RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 PDCL3Q9H2J4 239 aa16.66■□□□□ 0.26
SREBF1-205ENST00000395757 CABP5Q9NP86 173 aa16.66■□□□□ 0.26
SREBF1-205ENST00000395757 ANKIB1Q9P2G1 1089 aa16.66■□□□□ 0.26
SREBF1-205ENST00000395757 CCDC144BQ3MJ40 725 aa16.65■□□□□ 0.26
SREBF1-205ENST00000395757 FAM47AQ5JRC9 791 aa16.65■□□□□ 0.26
SREBF1-205ENST00000395757 USPL1Q5W0Q7 1092 aa16.65■□□□□ 0.26
SREBF1-205ENST00000395757 KCNF1Q9H3M0 494 aa16.65■□□□□ 0.26
SREBF1-205ENST00000395757 ZSWIM5Q9P217 1185 aa16.65■□□□□ 0.26
SREBF1-205ENST00000395757 RGPD1P0DJD0 1748 aa16.65■□□□□ 0.26
SREBF1-205ENST00000395757 NALCNQ8IZF0 1738 aa16.65■□□□□ 0.26
SREBF1-205ENST00000395757 CDC27P30260 824 aa16.65■□□□□ 0.26
SREBF1-205ENST00000395757 NR5A1Q13285 461 aa16.65■□□□□ 0.26
SREBF1-205ENST00000395757 PLIN2Q99541 437 aa16.65■□□□□ 0.26
SREBF1-205ENST00000395757 UQCRFS1P1P0C7P4 283 aa16.65■□□□□ 0.26
SREBF1-205ENST00000395757 ADD2P35612 726 aa16.65■□□□□ 0.26
SREBF1-205ENST00000395757 NAA16Q6N069 864 aaPredicted RBP16.65■□□□□ 0.26
SREBF1-205ENST00000395757 LPIN2Q92539 896 aa16.65■□□□□ 0.26
SREBF1-205ENST00000395757 SLC4A9Q96Q91 983 aa16.65■□□□□ 0.26
SREBF1-205ENST00000395757 NEDD4P46934 1319 aa16.65■□□□□ 0.26
SREBF1-205ENST00000395757 TOPAZ1Q8N9V7 1692 aa16.65■□□□□ 0.26
SREBF1-205ENST00000395757 CYP19A1P11511 503 aaPredicted RBP16.64■□□□□ 0.25
SREBF1-205ENST00000395757 CAVIN4Q5BKX8 364 aa16.64■□□□□ 0.25
SREBF1-205ENST00000395757 ANKRD18AQ8IVF6 992 aa16.64■□□□□ 0.25
SREBF1-205ENST00000395757 LLPHQ9BRT6 129 aaKnown RBP16.64■□□□□ 0.25
SREBF1-205ENST00000395757 CCDC87Q9NVE4 849 aa16.64■□□□□ 0.25
SREBF1-205ENST00000395757 GNL3LQ9NVN8 582 aaKnown RBP16.64■□□□□ 0.25
SREBF1-205ENST00000395757 AATFQ9NY61 560 aaKnown RBP eCLIP16.64■□□□□ 0.25
SREBF1-205ENST00000395757 VPS54Q9P1Q0 977 aa16.64■□□□□ 0.25
SREBF1-205ENST00000395757 LOC102724428A0A0B4J2F2 783 aa16.64■□□□□ 0.25
SREBF1-205ENST00000395757 PFKFB1P16118 471 aa16.64■□□□□ 0.25
SREBF1-205ENST00000395757 SIK1P57059 783 aa16.64■□□□□ 0.25
SREBF1-205ENST00000395757 PTPN14Q15678 1187 aa16.64■□□□□ 0.25
SREBF1-205ENST00000395757 JMYQ8N9B5 988 aa16.64■□□□□ 0.25
SREBF1-205ENST00000395757 NKX2-3Q8TAU0 364 aa16.64■□□□□ 0.25
SREBF1-205ENST00000395757 ZNF274Q96GC6 653 aaPredicted RBP16.64■□□□□ 0.25
SREBF1-205ENST00000395757 GPR101Q96P66 508 aaPredicted RBP16.64■□□□□ 0.25
SREBF1-205ENST00000395757 UIMC1Q96RL1 719 aa16.64■□□□□ 0.25
SREBF1-205ENST00000395757 VAT1LQ9HCJ6 419 aa16.64■□□□□ 0.25
SREBF1-205ENST00000395757 ANTXR2P58335 489 aa16.64■□□□□ 0.25
SREBF1-205ENST00000395757 EXOSC10Q01780 885 aaKnown RBP16.64■□□□□ 0.25
SREBF1-205ENST00000395757 ATP2B2Q01814 1243 aa16.64■□□□□ 0.25
SREBF1-205ENST00000395757 APOA5Q6Q788 366 aa16.64■□□□□ 0.25
SREBF1-205ENST00000395757 DIS3L2Q8IYB7 885 aaKnown RBP16.64■□□□□ 0.25
SREBF1-205ENST00000395757 SFPQP23246 707 aaKnown RBP eCLIP16.63■□□□□ 0.25
SREBF1-205ENST00000395757 PPP4R3BQ5MIZ7 849 aa16.63■□□□□ 0.25
SREBF1-205ENST00000395757 NBPF5PQ86XG9 351 aaPredicted RBP16.63■□□□□ 0.25
SREBF1-205ENST00000395757 KCNG4Q8TDN1 519 aa16.63■□□□□ 0.25
SREBF1-205ENST00000395757 RIPOR2Q9Y4F9 1068 aa16.63■□□□□ 0.25
SREBF1-205ENST00000395757 CHRNDQ07001 517 aa16.63■□□□□ 0.25
SREBF1-205ENST00000395757 DHX58Q96C10 678 aa16.63■□□□□ 0.25
SREBF1-205ENST00000395757 FAM208AQ9UK61 1670 aaKnown RBP16.63■□□□□ 0.25
SREBF1-205ENST00000395757 SRP68Q9UHB9 627 aaKnown RBP16.63■□□□□ 0.25
SREBF1-205ENST00000395757 PATL2C9JE40 543 aaKnown RBP16.62■□□□□ 0.25
SREBF1-205ENST00000395757 CIAO1O76071 339 aa16.62■□□□□ 0.25
SREBF1-205ENST00000395757 GUCY1A2P33402 732 aa16.62■□□□□ 0.25
SREBF1-205ENST00000395757 GPIHBP1Q8IV16 184 aa16.62■□□□□ 0.25
SREBF1-205ENST00000395757 MAPK8IP1Q9UQF2 711 aa16.62■□□□□ 0.25
SREBF1-205ENST00000395757 V9GY48 417 aaPredicted RBP16.62■□□□□ 0.25
SREBF1-205ENST00000395757 CASP1P29466 404 aa16.62■□□□□ 0.25
SREBF1-205ENST00000395757 PDCL2Q8N4E4 241 aa16.62■□□□□ 0.25
SREBF1-205ENST00000395757 EEF2KMTQ96G04 330 aa16.62■□□□□ 0.25
SREBF1-205ENST00000395757 XPO4Q9C0E2 1151 aaKnown RBP16.62■□□□□ 0.25
SREBF1-205ENST00000395757 RCOR1Q9UKL0 485 aa16.62■□□□□ 0.25
SREBF1-205ENST00000395757 MAGEB6P1A0A0J9YX57 407 aa16.61■□□□□ 0.25
SREBF1-205ENST00000395757 CTAGE5O15320 804 aa16.61■□□□□ 0.25
SREBF1-205ENST00000395757 ATP1A3P13637 1013 aa16.61■□□□□ 0.25
SREBF1-205ENST00000395757 KCNB2Q92953 911 aa16.61■□□□□ 0.25
SREBF1-205ENST00000395757 ZSWIM4Q9H7M6 989 aa16.61■□□□□ 0.25
SREBF1-205ENST00000395757 ZNF219Q9P2Y4 722 aaPredicted RBP16.61■□□□□ 0.25
SREBF1-205ENST00000395757 F8W031 263 aaPredicted RBP16.61■□□□□ 0.25
SREBF1-205ENST00000395757 POLR2DO15514 142 aaKnown RBP16.61■□□□□ 0.25
SREBF1-205ENST00000395757 ZPR1O75312 459 aa16.61■□□□□ 0.25
SREBF1-205ENST00000395757 STX8Q9UNK0 236 aa16.61■□□□□ 0.25
SREBF1-205ENST00000395757 XRN1Q8IZH2 1706 aaKnown RBP16.61■□□□□ 0.25
SREBF1-205ENST00000395757 TPM3P06753 285 aa16.61■□□□□ 0.25
SREBF1-205ENST00000395757 ZNF174Q15697 407 aa16.61■□□□□ 0.25
SREBF1-205ENST00000395757 LINC00301Q8NCQ3 95 aa16.61■□□□□ 0.25
SREBF1-205ENST00000395757 ELP1O95163 1332 aa16.61■□□□□ 0.25
SREBF1-205ENST00000395757 UBN2Q6ZU65 1347 aa16.61■□□□□ 0.25
SREBF1-205ENST00000395757 TSPY2A6NKD2 308 aa16.6■□□□□ 0.25
SREBF1-205ENST00000395757 GNPATO15228 680 aa16.6■□□□□ 0.25
SREBF1-205ENST00000395757 FOXN1O15353 648 aa16.6■□□□□ 0.25
SREBF1-205ENST00000395757 DZIP1Q86YF9 867 aaKnown RBP16.6■□□□□ 0.25
SREBF1-205ENST00000395757 CERS3Q8IU89 383 aa16.6■□□□□ 0.25
SREBF1-205ENST00000395757 CDC5LQ99459 802 aaKnown RBP16.6■□□□□ 0.25
SREBF1-205ENST00000395757 GPR108Q9NPR9 543 aa16.6■□□□□ 0.25
SREBF1-205ENST00000395757 USP5P45974 858 aa16.6■□□□□ 0.25
SREBF1-205ENST00000395757 UBASH3AP57075 661 aa16.6■□□□□ 0.25
SREBF1-205ENST00000395757 ERFEQ4G0M1 354 aa16.6■□□□□ 0.25
SREBF1-205ENST00000395757 USP27XA6NNY8 438 aa16.6■□□□□ 0.25
SREBF1-205ENST00000395757 IFIT1BQ5T764 474 aaKnown RBP16.6■□□□□ 0.25
SREBF1-205ENST00000395757 MB21D2Q8IYB1 491 aaPredicted RBP16.6■□□□□ 0.25
SREBF1-205ENST00000395757 SMARCC2Q8TAQ2 1214 aa16.6■□□□□ 0.25
SREBF1-205ENST00000395757 KIAA1524Q8TCG1 905 aa16.6■□□□□ 0.25
SREBF1-205ENST00000395757 KIF23Q02241 960 aaPredicted RBP16.59■□□□□ 0.25
SREBF1-205ENST00000395757 CEP135Q66GS9 1140 aa16.59■□□□□ 0.25
SREBF1-205ENST00000395757 STRBPQ96SI9 672 aaKnown RBP16.59■□□□□ 0.25
SREBF1-205ENST00000395757 USP17L12C9JPN9 530 aa16.59■□□□□ 0.25
SREBF1-205ENST00000395757 USP17L21D6R901 530 aa16.59■□□□□ 0.25
SREBF1-205ENST00000395757 TSGA10IPQ3SY00 556 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms