RNA–Protein interactions for RNA: ENST00000370817.3

COL21A1-202, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 3

Gene COL21A1, Length 624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-202ENST00000370817 GDF11O95390 407 aa10.59□□□□□ -0.71
COL21A1-202ENST00000370817 MYCP01106 439 aaPredicted RBP10.59□□□□□ -0.71
COL21A1-202ENST00000370817 CELA2BP08218 269 aaPredicted RBP10.59□□□□□ -0.71
COL21A1-202ENST00000370817 GYS1P13807 737 aa10.59□□□□□ -0.71
COL21A1-202ENST00000370817 TSGA10IPQ3SY00 556 aa10.59□□□□□ -0.71
COL21A1-202ENST00000370817 TRAPPC3LQ5T215 181 aa10.59□□□□□ -0.71
COL21A1-202ENST00000370817 TIMMDC1Q9NPL8 285 aa10.59□□□□□ -0.71
COL21A1-202ENST00000370817 N4BP2Q86UW6 1770 aaPredicted RBP10.59□□□□□ -0.71
COL21A1-202ENST00000370817 CENPCQ03188 943 aa10.58□□□□□ -0.72
COL21A1-202ENST00000370817 FOXR1Q6PIV2 292 aa10.58□□□□□ -0.72
COL21A1-202ENST00000370817 SRP68Q9UHB9 627 aaKnown RBP10.58□□□□□ -0.72
COL21A1-202ENST00000370817 NARFQ9UHQ1 456 aa10.58□□□□□ -0.72
COL21A1-202ENST00000370817 HRH3Q9Y5N1 445 aa10.58□□□□□ -0.72
COL21A1-202ENST00000370817 UTRNP46939 3433 aa10.58□□□□□ -0.72
COL21A1-202ENST00000370817 COL11A2P13942 1736 aaPredicted RBP10.58□□□□□ -0.72
COL21A1-202ENST00000370817 FANCIQ9NVI1 1328 aa10.58□□□□□ -0.72
COL21A1-202ENST00000370817 LAMB2P55268 1798 aa10.57□□□□□ -0.72
COL21A1-202ENST00000370817 CANXP27824 592 aaKnown RBP10.57□□□□□ -0.72
COL21A1-202ENST00000370817 PIP4K2AP48426 406 aaPredicted RBP10.57□□□□□ -0.72
COL21A1-202ENST00000370817 PHTF2Q8N3S3 785 aa10.57□□□□□ -0.72
COL21A1-202ENST00000370817 TSR2Q969E8 191 aaKnown RBP10.57□□□□□ -0.72
COL21A1-202ENST00000370817 LAS1LQ9Y4W2 734 aaKnown RBP10.57□□□□□ -0.72
COL21A1-202ENST00000370817 ARFGEF1Q9Y6D6 1849 aa10.56□□□□□ -0.72
COL21A1-202ENST00000370817 CAMTA2O94983 1202 aa10.56□□□□□ -0.72
COL21A1-202ENST00000370817 F11P03951 625 aa10.56□□□□□ -0.72
COL21A1-202ENST00000370817 RFC4P35249 363 aa10.56□□□□□ -0.72
COL21A1-202ENST00000370817 IRS1P35568 1242 aa10.56□□□□□ -0.72
COL21A1-202ENST00000370817 MARSP56192 900 aaKnown RBP10.56□□□□□ -0.72
COL21A1-202ENST00000370817 MAP3K10Q02779 954 aa10.56□□□□□ -0.72
COL21A1-202ENST00000370817 MSL1Q68DK7 614 aa10.56□□□□□ -0.72
COL21A1-202ENST00000370817 C8orf58Q8NAV2 365 aa10.56□□□□□ -0.72
COL21A1-202ENST00000370817 XAGE2Q96GT9 111 aa10.56□□□□□ -0.72
COL21A1-202ENST00000370817 PRM3Q9NNZ6 103 aa10.56□□□□□ -0.72
COL21A1-202ENST00000370817 C10orf71Q711Q0 1435 aa10.56□□□□□ -0.72
COL21A1-202ENST00000370817 CACNA1SQ13698 1873 aa10.55□□□□□ -0.72
COL21A1-202ENST00000370817 A0A087WZG4 1122 aa10.55□□□□□ -0.72
COL21A1-202ENST00000370817 TM4SF1P30408 202 aa10.55□□□□□ -0.72
COL21A1-202ENST00000370817 PROSER3Q2NL68 480 aa10.55□□□□□ -0.72
COL21A1-202ENST00000370817 DUSP27Q5VZP5 1158 aa10.55□□□□□ -0.72
COL21A1-202ENST00000370817 USPL1Q5W0Q7 1092 aa10.55□□□□□ -0.72
COL21A1-202ENST00000370817 TRMT2AQ8IZ69 625 aaKnown RBP10.55□□□□□ -0.72
COL21A1-202ENST00000370817 TSPYL6Q8N831 410 aa10.55□□□□□ -0.72
COL21A1-202ENST00000370817 FHDC1Q9C0D6 1143 aaPredicted RBP10.55□□□□□ -0.72
COL21A1-202ENST00000370817 NUCKS1Q9H1E3 243 aaKnown RBP10.55□□□□□ -0.72
COL21A1-202ENST00000370817 DOLKQ9UPQ8 538 aa10.55□□□□□ -0.72
COL21A1-202ENST00000370817 DDX60Q8IY21 1712 aaKnown RBP10.55□□□□□ -0.72
COL21A1-202ENST00000370817 TNRC6CQ9HCJ0 1690 aaKnown RBP10.54□□□□□ -0.72
COL21A1-202ENST00000370817 STAU1O95793 577 aaKnown RBP10.54□□□□□ -0.72
COL21A1-202ENST00000370817 THBS1P07996 1170 aa10.54□□□□□ -0.72
COL21A1-202ENST00000370817 PHKA2P46019 1235 aa10.54□□□□□ -0.72
COL21A1-202ENST00000370817 DDR1Q08345 913 aa10.54□□□□□ -0.72
COL21A1-202ENST00000370817 VAC14Q08AM6 782 aa10.54□□□□□ -0.72
COL21A1-202ENST00000370817 NLGN1Q8N2Q7 840 aa10.54□□□□□ -0.72
COL21A1-202ENST00000370817 TRERF1Q96PN7 1200 aa10.54□□□□□ -0.72
COL21A1-202ENST00000370817 ZSCAN10Q96SZ4 725 aaPredicted RBP10.54□□□□□ -0.72
COL21A1-202ENST00000370817 DDX21Q9NR30 783 aaKnown RBP eCLIP10.54□□□□□ -0.72
COL21A1-202ENST00000370817 ATP10DQ9P241 1426 aa10.54□□□□□ -0.72
COL21A1-202ENST00000370817 POLRMTO00411 1230 aaKnown RBP10.53□□□□□ -0.72
COL21A1-202ENST00000370817 SLFNL1Q499Z3 407 aa10.53□□□□□ -0.72
COL21A1-202ENST00000370817 HDGFL1Q5TGJ6 251 aa10.53□□□□□ -0.72
COL21A1-202ENST00000370817 RNF135Q8IUD6 432 aa10.53□□□□□ -0.72
COL21A1-202ENST00000370817 GDPD2Q9HCC8 539 aa10.53□□□□□ -0.72
COL21A1-202ENST00000370817 GPAMQ9HCL2 828 aa10.53□□□□□ -0.72
COL21A1-202ENST00000370817 CHPF2Q9P2E5 772 aa10.53□□□□□ -0.72
COL21A1-202ENST00000370817 MYH3P11055 1940 aa10.52□□□□□ -0.72
COL21A1-202ENST00000370817 ANXA1P04083 346 aa10.52□□□□□ -0.73
COL21A1-202ENST00000370817 MMP10P09238 476 aa10.52□□□□□ -0.73
COL21A1-202ENST00000370817 EIF2S2P20042 333 aaKnown RBP10.52□□□□□ -0.73
COL21A1-202ENST00000370817 POLD1P28340 1107 aa10.52□□□□□ -0.73
COL21A1-202ENST00000370817 SLFN5Q08AF3 891 aa10.52□□□□□ -0.73
COL21A1-202ENST00000370817 NFIXQ14938 502 aa10.52□□□□□ -0.73
COL21A1-202ENST00000370817 CLEC4GQ6UXB4 293 aa10.52□□□□□ -0.73
COL21A1-202ENST00000370817 TTLL7Q6ZT98 887 aa10.52□□□□□ -0.73
COL21A1-202ENST00000370817 ACDQ96AP0 544 aa10.52□□□□□ -0.73
COL21A1-202ENST00000370817 SCARF2Q96GP6 870 aaPredicted RBP10.52□□□□□ -0.73
COL21A1-202ENST00000370817 ETNK1Q9HBU6 452 aa10.52□□□□□ -0.73
COL21A1-202ENST00000370817 CHD4Q14839 1912 aa10.52□□□□□ -0.73
COL21A1-202ENST00000370817 MAP3K15Q6ZN16 1313 aa10.52□□□□□ -0.73
COL21A1-202ENST00000370817 PXDNLA1KZ92 1463 aa10.51□□□□□ -0.73
COL21A1-202ENST00000370817 ERVV-1B6SEH8 477 aa10.51□□□□□ -0.73
COL21A1-202ENST00000370817 E9PSI1 815 aa10.51□□□□□ -0.73
COL21A1-202ENST00000370817 VAMP4O75379 141 aa10.51□□□□□ -0.73
COL21A1-202ENST00000370817 MYL6BP14649 208 aa10.51□□□□□ -0.73
COL21A1-202ENST00000370817 MX2P20592 715 aa10.51□□□□□ -0.73
COL21A1-202ENST00000370817 EXOSC9Q06265 439 aaKnown RBP10.51□□□□□ -0.73
COL21A1-202ENST00000370817 USP4Q13107 963 aa10.51□□□□□ -0.73
COL21A1-202ENST00000370817 HLFQ16534 295 aa10.51□□□□□ -0.73
COL21A1-202ENST00000370817 TWISTNBQ3B726 338 aaPredicted RBP10.51□□□□□ -0.73
COL21A1-202ENST00000370817 TBC1D9BQ66K14 1250 aa10.51□□□□□ -0.73
COL21A1-202ENST00000370817 MYH16Q9H6N6 1097 aa10.51□□□□□ -0.73
COL21A1-202ENST00000370817 C1orf115Q9H7X2 142 aa10.51□□□□□ -0.73
COL21A1-202ENST00000370817 DBF4Q9UBU7 674 aaPredicted RBP10.51□□□□□ -0.73
COL21A1-202ENST00000370817 ELL2O00472 640 aaPredicted RBP10.5□□□□□ -0.73
COL21A1-202ENST00000370817 ABL2P42684 1182 aa10.5□□□□□ -0.73
COL21A1-202ENST00000370817 C4orf17Q53FE4 359 aa10.5□□□□□ -0.73
COL21A1-202ENST00000370817 OXLD1Q5BKU9 147 aa10.5□□□□□ -0.73
COL21A1-202ENST00000370817 TMEM214Q6NUQ4 689 aaKnown RBP10.5□□□□□ -0.73
COL21A1-202ENST00000370817 ENAMQ9NRM1 1142 aa10.5□□□□□ -0.73
COL21A1-202ENST00000370817 CARMIL3Q8ND23 1372 aa10.5□□□□□ -0.73
COL21A1-202ENST00000370817 IBTKQ9P2D0 1353 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms