RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 TNS3Q68CZ2 1445 aa17.06■□□□□ 0.32
COL9A2-202ENST00000372748 EFCAB8A8MWE9 144 aa17.06■□□□□ 0.32
COL9A2-202ENST00000372748 IKBKBO14920 756 aa17.06■□□□□ 0.32
COL9A2-202ENST00000372748 CCP110O43303 1012 aa17.06■□□□□ 0.32
COL9A2-202ENST00000372748 TUBB4AP04350 444 aa17.06■□□□□ 0.32
COL9A2-202ENST00000372748 GYS2P54840 703 aa17.06■□□□□ 0.32
COL9A2-202ENST00000372748 GNG11P61952 73 aa17.06■□□□□ 0.32
COL9A2-202ENST00000372748 MYL5Q02045 173 aa17.06■□□□□ 0.32
COL9A2-202ENST00000372748 WASHC4Q2M389 1173 aa17.06■□□□□ 0.32
COL9A2-202ENST00000372748 SMARCE1Q969G3 411 aa17.06■□□□□ 0.32
COL9A2-202ENST00000372748 HPS5Q9UPZ3 1129 aa17.06■□□□□ 0.32
COL9A2-202ENST00000372748 PRC1O43663 620 aa17.05■□□□□ 0.32
COL9A2-202ENST00000372748 TBC1D8O95759 1140 aa17.05■□□□□ 0.32
COL9A2-202ENST00000372748 KIF23Q02241 960 aaPredicted RBP17.05■□□□□ 0.32
COL9A2-202ENST00000372748 CEP126Q9P2H0 1117 aa17.05■□□□□ 0.32
COL9A2-202ENST00000372748 PPP2R2CQ9Y2T4 447 aa17.05■□□□□ 0.32
COL9A2-202ENST00000372748 OAS2P29728 719 aaKnown RBP17.05■□□□□ 0.32
COL9A2-202ENST00000372748 FAM193AP78312 1265 aa17.05■□□□□ 0.32
COL9A2-202ENST00000372748 CREBRFQ8IUR6 639 aa17.05■□□□□ 0.32
COL9A2-202ENST00000372748 CCDC191Q8NCU4 936 aa17.05■□□□□ 0.32
COL9A2-202ENST00000372748 CLIC6Q96NY7 704 aa17.05■□□□□ 0.32
COL9A2-202ENST00000372748 RXRAP19793 462 aa17.04■□□□□ 0.32
COL9A2-202ENST00000372748 BRAPQ7Z569 592 aa17.04■□□□□ 0.32
COL9A2-202ENST00000372748 VSTM4Q8IW00 320 aa17.04■□□□□ 0.32
COL9A2-202ENST00000372748 STRN4Q9NRL3 753 aa17.04■□□□□ 0.32
COL9A2-202ENST00000372748 TULP2O00295 520 aa17.04■□□□□ 0.32
COL9A2-202ENST00000372748 CCDC57Q2TAC2 916 aa17.04■□□□□ 0.32
COL9A2-202ENST00000372748 CC2D1AQ6P1N0 951 aaPredicted RBP17.04■□□□□ 0.32
COL9A2-202ENST00000372748 SHC4Q6S5L8 630 aa17.04■□□□□ 0.32
COL9A2-202ENST00000372748 PI16Q6UXB8 463 aa17.04■□□□□ 0.32
COL9A2-202ENST00000372748 FAM89AQ96GI7 184 aa17.04■□□□□ 0.32
COL9A2-202ENST00000372748 PCDH11XQ9BZA7 1347 aa17.04■□□□□ 0.32
COL9A2-202ENST00000372748 PCDH11YQ9BZA8 1340 aa17.04■□□□□ 0.32
COL9A2-202ENST00000372748 GLI3P10071 1580 aa17.03■□□□□ 0.32
COL9A2-202ENST00000372748 SCARF1Q14162 830 aa17.03■□□□□ 0.32
COL9A2-202ENST00000372748 CCDC158Q5M9N0 1113 aa17.03■□□□□ 0.32
COL9A2-202ENST00000372748 TTC39AQ5SRH9 613 aa17.03■□□□□ 0.32
COL9A2-202ENST00000372748 CADPS2Q86UW7 1296 aa17.03■□□□□ 0.32
COL9A2-202ENST00000372748 SRRTQ9BXP5 876 aaKnown RBP17.03■□□□□ 0.32
COL9A2-202ENST00000372748 ZSWIM4Q9H7M6 989 aa17.03■□□□□ 0.32
COL9A2-202ENST00000372748 GPR108Q9NPR9 543 aa17.03■□□□□ 0.32
COL9A2-202ENST00000372748 ADKP55263 362 aaKnown RBP17.03■□□□□ 0.32
COL9A2-202ENST00000372748 RAD51AP2Q09MP3 1159 aa17.03■□□□□ 0.32
COL9A2-202ENST00000372748 TMEM139Q8IV31 216 aa17.03■□□□□ 0.32
COL9A2-202ENST00000372748 SYNE4Q8N205 404 aa17.03■□□□□ 0.32
COL9A2-202ENST00000372748 INTS13Q9NVM9 706 aa17.03■□□□□ 0.32
COL9A2-202ENST00000372748 ZSCAN12O43309 604 aa17.03■□□□□ 0.32
COL9A2-202ENST00000372748 CBFA2T2O43439 604 aa17.03■□□□□ 0.32
COL9A2-202ENST00000372748 DHX16O60231 1041 aaKnown RBP17.03■□□□□ 0.32
COL9A2-202ENST00000372748 CDC27P30260 824 aa17.03■□□□□ 0.32
COL9A2-202ENST00000372748 CASQ1P31415 396 aa17.03■□□□□ 0.32
COL9A2-202ENST00000372748 DHX8Q14562 1220 aaKnown RBP17.03■□□□□ 0.32
COL9A2-202ENST00000372748 SMC1AQ14683 1233 aaKnown RBP17.03■□□□□ 0.32
COL9A2-202ENST00000372748 SLC39A14Q15043 492 aa17.03■□□□□ 0.32
COL9A2-202ENST00000372748 TOGARAM2Q6ZUX3 1019 aa17.03■□□□□ 0.32
COL9A2-202ENST00000372748 XAGE2Q96GT9 111 aa17.03■□□□□ 0.32
COL9A2-202ENST00000372748 DESI2Q9BSY9 194 aa17.03■□□□□ 0.32
COL9A2-202ENST00000372748 TUBE1Q9UJT0 475 aa17.03■□□□□ 0.32
COL9A2-202ENST00000372748 DENND2AQ9ULE3 1009 aa17.03■□□□□ 0.32
COL9A2-202ENST00000372748 FOXN1O15353 648 aa17.02■□□□□ 0.32
COL9A2-202ENST00000372748 FOXP2O15409 715 aa17.02■□□□□ 0.32
COL9A2-202ENST00000372748 SPECC1Q5M775 1068 aa17.02■□□□□ 0.32
COL9A2-202ENST00000372748 KRBA2Q6ZNG9 492 aa17.02■□□□□ 0.32
COL9A2-202ENST00000372748 FOXP4Q8IVH2 680 aaPredicted RBP17.02■□□□□ 0.32
COL9A2-202ENST00000372748 FGAP02671 866 aa17.02■□□□□ 0.31
COL9A2-202ENST00000372748 ANTXR2P58335 489 aa17.02■□□□□ 0.31
COL9A2-202ENST00000372748 PPP2R3AQ06190 1150 aa17.02■□□□□ 0.31
COL9A2-202ENST00000372748 PDE4BQ07343 736 aa17.02■□□□□ 0.31
COL9A2-202ENST00000372748 IMMTQ16891 758 aaKnown RBP17.02■□□□□ 0.31
COL9A2-202ENST00000372748 BAG1Q99933 345 aaPredicted RBP17.02■□□□□ 0.31
COL9A2-202ENST00000372748 PKD1L3Q7Z443 1732 aa17.02■□□□□ 0.31
COL9A2-202ENST00000372748 ARHGAP6O43182 974 aa17.01■□□□□ 0.31
COL9A2-202ENST00000372748 KARSQ15046 597 aaKnown RBP17.01■□□□□ 0.31
COL9A2-202ENST00000372748 LONRF3Q496Y0 759 aa17.01■□□□□ 0.31
COL9A2-202ENST00000372748 TAF7LQ5H9L4 462 aa17.01■□□□□ 0.31
COL9A2-202ENST00000372748 PARD6BQ9BYG5 372 aa17.01■□□□□ 0.31
COL9A2-202ENST00000372748 WDR17Q8IZU2 1322 aa17.01■□□□□ 0.31
COL9A2-202ENST00000372748 ERVV-2B6SEH9 535 aa17.01■□□□□ 0.31
COL9A2-202ENST00000372748 ZAP70P43403 619 aa17.01■□□□□ 0.31
COL9A2-202ENST00000372748 OLFM4Q6UX06 510 aa17.01■□□□□ 0.31
COL9A2-202ENST00000372748 METTL16Q86W50 562 aaKnown RBP17.01■□□□□ 0.31
COL9A2-202ENST00000372748 VPS37DQ86XT2 251 aa17.01■□□□□ 0.31
COL9A2-202ENST00000372748 CHMP4CQ96CF2 233 aa17.01■□□□□ 0.31
COL9A2-202ENST00000372748 IRX2Q9BZI1 471 aaPredicted RBP17.01■□□□□ 0.31
COL9A2-202ENST00000372748 PCDHA5Q9Y5H7 936 aa17.01■□□□□ 0.31
COL9A2-202ENST00000372748 PUS7LQ9H0K6 701 aaKnown RBP17■□□□□ 0.31
COL9A2-202ENST00000372748 BMP6P22004 513 aa17■□□□□ 0.31
COL9A2-202ENST00000372748 MAP3K9P80192 1104 aa17■□□□□ 0.31
COL9A2-202ENST00000372748 RALYLQ86SE5 291 aaKnown RBP17■□□□□ 0.31
COL9A2-202ENST00000372748 PHKBQ93100 1093 aa17■□□□□ 0.31
COL9A2-202ENST00000372748 ALG1Q9BT22 464 aa17■□□□□ 0.31
COL9A2-202ENST00000372748 ARFGAP3Q9NP61 516 aa17■□□□□ 0.31
COL9A2-202ENST00000372748 STRCP1A6NGW2 1772 aa16.99■□□□□ 0.31
COL9A2-202ENST00000372748 MB21D2Q8IYB1 491 aaPredicted RBP16.99■□□□□ 0.31
COL9A2-202ENST00000372748 STK11IPQ8N1F8 1099 aa16.99■□□□□ 0.31
COL9A2-202ENST00000372748 NKX2-3Q8TAU0 364 aa16.99■□□□□ 0.31
COL9A2-202ENST00000372748 DHX58Q96C10 678 aa16.99■□□□□ 0.31
COL9A2-202ENST00000372748 MPHOSPH8Q99549 860 aa16.99■□□□□ 0.31
COL9A2-202ENST00000372748 TRIM34Q9BYJ4 488 aa16.99■□□□□ 0.31
COL9A2-202ENST00000372748 UBXN6Q9BZV1 441 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms