RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 NECAB1Q8N987 351 aa20.69■□□□□ 0.9
MBD4-202ENST00000393278 RTFDC1Q9BY42 306 aaPredicted RBP20.69■□□□□ 0.9
MBD4-202ENST00000393278 SNED1Q8TER0 1413 aa20.68■□□□□ 0.9
MBD4-202ENST00000393278 PRC1O43663 620 aa20.68■□□□□ 0.9
MBD4-202ENST00000393278 MFSD14BQ5SR56 506 aa20.68■□□□□ 0.9
MBD4-202ENST00000393278 CC2D2BQ6DHV5 1058 aa20.68■□□□□ 0.9
MBD4-202ENST00000393278 CHST3Q7LGC8 479 aa20.68■□□□□ 0.9
MBD4-202ENST00000393278 CRNKL1Q9BZJ0 848 aaKnown RBP20.68■□□□□ 0.9
MBD4-202ENST00000393278 CHD4Q14839 1912 aa20.68■□□□□ 0.9
MBD4-202ENST00000393278 LDHCP07864 332 aa20.67■□□□□ 0.9
MBD4-202ENST00000393278 ANTXR2P58335 489 aa20.67■□□□□ 0.9
MBD4-202ENST00000393278 GTF2IP78347 998 aa20.67■□□□□ 0.9
MBD4-202ENST00000393278 CTDSPL2Q05D32 466 aa20.67■□□□□ 0.9
MBD4-202ENST00000393278 AKNAD1Q5T1N1 836 aa20.67■□□□□ 0.9
MBD4-202ENST00000393278 STAG1Q8WVM7 1258 aa20.67■□□□□ 0.9
MBD4-202ENST00000393278 SMC3Q9UQE7 1217 aa20.67■□□□□ 0.9
MBD4-202ENST00000393278 KIF13BQ9NQT8 1826 aa20.67■□□□□ 0.9
MBD4-202ENST00000393278 NEDD4P46934 1319 aa20.67■□□□□ 0.9
MBD4-202ENST00000393278 ANAPC4Q9UJX5 808 aa20.67■□□□□ 0.9
MBD4-202ENST00000393278 MROH7-TTC4A0A0A0MT08 1334 aa20.66■□□□□ 0.9
MBD4-202ENST00000393278 ZBTB7AO95365 584 aa20.66■□□□□ 0.9
MBD4-202ENST00000393278 PPARAQ07869 468 aa20.66■□□□□ 0.9
MBD4-202ENST00000393278 DIXDC1Q155Q3 683 aa20.66■□□□□ 0.9
MBD4-202ENST00000393278 DOK7Q18PE1 504 aa20.66■□□□□ 0.9
MBD4-202ENST00000393278 GTF3C6Q969F1 213 aa20.66■□□□□ 0.9
MBD4-202ENST00000393278 CNNM2Q9H8M5 875 aa20.66■□□□□ 0.9
MBD4-202ENST00000393278 ATP8A2Q9NTI2 1148 aa20.66■□□□□ 0.9
MBD4-202ENST00000393278 ZNF219Q9P2Y4 722 aaPredicted RBP20.66■□□□□ 0.9
MBD4-202ENST00000393278 ZDHHC9Q9Y397 364 aa20.66■□□□□ 0.9
MBD4-202ENST00000393278 TACC3Q9Y6A5 838 aa20.66■□□□□ 0.9
MBD4-202ENST00000393278 EVCP57679 992 aa20.65■□□□□ 0.9
MBD4-202ENST00000393278 PPP4CP60510 307 aa20.65■□□□□ 0.9
MBD4-202ENST00000393278 APOBRQ0VD83 1088 aa20.65■□□□□ 0.9
MBD4-202ENST00000393278 TTLL6Q8N841 843 aa20.65■□□□□ 0.9
MBD4-202ENST00000393278 MTFR1LQ9H019 292 aa20.65■□□□□ 0.9
MBD4-202ENST00000393278 SUGT1Q9Y2Z0 365 aa20.65■□□□□ 0.9
MBD4-202ENST00000393278 B4E1Z4 1266 aa20.64■□□□□ 0.9
MBD4-202ENST00000393278 BAG3O95817 575 aa20.64■□□□□ 0.9
MBD4-202ENST00000393278 MCM4P33991 863 aa20.64■□□□□ 0.9
MBD4-202ENST00000393278 STK3Q13188 491 aa20.64■□□□□ 0.9
MBD4-202ENST00000393278 CLEC17AQ6ZS10 378 aa20.64■□□□□ 0.9
MBD4-202ENST00000393278 MFSD6Q6ZSS7 791 aa20.64■□□□□ 0.9
MBD4-202ENST00000393278 CYB5R4Q7L1T6 521 aa20.64■□□□□ 0.9
MBD4-202ENST00000393278 CERS3Q8IU89 383 aa20.64■□□□□ 0.9
MBD4-202ENST00000393278 FAM163AQ96GL9 167 aaPredicted RBP20.64■□□□□ 0.9
MBD4-202ENST00000393278 KRT23Q9C075 422 aa20.64■□□□□ 0.9
MBD4-202ENST00000393278 RNF41Q9H4P4 317 aaPredicted RBP20.64■□□□□ 0.9
MBD4-202ENST00000393278 DCP1AQ9NPI6 582 aaPredicted RBP20.64■□□□□ 0.9
MBD4-202ENST00000393278 G3V3G9 751 aa20.64■□□□□ 0.89
MBD4-202ENST00000393278 PFKFB2O60825 505 aa20.64■□□□□ 0.89
MBD4-202ENST00000393278 BRD1O95696 1058 aa20.64■□□□□ 0.89
MBD4-202ENST00000393278 KCNA3P22001 575 aa20.64■□□□□ 0.89
MBD4-202ENST00000393278 DCAF8Q5TAQ9 597 aa20.64■□□□□ 0.89
MBD4-202ENST00000393278 PODNQ7Z5L7 613 aa20.64■□□□□ 0.89
MBD4-202ENST00000393278 SLF2Q8IX21 1173 aa20.64■□□□□ 0.89
MBD4-202ENST00000393278 NKX2-3Q8TAU0 364 aa20.64■□□□□ 0.89
MBD4-202ENST00000393278 ZNF274Q96GC6 653 aaPredicted RBP20.64■□□□□ 0.89
MBD4-202ENST00000393278 GBP4Q96PP9 640 aa20.64■□□□□ 0.89
MBD4-202ENST00000393278 NOL10Q9BSC4 688 aaKnown RBP20.64■□□□□ 0.89
MBD4-202ENST00000393278 INCENPQ9NQS7 918 aa20.64■□□□□ 0.89
MBD4-202ENST00000393278 MYH2Q9UKX2 1941 aa20.64■□□□□ 0.89
MBD4-202ENST00000393278 MINDY4BA8MYZ0 360 aa20.63■□□□□ 0.89
MBD4-202ENST00000393278 DPEP1P16444 411 aa20.63■□□□□ 0.89
MBD4-202ENST00000393278 GJB2P29033 226 aa20.63■□□□□ 0.89
MBD4-202ENST00000393278 GRIPAP1Q4V328 841 aa20.63■□□□□ 0.89
MBD4-202ENST00000393278 CTR9Q6PD62 1173 aa20.63■□□□□ 0.89
MBD4-202ENST00000393278 GPHNQ9NQX3 736 aaPredicted RBP20.63■□□□□ 0.89
MBD4-202ENST00000393278 BAZ2AQ9UIF9 1905 aaKnown RBP20.63■□□□□ 0.89
MBD4-202ENST00000393278 GPR75-ASB3A0A0A6YYF3 556 aa20.62■□□□□ 0.89
MBD4-202ENST00000393278 C21orf2O43822 256 aa20.62■□□□□ 0.89
MBD4-202ENST00000393278 POLD1P28340 1107 aa20.62■□□□□ 0.89
MBD4-202ENST00000393278 SUPT20HQ8NEM7 779 aa20.62■□□□□ 0.89
MBD4-202ENST00000393278 UPF1Q92900 1129 aaKnown RBP eCLIP20.62■□□□□ 0.89
MBD4-202ENST00000393278 GAKO14976 1311 aa20.62■□□□□ 0.89
MBD4-202ENST00000393278 PDIA3P30101 505 aaKnown RBP20.61■□□□□ 0.89
MBD4-202ENST00000393278 SCRN1Q12765 414 aa20.61■□□□□ 0.89
MBD4-202ENST00000393278 CERS5Q8N5B7 392 aa20.61■□□□□ 0.89
MBD4-202ENST00000393278 SH3RF3Q8TEJ3 882 aaPredicted RBP20.61■□□□□ 0.89
MBD4-202ENST00000393278 FBXW7Q969H0 707 aa20.61■□□□□ 0.89
MBD4-202ENST00000393278 TMEM87BQ96K49 555 aa20.61■□□□□ 0.89
MBD4-202ENST00000393278 DBNDD1Q9H9R9 158 aa20.61■□□□□ 0.89
MBD4-202ENST00000393278 ATF5Q9Y2D1 282 aaPredicted RBP20.61■□□□□ 0.89
MBD4-202ENST00000393278 USP17L12C9JPN9 530 aa20.61■□□□□ 0.89
MBD4-202ENST00000393278 USP17L21D6R901 530 aa20.61■□□□□ 0.89
MBD4-202ENST00000393278 SH2B2O14492 632 aaPredicted RBP20.61■□□□□ 0.89
MBD4-202ENST00000393278 BTDP43251 543 aa20.61■□□□□ 0.89
MBD4-202ENST00000393278 R3HDM1Q15032 1099 aaKnown RBP20.61■□□□□ 0.89
MBD4-202ENST00000393278 SBK1Q52WX2 424 aa20.61■□□□□ 0.89
MBD4-202ENST00000393278 CCDC93Q567U6 631 aa20.61■□□□□ 0.89
MBD4-202ENST00000393278 ZSWIM5Q9P217 1185 aa20.61■□□□□ 0.89
MBD4-202ENST00000393278 ARPP21Q9UBL0 812 aaPredicted RBP20.61■□□□□ 0.89
MBD4-202ENST00000393278 MKRN1Q9UHC7 482 aaKnown RBP20.61■□□□□ 0.89
MBD4-202ENST00000393278 ANGEL1Q9UNK9 670 aaKnown RBP20.61■□□□□ 0.89
MBD4-202ENST00000393278 LAMB1P07942 1786 aa20.6■□□□□ 0.89
MBD4-202ENST00000393278 KDM4AO75164 1064 aa20.6■□□□□ 0.89
MBD4-202ENST00000393278 PCP11498 1178 aaKnown RBP20.6■□□□□ 0.89
MBD4-202ENST00000393278 TGFB2P61812 414 aa20.6■□□□□ 0.89
MBD4-202ENST00000393278 KIAA2012Q0VF49 1180 aa20.6■□□□□ 0.89
MBD4-202ENST00000393278 WDR33Q9C0J8 1336 aaKnown RBP20.6■□□□□ 0.89
MBD4-202ENST00000393278 CYP2D7A0A087X1C5 515 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms