RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 FEZ2Q9UHY8 353 aaPredicted RBP16■□□□□ 0.15
LMX1B-202ENST00000373474 FAM184BQ9ULE4 1060 aa16■□□□□ 0.15
LMX1B-202ENST00000373474 GADD45BO75293 160 aaPredicted RBP16■□□□□ 0.15
LMX1B-202ENST00000373474 IL2RBP14784 551 aa16■□□□□ 0.15
LMX1B-202ENST00000373474 DTHD1Q6ZMT9 781 aa16■□□□□ 0.15
LMX1B-202ENST00000373474 SETDB2Q96T68 719 aa16■□□□□ 0.15
LMX1B-202ENST00000373474 ABCC4O15439 1325 aa16■□□□□ 0.15
LMX1B-202ENST00000373474 NCKAP5LQ9HCH0 1330 aa16■□□□□ 0.15
LMX1B-202ENST00000373474 ARHGEF10O15013 1369 aa16■□□□□ 0.15
LMX1B-202ENST00000373474 KIAA0232Q92628 1395 aa16■□□□□ 0.15
LMX1B-202ENST00000373474 PPP2R3AQ06190 1150 aa16■□□□□ 0.15
LMX1B-202ENST00000373474 PLBD2Q8NHP8 589 aa16■□□□□ 0.15
LMX1B-202ENST00000373474 TMEM87BQ96K49 555 aa16■□□□□ 0.15
LMX1B-202ENST00000373474 IMPACTQ9P2X3 320 aa16■□□□□ 0.15
LMX1B-202ENST00000373474 GABPB1Q06547 395 aaPredicted RBP16■□□□□ 0.15
LMX1B-202ENST00000373474 KRT79Q5XKE5 535 aa16■□□□□ 0.15
LMX1B-202ENST00000373474 LEO1Q8WVC0 666 aaPredicted RBP16■□□□□ 0.15
LMX1B-202ENST00000373474 SERPINA10Q9UK55 444 aa16■□□□□ 0.15
LMX1B-202ENST00000373474 TERF1P54274 439 aa15.99■□□□□ 0.15
LMX1B-202ENST00000373474 CTNND2Q9UQB3 1225 aa15.99■□□□□ 0.15
LMX1B-202ENST00000373474 PCDH11XQ9BZA7 1347 aa15.99■□□□□ 0.15
LMX1B-202ENST00000373474 PCDH11YQ9BZA8 1340 aa15.99■□□□□ 0.15
LMX1B-202ENST00000373474 SSH2Q76I76 1423 aa15.99■□□□□ 0.15
LMX1B-202ENST00000373474 CACNA2D3Q8IZS8 1091 aa15.99■□□□□ 0.15
LMX1B-202ENST00000373474 MYRIPQ8NFW9 859 aa15.99■□□□□ 0.15
LMX1B-202ENST00000373474 FAM227BQ96M60 508 aa15.99■□□□□ 0.15
LMX1B-202ENST00000373474 PNMA6EA0A0J9YXQ4 647 aa15.99■□□□□ 0.15
LMX1B-202ENST00000373474 ZWINTO95229 277 aa15.99■□□□□ 0.15
LMX1B-202ENST00000373474 RHOXF2BP0C7M4 288 aa15.99■□□□□ 0.15
LMX1B-202ENST00000373474 MAP3K9P80192 1104 aa15.99■□□□□ 0.15
LMX1B-202ENST00000373474 TRIM14Q14142 442 aa15.99■□□□□ 0.15
LMX1B-202ENST00000373474 SIRT1Q96EB6 747 aa15.99■□□□□ 0.15
LMX1B-202ENST00000373474 RHOXF2Q9BQY4 288 aa15.99■□□□□ 0.15
LMX1B-202ENST00000373474 SYNMO15061 1565 aa15.99■□□□□ 0.15
LMX1B-202ENST00000373474 ARHGEF5Q12774 1597 aa15.99■□□□□ 0.15
LMX1B-202ENST00000373474 RILPL1Q5EBL4 403 aa15.99■□□□□ 0.15
LMX1B-202ENST00000373474 NLRP3Q96P20 1036 aa15.99■□□□□ 0.15
LMX1B-202ENST00000373474 NYXQ9GZU5 481 aa15.99■□□□□ 0.15
LMX1B-202ENST00000373474 RIOK3O14730 519 aaKnown RBP15.98■□□□□ 0.15
LMX1B-202ENST00000373474 ATP11AP98196 1134 aa15.98■□□□□ 0.15
LMX1B-202ENST00000373474 COMMD10Q9Y6G5 202 aa15.98■□□□□ 0.15
LMX1B-202ENST00000373474 NLRP12P59046 1061 aa15.98■□□□□ 0.15
LMX1B-202ENST00000373474 USP37Q86T82 979 aa15.98■□□□□ 0.15
LMX1B-202ENST00000373474 RAB3IL1Q8TBN0 382 aa15.98■□□□□ 0.15
LMX1B-202ENST00000373474 TRIM7Q9C029 511 aa15.98■□□□□ 0.15
LMX1B-202ENST00000373474 KDM5DQ9BY66 1539 aa15.98■□□□□ 0.15
LMX1B-202ENST00000373474 TUBB2AQ13885 445 aa15.98■□□□□ 0.15
LMX1B-202ENST00000373474 BICD1Q96G01 975 aa15.98■□□□□ 0.15
LMX1B-202ENST00000373474 TUBB2BQ9BVA1 445 aa15.98■□□□□ 0.15
LMX1B-202ENST00000373474 EYA2O00167 538 aa15.98■□□□□ 0.15
LMX1B-202ENST00000373474 DEXIO95424 95 aa15.98■□□□□ 0.15
LMX1B-202ENST00000373474 ATP2A1O14983 1001 aa15.98■□□□□ 0.15
LMX1B-202ENST00000373474 MBD4O95243 580 aa15.98■□□□□ 0.15
LMX1B-202ENST00000373474 GCP02774 474 aa15.98■□□□□ 0.15
LMX1B-202ENST00000373474 EVCP57679 992 aa15.97■□□□□ 0.15
LMX1B-202ENST00000373474 SELENOSQ9BQE4 189 aa15.97■□□□□ 0.15
LMX1B-202ENST00000373474 GNA11P29992 359 aa15.97■□□□□ 0.15
LMX1B-202ENST00000373474 KRBA2Q6ZNG9 492 aa15.97■□□□□ 0.15
LMX1B-202ENST00000373474 CUTAO60888 179 aa15.97■□□□□ 0.15
LMX1B-202ENST00000373474 BRD1O95696 1058 aa15.97■□□□□ 0.15
LMX1B-202ENST00000373474 FANCCQ00597 558 aa15.97■□□□□ 0.15
LMX1B-202ENST00000373474 PPP1R2P41236 205 aa15.97■□□□□ 0.15
LMX1B-202ENST00000373474 CLNS1AP54105 237 aaKnown RBP15.97■□□□□ 0.15
LMX1B-202ENST00000373474 MCM9Q9NXL9 1143 aa15.97■□□□□ 0.15
LMX1B-202ENST00000373474 KCNH3Q9ULD8 1083 aa15.97■□□□□ 0.15
LMX1B-202ENST00000373474 STMN2Q93045 179 aa15.96■□□□□ 0.15
LMX1B-202ENST00000373474 MAP7D1Q3KQU3 841 aa15.96■□□□□ 0.15
LMX1B-202ENST00000373474 CDC37L1Q7L3B6 337 aa15.96■□□□□ 0.15
LMX1B-202ENST00000373474 CEP120Q8N960 986 aa15.96■□□□□ 0.15
LMX1B-202ENST00000373474 VWA3AA6NCI4 1184 aa15.96■□□□□ 0.15
LMX1B-202ENST00000373474 CIB2O75838 187 aa15.96■□□□□ 0.15
LMX1B-202ENST00000373474 ZNF174Q15697 407 aa15.96■□□□□ 0.15
LMX1B-202ENST00000373474 HELBQ8NG08 1087 aaPredicted RBP15.96■□□□□ 0.15
LMX1B-202ENST00000373474 ZKSCAN3Q9BRR0 538 aa15.96■□□□□ 0.15
LMX1B-202ENST00000373474 PABPN1LA6NDY0 278 aaKnown RBP15.96■□□□□ 0.15
LMX1B-202ENST00000373474 GSPT1P15170 499 aaKnown RBP15.96■□□□□ 0.15
LMX1B-202ENST00000373474 ALDH3A1P30838 453 aa15.96■□□□□ 0.15
LMX1B-202ENST00000373474 RPUSD2Q8IZ73 545 aaKnown RBP15.96■□□□□ 0.15
LMX1B-202ENST00000373474 MAGI3Q5TCQ9 1506 aa15.96■□□□□ 0.15
LMX1B-202ENST00000373474 B4E1Z4 1266 aa15.96■□□□□ 0.14
LMX1B-202ENST00000373474 GBP1P32455 592 aa15.96■□□□□ 0.14
LMX1B-202ENST00000373474 ARID5AQ03989 594 aa15.96■□□□□ 0.14
LMX1B-202ENST00000373474 ZNF790Q6PG37 636 aa15.96■□□□□ 0.14
LMX1B-202ENST00000373474 IGSF22Q8N9C0 903 aa15.96■□□□□ 0.14
LMX1B-202ENST00000373474 SMARCC2Q8TAQ2 1214 aa15.96■□□□□ 0.14
LMX1B-202ENST00000373474 SUCLG2Q96I99 432 aa15.96■□□□□ 0.14
LMX1B-202ENST00000373474 DBNDD2Q9BQY9 259 aa15.96■□□□□ 0.14
LMX1B-202ENST00000373474 ZNF219Q9P2Y4 722 aaPredicted RBP15.96■□□□□ 0.14
LMX1B-202ENST00000373474 VAV2P52735 878 aa15.95■□□□□ 0.14
LMX1B-202ENST00000373474 PICALMQ13492 652 aa15.95■□□□□ 0.14
LMX1B-202ENST00000373474 NGLY1Q96IV0 654 aa15.95■□□□□ 0.14
LMX1B-202ENST00000373474 TTF2Q9UNY4 1162 aaKnown RBP15.95■□□□□ 0.14
LMX1B-202ENST00000373474 PLCG2P16885 1265 aa15.95■□□□□ 0.14
LMX1B-202ENST00000373474 CYP26C1Q6V0L0 522 aa15.95■□□□□ 0.14
LMX1B-202ENST00000373474 MKRN1Q9UHC7 482 aaKnown RBP15.95■□□□□ 0.14
LMX1B-202ENST00000373474 SH3BGRP55822 239 aaPredicted RBP15.95■□□□□ 0.14
LMX1B-202ENST00000373474 CCDC122Q5T0U0 273 aa15.95■□□□□ 0.14
LMX1B-202ENST00000373474 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.95■□□□□ 0.14
LMX1B-202ENST00000373474 LRRC45Q96CN5 670 aa15.95■□□□□ 0.14
LMX1B-202ENST00000373474 ANKRD2Q9GZV1 360 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms