69□□□□□ -0.22
XIRP1-202ENST00000396251 RAD17O75943 681 aa13.68□□□□□ -0.22
XIRP1-202ENST00000396251 PCCAP05165 728 aaPredicted RBP13.68□□□□□ -0.22
XIRP1-202ENST00000396251 TRPC3Q13507 836 aa13.68□□□□□ -0.22
XIRP1-202ENST00000396251 IBTKQ9P2D0 1353 aaPredicted RBP13.68□□□□□ -0.22
XIRP1-202ENST00000396251 ARHGEF35A5YM69 484 aa13.68□□□□□ -0.22
XIRP1-202ENST00000396251 CHMP2AO43633 222 aa13.68□□□□□ -0.22
XIRP1-202ENST00000396251 IFI16Q16666 785 aaKnown RBP13.68□□□□□ -0.22
XIRP1-202ENST00000396251 RRAGBQ5VZM2 374 aa13.68□□□□□ -0.22
XIRP1-202ENST00000396251 APPBP2Q92624 585 aa13.68□□□□□ -0.22
XIRP1-202ENST00000396251 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.68□□□□□ -0.22
XIRP1-202ENST00000396251 ALAS1P13196 640 aa13.68□□□□□ -0.22
XIRP1-202ENST00000396251 BCAMP50895 628 aa13.68□□□□□ -0.22
XIRP1-202ENST00000396251 TAX1BP1Q86VP1 789 aa13.68□□□□□ -0.22
XIRP1-202ENST00000396251 ZNF594Q96JF6 807 aaPredicted RBP13.68□□□□□ -0.22
XIRP1-202ENST00000396251 H0YHG0 523 aa13.67□□□□□ -0.22
XIRP1-202ENST00000396251 WDR44Q5JSH3 913 aa13.67□□□□□ -0.22
XIRP1-202ENST00000396251 GRPEL1Q9HAV7 217 aa13.67□□□□□ -0.22
XIRP1-202ENST00000396251 ASAP1Q9ULH1 1129 aa13.67□□□□□ -0.22
XIRP1-202ENST00000396251 MYO5CQ9NQX4 1742 aa13.67□□□□□ -0.22
XIRP1-202ENST00000396251 GCC2Q8IWJ2 1684 aa13.67□□□□□ -0.22
XIRP1-202ENST00000396251 MCM4P33991 863 aa13.67□□□□□ -0.22
XIRP1-202ENST00000396251 TIMM10P62072 90 aa13.67□□□□□ -0.22
XIRP1-202ENST00000396251 TSHZ3Q63HK5 1081 aa13.67□□□□□ -0.22
XIRP1-202ENST00000396251 TTLL7Q6ZT98 887 aa13.67□□□□□ -0.22
XIRP1-202ENST00000396251 RNF169Q8NCN4 708 aa13.67□□□□□ -0.22
XIRP1-202ENST00000396251 PANK2Q9BZ23 570 aa13.67□□□□□ -0.22
XIRP1-202ENST00000396251 HAUS2Q9NVX0 235 aa13.67□□□□□ -0.22
XIRP1-202ENST00000396251 RPL13P26373 211 aaKnown RBP13.67□□□□□ -0.22
XIRP1-202ENST00000396251 TMOD1P28289 359 aa13.67□□□□□ -0.22
XIRP1-202ENST00000396251 ADCY7P51828 1080 aa13.67□□□□□ -0.22
XIRP1-202ENST00000396251 USH1GQ495M9 461 aa13.67□□□□□ -0.22
XIRP1-202ENST00000396251 DTHD1Q6ZMT9 781 aa13.67□□□□□ -0.22
XIRP1-202ENST00000396251 RNF34Q969K3 372 aa13.67□□□□□ -0.22
XIRP1-202ENST00000396251 COA7Q96BR5 231 aa13.67□□□□□ -0.22
XIRP1-202ENST00000396251 ADD3Q9UEY8 706 aaKnown RBP13.67□□□□□ -0.22
XIRP1-202ENST00000396251 CLRN2A0PK11 232 aa13.67□□□□□ -0.22
XIRP1-202ENST00000396251 RPS6KA4O75676 772 aa13.67□□□□□ -0.22
XIRP1-202ENST00000396251 GJB2P29033 226 aa13.67□□□□□ -0.22
XIRP1-202ENST00000396251 OTUD6AQ7L8S5 288 aa13.67□□□□□ -0.22
XIRP1-202ENST00000396251 OVOS2A0A0G2JMS6 1433 aa13.67□□□□□ -0.22
XIRP1-202ENST00000396251 OVOS2A0A0J9YW53 1432 aa13.67□□□□□ -0.22
XIRP1-202ENST00000396251 OVOS2Q6IE36 1432 aa13.67□□□□□ -0.22
XIRP1-202ENST00000396251 PDE1AP54750 535 aa13.67□□□□□ -0.22
XIRP1-202ENST00000396251 BIRC3Q13489 604 aa13.67□□□□□ -0.22
XIRP1-202ENST00000396251 CCDC125Q86Z20 511 aa13.67□□□□□ -0.22
XIRP1-202ENST00000396251 CLIP2Q9UDT6 1046 aa13.67□□□□□ -0.22
XIRP1-202ENST00000396251 TMEM87BQ96K49 555 aa13.66□□□□□ -0.22
XIRP1-202ENST00000396251 MYO3BQ8WXR4 1341 aa13.66□□□□□ -0.22
XIRP1-202ENST00000396251 PSMA7O14818 248 aa13.66□□□□□ -0.22
XIRP1-202ENST00000396251 SEMA3EO15041 775 aa13.66□□□□□ -0.22
XIRP1-202ENST00000396251 C21orf2O43822 256 aa13.66□□□□□ -0.22
XIRP1-202ENST00000396251 CALRP27797 417 aaKnown RBP13.66□□□□□ -0.22
XIRP1-202ENST00000396251 USP17L3A6NCW0 530 aa13.66□□□□□ -0.22
XIRP1-202ENST00000396251 USP17L4A6NCW7 530 aa13.66□□□□□ -0.22
XIRP1-202ENST00000396251 MYCP01106 439 aaPredicted RBP13.66□□□□□ -0.22
XIRP1-202ENST00000396251 TNNT1P13805 278 aa13.66□□□□□ -0.22
XIRP1-202ENST00000396251 EIF4A1P60842 406 aaKnown RBP13.66□□□□□ -0.22
XIRP1-202ENST00000396251 Q6ZUG5 572 aa13.66□□□□□ -0.22
XIRP1-202ENST00000396251 USP17L1Q7RTZ2 530 aa13.66□□□□□ -0.22
XIRP1-202ENST00000396251 CCDC65Q8IXS2 484 aa13.66□□□□□ -0.22
XIRP1-202ENST00000396251 OTUD6BQ8N6M0 293 aa13.66□□□□□ -0.22
XIRP1-202ENST00000396251 DBNDD1Q9H9R9 158 aa13.66□□□□□ -0.22
XIRP1-202ENST00000396251 HECW2Q9P2P5 1572 aa13.66□□□□□ -0.22
XIRP1-202ENST00000396251 ICA1Q05084 483 aa13.66□□□□□ -0.22
XIRP1-202ENST00000396251 UBE4AQ14139 1066 aa13.66□□□□□ -0.22
XIRP1-202ENST00000396251 AXDND1Q5T1B0 1012 aaPredicted RBP13.66□□□□□ -0.22
XIRP1-202ENST00000396251 TXNRD1Q16881 649 aa13.66□□□□□ -0.22
XIRP1-202ENST00000396251 NOC2LQ9Y3T9 749 aaKnown RBP13.66□□□□□ -0.22
XIRP1-202ENST00000396251 VAMP4O75379 141 aa13.65□□□□□ -0.22
XIRP1-202ENST00000396251 ABCB5Q2M3G0 1257 aa13.65□□□□□ -0.22
XIRP1-202ENST00000396251 FMNL3Q8IVF7 1028 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms