RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 ERCC6LQ2NKX8 1250 aa9.93□□□□□ -0.82
PCDH9-202ENST00000377865 WWC2Q6AWC2 1192 aa9.93□□□□□ -0.82
PCDH9-202ENST00000377865 GPATCH11Q8N954 259 aa9.93□□□□□ -0.82
PCDH9-202ENST00000377865 TRIML1Q8N9V2 468 aa9.93□□□□□ -0.82
PCDH9-202ENST00000377865 STRN4Q9NRL3 753 aa9.93□□□□□ -0.82
PCDH9-202ENST00000377865 ANGEL1Q9UNK9 670 aaKnown RBP9.93□□□□□ -0.82
PCDH9-202ENST00000377865 PPP2R2CQ9Y2T4 447 aa9.93□□□□□ -0.82
PCDH9-202ENST00000377865 CALML3P27482 149 aa9.93□□□□□ -0.82
PCDH9-202ENST00000377865 MYSM1Q5VVJ2 828 aa9.93□□□□□ -0.82
PCDH9-202ENST00000377865 KRT28Q7Z3Y7 464 aa9.93□□□□□ -0.82
PCDH9-202ENST00000377865 ARFGAP2Q8N6H7 521 aa9.93□□□□□ -0.82
PCDH9-202ENST00000377865 APPBP2Q92624 585 aa9.93□□□□□ -0.82
PCDH9-202ENST00000377865 JARID2Q92833 1246 aaPredicted RBP9.93□□□□□ -0.82
PCDH9-202ENST00000377865 TAOK3Q9H2K8 898 aa9.93□□□□□ -0.82
PCDH9-202ENST00000377865 KAT14Q9H8E8 782 aa9.93□□□□□ -0.82
PCDH9-202ENST00000377865 SSBP05455 408 aaKnown RBP eCLIP9.93□□□□□ -0.82
PCDH9-202ENST00000377865 NF2P35240 595 aa9.93□□□□□ -0.82
PCDH9-202ENST00000377865 ENOX2Q16206 610 aaKnown RBP9.93□□□□□ -0.82
PCDH9-202ENST00000377865 CCDC40Q4G0X9 1142 aa9.93□□□□□ -0.82
PCDH9-202ENST00000377865 TAX1BP1Q86VP1 789 aa9.93□□□□□ -0.82
PCDH9-202ENST00000377865 USP28Q96RU2 1077 aa9.93□□□□□ -0.82
PCDH9-202ENST00000377865 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.93□□□□□ -0.82
PCDH9-202ENST00000377865 SELENOOQ9BVL4 669 aa9.93□□□□□ -0.82
PCDH9-202ENST00000377865 NCOA5Q9HCD5 579 aaKnown RBP9.93□□□□□ -0.82
PCDH9-202ENST00000377865 CTDP1Q9Y5B0 961 aaPredicted RBP9.93□□□□□ -0.82
PCDH9-202ENST00000377865 SLC4A4Q9Y6R1 1079 aa9.93□□□□□ -0.82
PCDH9-202ENST00000377865 EYA2O00167 538 aa9.92□□□□□ -0.82
PCDH9-202ENST00000377865 PFKFB1P16118 471 aa9.92□□□□□ -0.82
PCDH9-202ENST00000377865 ZSCAN26Q16670 478 aa9.92□□□□□ -0.82
PCDH9-202ENST00000377865 PLA2G4DQ86XP0 818 aa9.92□□□□□ -0.82
PCDH9-202ENST00000377865 DBNDD2Q9BQY9 259 aa9.92□□□□□ -0.82
PCDH9-202ENST00000377865 ANKRD18AQ8IVF6 992 aa9.92□□□□□ -0.82
PCDH9-202ENST00000377865 CACTINQ8WUQ7 758 aaKnown RBP9.92□□□□□ -0.82
PCDH9-202ENST00000377865 DYDC1Q8WWB3 177 aa9.92□□□□□ -0.82
PCDH9-202ENST00000377865 NUP58Q9BVL2 599 aa9.92□□□□□ -0.82
PCDH9-202ENST00000377865 NRBP1Q9UHY1 535 aa9.92□□□□□ -0.82
PCDH9-202ENST00000377865 CTNND2Q9UQB3 1225 aa9.92□□□□□ -0.82
PCDH9-202ENST00000377865 USP5P45974 858 aa9.92□□□□□ -0.82
PCDH9-202ENST00000377865 SEPT7Q16181 437 aaKnown RBP9.92□□□□□ -0.82
PCDH9-202ENST00000377865 NSRP1Q9H0G5 558 aaKnown RBP9.92□□□□□ -0.82
PCDH9-202ENST00000377865 MKNK2Q9HBH9 465 aa9.92□□□□□ -0.82
PCDH9-202ENST00000377865 GNAQP50148 359 aa9.92□□□□□ -0.82
PCDH9-202ENST00000377865 VAV2P52735 878 aa9.92□□□□□ -0.82
PCDH9-202ENST00000377865 NCBP1Q09161 790 aaKnown RBP9.92□□□□□ -0.82
PCDH9-202ENST00000377865 GCKRQ14397 625 aa9.92□□□□□ -0.82
PCDH9-202ENST00000377865 PI4K2BQ8TCG2 481 aa9.92□□□□□ -0.82
PCDH9-202ENST00000377865 RABGGTAQ92696 567 aa9.92□□□□□ -0.82
PCDH9-202ENST00000377865 IQCDQ96DY2 449 aa9.92□□□□□ -0.82
PCDH9-202ENST00000377865 HAUS7Q99871 368 aa9.92□□□□□ -0.82
PCDH9-202ENST00000377865 BCCIPQ9P287 314 aaKnown RBP eCLIP9.92□□□□□ -0.82
PCDH9-202ENST00000377865 ABCA9Q8IUA7 1624 aa9.92□□□□□ -0.82
PCDH9-202ENST00000377865 IGSF1Q8N6C5 1336 aa9.92□□□□□ -0.82
PCDH9-202ENST00000377865 MTX1Q13505 466 aa9.91□□□□□ -0.82
PCDH9-202ENST00000377865 PPP2R5BQ15173 497 aa9.91□□□□□ -0.82
PCDH9-202ENST00000377865 ADCK5Q3MIX3 580 aa9.91□□□□□ -0.82
PCDH9-202ENST00000377865 TICAM2Q86XR7 235 aa9.91□□□□□ -0.82
PCDH9-202ENST00000377865 OTUD6BQ8N6M0 293 aa9.91□□□□□ -0.82
PCDH9-202ENST00000377865 DNAJC21Q5F1R6 531 aaKnown RBP9.91□□□□□ -0.82
PCDH9-202ENST00000377865 CCDC122Q5T0U0 273 aa9.91□□□□□ -0.82
PCDH9-202ENST00000377865 DCAF5Q96JK2 942 aa9.91□□□□□ -0.82
PCDH9-202ENST00000377865 ZFP91Q96JP5 570 aaPredicted RBP9.91□□□□□ -0.82
PCDH9-202ENST00000377865 CCDC42Q96M95 316 aa9.91□□□□□ -0.82
PCDH9-202ENST00000377865 SEPT11Q9NVA2 429 aaKnown RBP9.91□□□□□ -0.82
PCDH9-202ENST00000377865 DDX41Q9UJV9 622 aaKnown RBP9.91□□□□□ -0.82
PCDH9-202ENST00000377865 RCOR1Q9UKL0 485 aa9.91□□□□□ -0.82
PCDH9-202ENST00000377865 PCDHA7Q9UN72 937 aa9.91□□□□□ -0.82
PCDH9-202ENST00000377865 PPRC1Q5VV67 1664 aaKnown RBP9.91□□□□□ -0.82
PCDH9-202ENST00000377865 NRXN1Q9ULB1 1477 aa9.91□□□□□ -0.82
PCDH9-202ENST00000377865 STX10O60499 249 aa9.91□□□□□ -0.82
PCDH9-202ENST00000377865 GBP2P32456 591 aaPredicted RBP9.91□□□□□ -0.82
PCDH9-202ENST00000377865 MATR3P43243 847 aaKnown RBP eCLIP9.91□□□□□ -0.82
PCDH9-202ENST00000377865 RESTQ13127 1097 aa9.91□□□□□ -0.82
PCDH9-202ENST00000377865 CCDC121Q6ZUS5 278 aa9.91□□□□□ -0.82
PCDH9-202ENST00000377865 STMN4Q9H169 189 aaPredicted RBP9.91□□□□□ -0.82
PCDH9-202ENST00000377865 ALDH8A1Q9H2A2 487 aaPredicted RBP9.91□□□□□ -0.82
PCDH9-202ENST00000377865 NFE2L3Q9Y4A8 694 aa9.91□□□□□ -0.82
PCDH9-202ENST00000377865 C11orf57Q6ZUT1 292 aaPredicted RBP9.91□□□□□ -0.82
PCDH9-202ENST00000377865 ZNF444Q8N0Y2 327 aaPredicted RBP9.91□□□□□ -0.82
PCDH9-202ENST00000377865 RNF216Q9NWF9 866 aaPredicted RBP9.91□□□□□ -0.82
PCDH9-202ENST00000377865 WWC3Q9ULE0 1092 aa9.91□□□□□ -0.82
PCDH9-202ENST00000377865 INO80Q9ULG1 1556 aaPredicted RBP9.9□□□□□ -0.82
PCDH9-202ENST00000377865 STX17P56962 302 aa9.9□□□□□ -0.82
PCDH9-202ENST00000377865 SCRN1Q12765 414 aa9.9□□□□□ -0.82
PCDH9-202ENST00000377865 SLC39A6Q13433 755 aa9.9□□□□□ -0.82
PCDH9-202ENST00000377865 KRT40Q6A162 431 aa9.9□□□□□ -0.82
PCDH9-202ENST00000377865 FAM71BQ8TC56 605 aa9.9□□□□□ -0.82
PCDH9-202ENST00000377865 CAPZA3Q96KX2 299 aa9.9□□□□□ -0.82
PCDH9-202ENST00000377865 TTC14Q96N46 770 aa9.9□□□□□ -0.82
PCDH9-202ENST00000377865 CRNKL1Q9BZJ0 848 aaKnown RBP9.9□□□□□ -0.82
PCDH9-202ENST00000377865 MED4Q9NPJ6 270 aa9.9□□□□□ -0.82
PCDH9-202ENST00000377865 TBX22Q9Y458 520 aa9.9□□□□□ -0.82
PCDH9-202ENST00000377865 PXDNLA1KZ92 1463 aa9.9□□□□□ -0.82
PCDH9-202ENST00000377865 IKQ13123 557 aaPredicted RBP9.9□□□□□ -0.82
PCDH9-202ENST00000377865 ZFYVE27Q5T4F4 411 aa9.9□□□□□ -0.82
PCDH9-202ENST00000377865 POLR3EQ9NVU0 708 aa9.9□□□□□ -0.82
PCDH9-202ENST00000377865 ZMYM6O95789 1325 aa9.9□□□□□ -0.82
PCDH9-202ENST00000377865 USP6P35125 1406 aa9.9□□□□□ -0.82
PCDH9-202ENST00000377865 PPP6R2O75170 966 aa9.9□□□□□ -0.82
PCDH9-202ENST00000377865 LMBR1Q8WVP7 490 aa9.9□□□□□ -0.82
PCDH9-202ENST00000377865 CDC5LQ99459 802 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms