RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 DDX11L8A8MPP1 907 aa17.67■□□□□ 0.42
MKS1-202ENST00000393119 KDM4AO75164 1064 aa17.67■□□□□ 0.42
MKS1-202ENST00000393119 HMGB1P09429 215 aaKnown RBP17.67■□□□□ 0.42
MKS1-202ENST00000393119 CDC37L1Q7L3B6 337 aa17.67■□□□□ 0.42
MKS1-202ENST00000393119 TDRD7Q8NHU6 1098 aaKnown RBP17.67■□□□□ 0.42
MKS1-202ENST00000393119 CD209Q9NNX6 404 aa17.67■□□□□ 0.42
MKS1-202ENST00000393119 CACNA1SQ13698 1873 aa17.67■□□□□ 0.42
MKS1-202ENST00000393119 BBOX1O75936 387 aa17.67■□□□□ 0.42
MKS1-202ENST00000393119 RALYLQ86SE5 291 aaKnown RBP17.67■□□□□ 0.42
MKS1-202ENST00000393119 MYL10Q9BUA6 226 aa17.67■□□□□ 0.42
MKS1-202ENST00000393119 MXD3Q9BW11 206 aa17.67■□□□□ 0.42
MKS1-202ENST00000393119 AGXT2Q9BYV1 514 aa17.67■□□□□ 0.42
MKS1-202ENST00000393119 TOMM22Q9NS69 142 aa17.67■□□□□ 0.42
MKS1-202ENST00000393119 ZSCAN22P10073 491 aaPredicted RBP17.66■□□□□ 0.42
MKS1-202ENST00000393119 LARP1BQ659C4 914 aaKnown RBP17.66■□□□□ 0.42
MKS1-202ENST00000393119 CCDC144CPQ8IYA2 1237 aa17.66■□□□□ 0.42
MKS1-202ENST00000393119 CRAMP1Q96RY5 1269 aa17.66■□□□□ 0.42
MKS1-202ENST00000393119 ANKRD31Q8N7Z5 1873 aa17.66■□□□□ 0.42
MKS1-202ENST00000393119 PRDM1O75626 825 aa17.66■□□□□ 0.42
MKS1-202ENST00000393119 MCM5P33992 734 aa17.66■□□□□ 0.42
MKS1-202ENST00000393119 ZSWIM5Q9P217 1185 aa17.66■□□□□ 0.42
MKS1-202ENST00000393119 KLF18A0A0U1RQI7 1052 aa17.65■□□□□ 0.42
MKS1-202ENST00000393119 PFKFB2O60825 505 aa17.65■□□□□ 0.42
MKS1-202ENST00000393119 CYP2D6P10635 497 aa17.65■□□□□ 0.42
MKS1-202ENST00000393119 NCLP19338 710 aaKnown RBP17.65■□□□□ 0.42
MKS1-202ENST00000393119 DOK7Q18PE1 504 aa17.65■□□□□ 0.42
MKS1-202ENST00000393119 CNPY2Q9Y2B0 182 aa17.65■□□□□ 0.42
MKS1-202ENST00000393119 WDR33Q9C0J8 1336 aaKnown RBP17.65■□□□□ 0.42
MKS1-202ENST00000393119 HPS5Q9UPZ3 1129 aa17.65■□□□□ 0.42
MKS1-202ENST00000393119 GADD45BO75293 160 aaPredicted RBP17.64■□□□□ 0.41
MKS1-202ENST00000393119 ALX1Q15699 326 aa17.64■□□□□ 0.41
MKS1-202ENST00000393119 KCNQ5Q9NR82 932 aa17.64■□□□□ 0.41
MKS1-202ENST00000393119 SEMA3EO15041 775 aa17.64■□□□□ 0.41
MKS1-202ENST00000393119 F13A1P00488 732 aa17.64■□□□□ 0.41
MKS1-202ENST00000393119 XRCC6P12956 609 aaKnown RBP eCLIP17.64■□□□□ 0.41
MKS1-202ENST00000393119 ATP2B4P23634 1241 aa17.64■□□□□ 0.41
MKS1-202ENST00000393119 CLCN1P35523 988 aa17.64■□□□□ 0.41
MKS1-202ENST00000393119 ZNF804AQ7Z570 1209 aa17.64■□□□□ 0.41
MKS1-202ENST00000393119 DZIP1Q86YF9 867 aaKnown RBP17.64■□□□□ 0.41
MKS1-202ENST00000393119 NSUN7Q8NE18 718 aaKnown RBP17.64■□□□□ 0.41
MKS1-202ENST00000393119 GPT2Q8TD30 523 aa17.64■□□□□ 0.41
MKS1-202ENST00000393119 FBXW7Q969H0 707 aa17.64■□□□□ 0.41
MKS1-202ENST00000393119 GJB4Q9NTQ9 266 aa17.64■□□□□ 0.41
MKS1-202ENST00000393119 RBM27Q9P2N5 1060 aaKnown RBP17.64■□□□□ 0.41
MKS1-202ENST00000393119 ATP6V0A2Q9Y487 856 aa17.64■□□□□ 0.41
MKS1-202ENST00000393119 GUCY1B3Q02153 619 aa17.63■□□□□ 0.41
MKS1-202ENST00000393119 PPARAQ07869 468 aa17.63■□□□□ 0.41
MKS1-202ENST00000393119 TRDNQ13061 729 aa17.63■□□□□ 0.41
MKS1-202ENST00000393119 C2CD5Q86YS7 1000 aa17.63■□□□□ 0.41
MKS1-202ENST00000393119 UBE2Q2LH0YL09 131 aa17.62■□□□□ 0.41
MKS1-202ENST00000393119 DNM1Q05193 864 aaKnown RBP17.62■□□□□ 0.41
MKS1-202ENST00000393119 AKNAD1Q5T1N1 836 aa17.62■□□□□ 0.41
MKS1-202ENST00000393119 SP8Q8IXZ3 490 aa17.62■□□□□ 0.41
MKS1-202ENST00000393119 FLAD1Q8NFF5 587 aa17.62■□□□□ 0.41
MKS1-202ENST00000393119 STK32BQ9NY57 414 aa17.62■□□□□ 0.41
MKS1-202ENST00000393119 DDX49Q9Y6V7 483 aaKnown RBP17.62■□□□□ 0.41
MKS1-202ENST00000393119 PTPDC1A2A3K4 754 aa17.62■□□□□ 0.41
MKS1-202ENST00000393119 USP17L12C9JPN9 530 aa17.62■□□□□ 0.41
MKS1-202ENST00000393119 USP17L21D6R901 530 aa17.62■□□□□ 0.41
MKS1-202ENST00000393119 F8W031 263 aaPredicted RBP17.62■□□□□ 0.41
MKS1-202ENST00000393119 LDHBP07195 334 aaKnown RBP17.62■□□□□ 0.41
MKS1-202ENST00000393119 NPR1P16066 1061 aa17.62■□□□□ 0.41
MKS1-202ENST00000393119 OTUD7BQ6GQQ9 843 aa17.62■□□□□ 0.41
MKS1-202ENST00000393119 MYH13Q9UKX3 1938 aa17.62■□□□□ 0.41
MKS1-202ENST00000393119 GOLGA8BA8MQT2 603 aa17.61■□□□□ 0.41
MKS1-202ENST00000393119 GTF2IP78347 998 aa17.61■□□□□ 0.41
MKS1-202ENST00000393119 CTR9Q6PD62 1173 aa17.61■□□□□ 0.41
MKS1-202ENST00000393119 MFSD6Q6ZSS7 791 aa17.61■□□□□ 0.41
MKS1-202ENST00000393119 IGDCC4Q8TDY8 1250 aa17.61■□□□□ 0.41
MKS1-202ENST00000393119 SH3RF3Q8TEJ3 882 aaPredicted RBP17.61■□□□□ 0.41
MKS1-202ENST00000393119 NACAP1Q9BZK3 213 aa17.61■□□□□ 0.41
MKS1-202ENST00000393119 PODXL2Q9NZ53 605 aa17.61■□□□□ 0.41
MKS1-202ENST00000393119 FDPSP14324 419 aaKnown RBP17.61■□□□□ 0.41
MKS1-202ENST00000393119 ADD1P35611 737 aaKnown RBP17.61■□□□□ 0.41
MKS1-202ENST00000393119 USP48Q86UV5 1035 aa17.61■□□□□ 0.41
MKS1-202ENST00000393119 SH2B2O14492 632 aaPredicted RBP17.6■□□□□ 0.41
MKS1-202ENST00000393119 USP17L8P0C7I0 530 aa17.6■□□□□ 0.41
MKS1-202ENST00000393119 GNAT2P19087 354 aa17.6■□□□□ 0.41
MKS1-202ENST00000393119 PDE6BP35913 854 aa17.6■□□□□ 0.41
MKS1-202ENST00000393119 MPNDQ8N594 471 aa17.6■□□□□ 0.41
MKS1-202ENST00000393119 MICU3Q86XE3 530 aa17.6■□□□□ 0.41
MKS1-202ENST00000393119 ZNF274Q96GC6 653 aaPredicted RBP17.6■□□□□ 0.41
MKS1-202ENST00000393119 MASTLQ96GX5 879 aa17.6■□□□□ 0.41
MKS1-202ENST00000393119 LY9Q9HBG7 655 aa17.6■□□□□ 0.41
MKS1-202ENST00000393119 DCP1AQ9NPI6 582 aaPredicted RBP17.6■□□□□ 0.41
MKS1-202ENST00000393119 GOLGA6L22H0YM25 854 aa17.59■□□□□ 0.41
MKS1-202ENST00000393119 FIBPO43427 364 aa17.59■□□□□ 0.41
MKS1-202ENST00000393119 IL1R1P14778 569 aa17.59■□□□□ 0.41
MKS1-202ENST00000393119 CDC27P30260 824 aa17.59■□□□□ 0.41
MKS1-202ENST00000393119 MFSD14BQ5SR56 506 aa17.59■□□□□ 0.41
MKS1-202ENST00000393119 SMARCC2Q8TAQ2 1214 aa17.59■□□□□ 0.41
MKS1-202ENST00000393119 COL11A2P13942 1736 aaPredicted RBP17.59■□□□□ 0.41
MKS1-202ENST00000393119 IFIT3O14879 490 aaKnown RBP17.59■□□□□ 0.41
MKS1-202ENST00000393119 TMEM67Q5HYA8 995 aa17.59■□□□□ 0.41
MKS1-202ENST00000393119 DPP8Q6V1X1 898 aaPredicted RBP17.59■□□□□ 0.41
MKS1-202ENST00000393119 CMTR1Q8N1G2 835 aaKnown RBP17.59■□□□□ 0.41
MKS1-202ENST00000393119 WDR66Q8TBY9 1149 aa17.59■□□□□ 0.41
MKS1-202ENST00000393119 AIFM3Q96NN9 605 aa17.59■□□□□ 0.41
MKS1-202ENST00000393119 DBNDD1Q9H9R9 158 aa17.59■□□□□ 0.41
MKS1-202ENST00000393119 ANGEL1Q9UNK9 670 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms