RNA–Protein interactions for RNA: ENST00000396081.5

HERPUD2-202, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 3,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-202ENST00000396081 TXLNAP40222 546 aa20.87■□□□□ 0.93
HERPUD2-202ENST00000396081 LEKR1Q6ZMV7 388 aa20.87■□□□□ 0.93
HERPUD2-202ENST00000396081 VPS37DQ86XT2 251 aa20.87■□□□□ 0.93
HERPUD2-202ENST00000396081 OSBP2Q969R2 916 aa20.87■□□□□ 0.93
HERPUD2-202ENST00000396081 RFX7Q2KHR2 1363 aa20.87■□□□□ 0.93
HERPUD2-202ENST00000396081 TSPOAP1O95153 1857 aa20.86■□□□□ 0.93
HERPUD2-202ENST00000396081 CHMP4BP1P59074 171 aa20.86■□□□□ 0.93
HERPUD2-202ENST00000396081 ZNF790Q6PG37 636 aa20.86■□□□□ 0.93
HERPUD2-202ENST00000396081 NFE2L3Q9Y4A8 694 aa20.86■□□□□ 0.93
HERPUD2-202ENST00000396081 KCNA6P17658 529 aa20.86■□□□□ 0.93
HERPUD2-202ENST00000396081 METTL16Q86W50 562 aaKnown RBP20.86■□□□□ 0.93
HERPUD2-202ENST00000396081 FOXP4Q8IVH2 680 aaPredicted RBP20.86■□□□□ 0.93
HERPUD2-202ENST00000396081 HPS5Q9UPZ3 1129 aa20.86■□□□□ 0.93
HERPUD2-202ENST00000396081 PHACTR2O75167 634 aa20.86■□□□□ 0.93
HERPUD2-202ENST00000396081 WWC2Q6AWC2 1192 aa20.86■□□□□ 0.93
HERPUD2-202ENST00000396081 GOLGA5Q8TBA6 731 aa20.86■□□□□ 0.93
HERPUD2-202ENST00000396081 EXOC4Q96A65 974 aa20.86■□□□□ 0.93
HERPUD2-202ENST00000396081 MYH15Q9Y2K3 1946 aa20.86■□□□□ 0.93
HERPUD2-202ENST00000396081 JAKMIP3Q5VZ66 844 aa20.85■□□□□ 0.93
HERPUD2-202ENST00000396081 SPECC1LQ69YQ0 1117 aa20.85■□□□□ 0.93
HERPUD2-202ENST00000396081 TC2NQ8N9U0 490 aa20.85■□□□□ 0.93
HERPUD2-202ENST00000396081 DIP2AQ14689 1571 aa20.85■□□□□ 0.93
HERPUD2-202ENST00000396081 STX10O60499 249 aa20.85■□□□□ 0.93
HERPUD2-202ENST00000396081 PHKBQ93100 1093 aa20.85■□□□□ 0.93
HERPUD2-202ENST00000396081 ZNF594Q96JF6 807 aaPredicted RBP20.85■□□□□ 0.93
HERPUD2-202ENST00000396081 C19orf44Q9H6X5 657 aa20.85■□□□□ 0.93
HERPUD2-202ENST00000396081 MRPL44Q9H9J2 332 aaKnown RBP20.85■□□□□ 0.93
HERPUD2-202ENST00000396081 ABCC6O95255 1503 aa20.84■□□□□ 0.93
HERPUD2-202ENST00000396081 KIFC2Q96AC6 838 aa20.84■□□□□ 0.93
HERPUD2-202ENST00000396081 SUGCTQ9HAC7 445 aa20.84■□□□□ 0.93
HERPUD2-202ENST00000396081 KCNH3Q9ULD8 1083 aa20.84■□□□□ 0.93
HERPUD2-202ENST00000396081 RRP15Q9Y3B9 282 aaKnown RBP20.84■□□□□ 0.93
HERPUD2-202ENST00000396081 KDM3BQ7LBC6 1761 aa20.84■□□□□ 0.93
HERPUD2-202ENST00000396081 SLIT1O75093 1534 aa20.84■□□□□ 0.93
HERPUD2-202ENST00000396081 CCDC151A5D8V7 595 aa20.84■□□□□ 0.93
HERPUD2-202ENST00000396081 RHOXF2BP0C7M4 288 aa20.84■□□□□ 0.93
HERPUD2-202ENST00000396081 RHOXF2Q9BQY4 288 aa20.84■□□□□ 0.93
HERPUD2-202ENST00000396081 FGAP02671 866 aa20.84■□□□□ 0.93
HERPUD2-202ENST00000396081 KRT40Q6A162 431 aa20.84■□□□□ 0.93
HERPUD2-202ENST00000396081 ANKRD24Q8TF21 1146 aa20.84■□□□□ 0.93
HERPUD2-202ENST00000396081 MED1Q15648 1581 aaPredicted RBP20.83■□□□□ 0.93
HERPUD2-202ENST00000396081 SOWAHDA6NJG2 315 aa20.83■□□□□ 0.93
HERPUD2-202ENST00000396081 ACTN2P35609 894 aa20.83■□□□□ 0.93
HERPUD2-202ENST00000396081 ZNF496Q96IT1 587 aaPredicted RBP20.83■□□□□ 0.93
HERPUD2-202ENST00000396081 HEG1Q9ULI3 1381 aa20.83■□□□□ 0.92
HERPUD2-202ENST00000396081 N4BP1O75113 896 aaKnown RBP20.83■□□□□ 0.92
HERPUD2-202ENST00000396081 CCDC102AQ96A19 550 aa20.83■□□□□ 0.92
HERPUD2-202ENST00000396081 TBX22Q9Y458 520 aa20.83■□□□□ 0.92
HERPUD2-202ENST00000396081 BMP6P22004 513 aa20.82■□□□□ 0.92
HERPUD2-202ENST00000396081 SKIDA1Q1XH10 827 aa20.82■□□□□ 0.92
HERPUD2-202ENST00000396081 KIF4BQ2VIQ3 1234 aa20.82■□□□□ 0.92
HERPUD2-202ENST00000396081 LRRC24Q50LG9 513 aa20.82■□□□□ 0.92
HERPUD2-202ENST00000396081 NCOA7Q8NI08 942 aa20.82■□□□□ 0.92
HERPUD2-202ENST00000396081 PALLDQ8WX93 1383 aa20.82■□□□□ 0.92
HERPUD2-202ENST00000396081 A0A0U1RQJ8 604 aa20.82■□□□□ 0.92
HERPUD2-202ENST00000396081 TFRCP02786 760 aaKnown RBP20.82■□□□□ 0.92
HERPUD2-202ENST00000396081 CCDC175P0C221 793 aa20.82■□□□□ 0.92
HERPUD2-202ENST00000396081 ATP2B1P20020 1258 aa20.82■□□□□ 0.92
HERPUD2-202ENST00000396081 FMR1Q06787 632 aaKnown RBP eCLIP20.82■□□□□ 0.92
HERPUD2-202ENST00000396081 MICU3Q86XE3 530 aa20.82■□□□□ 0.92
HERPUD2-202ENST00000396081 ATRIPQ8WXE1 791 aa20.82■□□□□ 0.92
HERPUD2-202ENST00000396081 BRD3Q15059 726 aa20.81■□□□□ 0.92
HERPUD2-202ENST00000396081 SRLQ86TD4 932 aa20.81■□□□□ 0.92
HERPUD2-202ENST00000396081 SAMSN1Q9NSI8 373 aaKnown RBP20.81■□□□□ 0.92
HERPUD2-202ENST00000396081 HPSEQ9Y251 543 aa20.81■□□□□ 0.92
HERPUD2-202ENST00000396081 LAMA4Q16363 1823 aa20.81■□□□□ 0.92
HERPUD2-202ENST00000396081 RABL6Q3YEC7 729 aaPredicted RBP20.81■□□□□ 0.92
HERPUD2-202ENST00000396081 ESCO1Q5FWF5 840 aa20.81■□□□□ 0.92
HERPUD2-202ENST00000396081 ZNF569Q5MCW4 686 aa20.81■□□□□ 0.92
HERPUD2-202ENST00000396081 A0A1B0GUL7 405 aa20.81■□□□□ 0.92
HERPUD2-202ENST00000396081 ANTXR2P58335 489 aa20.81■□□□□ 0.92
HERPUD2-202ENST00000396081 TRIM29Q14134 588 aa20.81■□□□□ 0.92
HERPUD2-202ENST00000396081 SRGAP1Q7Z6B7 1085 aa20.81■□□□□ 0.92
HERPUD2-202ENST00000396081 GRAMD1CQ8IYS0 662 aa20.81■□□□□ 0.92
HERPUD2-202ENST00000396081 DENND2AQ9ULE3 1009 aa20.81■□□□□ 0.92
HERPUD2-202ENST00000396081 FAN1Q9Y2M0 1017 aa20.81■□□□□ 0.92
HERPUD2-202ENST00000396081 ANKRD65E5RJM6 399 aa20.8■□□□□ 0.92
HERPUD2-202ENST00000396081 ZNF213O14771 459 aa20.8■□□□□ 0.92
HERPUD2-202ENST00000396081 METAP2P50579 478 aaKnown RBP eCLIP20.8■□□□□ 0.92
HERPUD2-202ENST00000396081 KLHL10Q6JEL2 608 aa20.8■□□□□ 0.92
HERPUD2-202ENST00000396081 KIF5CO60282 957 aa20.8■□□□□ 0.92
HERPUD2-202ENST00000396081 TRDNQ13061 729 aa20.8■□□□□ 0.92
HERPUD2-202ENST00000396081 TBX2Q13207 712 aaPredicted RBP20.8■□□□□ 0.92
HERPUD2-202ENST00000396081 HDXQ7Z353 690 aa20.8■□□□□ 0.92
HERPUD2-202ENST00000396081 KCNH5Q8NCM2 988 aa20.8■□□□□ 0.92
HERPUD2-202ENST00000396081 RAI14Q9P0K7 980 aa20.8■□□□□ 0.92
HERPUD2-202ENST00000396081 CUTAO60888 179 aa20.79■□□□□ 0.92
HERPUD2-202ENST00000396081 RESP18Q5W5W9 173 aa20.79■□□□□ 0.92
HERPUD2-202ENST00000396081 FOXR1Q6PIV2 292 aa20.79■□□□□ 0.92
HERPUD2-202ENST00000396081 ATG9AQ7Z3C6 839 aa20.79■□□□□ 0.92
HERPUD2-202ENST00000396081 MB21D2Q8IYB1 491 aaPredicted RBP20.79■□□□□ 0.92
HERPUD2-202ENST00000396081 TTC5Q8N0Z6 440 aa20.79■□□□□ 0.92
HERPUD2-202ENST00000396081 PNKPQ96T60 521 aa20.79■□□□□ 0.92
HERPUD2-202ENST00000396081 ABCB6Q9NP58 842 aa20.79■□□□□ 0.92
HERPUD2-202ENST00000396081 MAN1B1Q9UKM7 699 aa20.79■□□□□ 0.92
HERPUD2-202ENST00000396081 PPP6R2O75170 966 aa20.79■□□□□ 0.92
HERPUD2-202ENST00000396081 ERLIN1O75477 346 aa20.79■□□□□ 0.92
HERPUD2-202ENST00000396081 EIF3JO75822 258 aaKnown RBP20.79■□□□□ 0.92
HERPUD2-202ENST00000396081 APPP05067 770 aa20.79■□□□□ 0.92
HERPUD2-202ENST00000396081 PTPAQ15257 358 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms