RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 LONRF3Q496Y0 759 aa17.93■□□□□ 0.46
COL17A1-202ENST00000369733 KIAA1468Q9P260 1216 aa17.93■□□□□ 0.46
COL17A1-202ENST00000369733 TPCN1Q9ULQ1 816 aa17.93■□□□□ 0.46
COL17A1-202ENST00000369733 LDHCP07864 332 aa17.93■□□□□ 0.46
COL17A1-202ENST00000369733 TTC14Q96N46 770 aa17.93■□□□□ 0.46
COL17A1-202ENST00000369733 NCKAP5LQ9HCH0 1330 aa17.93■□□□□ 0.46
COL17A1-202ENST00000369733 TBC1D8BQ0IIM8 1120 aa17.93■□□□□ 0.46
COL17A1-202ENST00000369733 SLF2Q8IX21 1173 aa17.93■□□□□ 0.46
COL17A1-202ENST00000369733 DDX12PQ92771 950 aa17.93■□□□□ 0.46
COL17A1-202ENST00000369733 ZKSCAN3Q9BRR0 538 aa17.93■□□□□ 0.46
COL17A1-202ENST00000369733 BABAM1Q9NWV8 329 aa17.93■□□□□ 0.46
COL17A1-202ENST00000369733 EFCAB8A8MWE9 144 aa17.92■□□□□ 0.46
COL17A1-202ENST00000369733 B4E1Z4 1266 aa17.92■□□□□ 0.46
COL17A1-202ENST00000369733 CCDC77Q9BR77 488 aa17.92■□□□□ 0.46
COL17A1-202ENST00000369733 NRBP1Q9UHY1 535 aa17.92■□□□□ 0.46
COL17A1-202ENST00000369733 POSTNQ15063 836 aa17.92■□□□□ 0.46
COL17A1-202ENST00000369733 ADALQ6DHV7 355 aa17.92■□□□□ 0.46
COL17A1-202ENST00000369733 NOC4LQ9BVI4 516 aaKnown RBP17.92■□□□□ 0.46
COL17A1-202ENST00000369733 ZSWIM6Q9HCJ5 1215 aa17.92■□□□□ 0.46
COL17A1-202ENST00000369733 KIF21AQ7Z4S6 1674 aa17.92■□□□□ 0.46
COL17A1-202ENST00000369733 KIAA0232Q92628 1395 aa17.92■□□□□ 0.46
COL17A1-202ENST00000369733 A6NNZ2 444 aa17.92■□□□□ 0.46
COL17A1-202ENST00000369733 TUBB8Q3ZCM7 444 aa17.92■□□□□ 0.46
COL17A1-202ENST00000369733 FAM135BQ49AJ0 1406 aa17.92■□□□□ 0.46
COL17A1-202ENST00000369733 ERBB4Q15303 1308 aa17.92■□□□□ 0.46
COL17A1-202ENST00000369733 MAGEB6P1A0A0J9YX57 407 aa17.92■□□□□ 0.46
COL17A1-202ENST00000369733 ADKP55263 362 aaKnown RBP17.92■□□□□ 0.46
COL17A1-202ENST00000369733 TIMM10P62072 90 aa17.92■□□□□ 0.46
COL17A1-202ENST00000369733 ETF1P62495 437 aaKnown RBP17.92■□□□□ 0.46
COL17A1-202ENST00000369733 CCDC152Q4G0S7 254 aa17.92■□□□□ 0.46
COL17A1-202ENST00000369733 ERMNQ8TAM6 284 aa17.92■□□□□ 0.46
COL17A1-202ENST00000369733 DDX21Q9NR30 783 aaKnown RBP eCLIP17.92■□□□□ 0.46
COL17A1-202ENST00000369733 TMEM87BQ96K49 555 aa17.92■□□□□ 0.46
COL17A1-202ENST00000369733 ANGEL1Q9UNK9 670 aaKnown RBP17.92■□□□□ 0.46
COL17A1-202ENST00000369733 PNOCQ13519 176 aa17.91■□□□□ 0.46
COL17A1-202ENST00000369733 DNAJC5BQ9UF47 199 aa17.91■□□□□ 0.46
COL17A1-202ENST00000369733 ZPR1O75312 459 aa17.91■□□□□ 0.46
COL17A1-202ENST00000369733 DEXIO95424 95 aa17.91■□□□□ 0.46
COL17A1-202ENST00000369733 NAA25Q14CX7 972 aa17.91■□□□□ 0.46
COL17A1-202ENST00000369733 MIGA1Q8NAN2 632 aa17.91■□□□□ 0.46
COL17A1-202ENST00000369733 NFATC2IPQ8NCF5 419 aa17.91■□□□□ 0.46
COL17A1-202ENST00000369733 HOXC9P31274 260 aa17.91■□□□□ 0.46
COL17A1-202ENST00000369733 TRMT44Q8IYL2 757 aaKnown RBP17.91■□□□□ 0.46
COL17A1-202ENST00000369733 KIAA1524Q8TCG1 905 aa17.91■□□□□ 0.46
COL17A1-202ENST00000369733 EDC4Q6P2E9 1401 aaKnown RBP17.9■□□□□ 0.46
COL17A1-202ENST00000369733 RNMTO43148 476 aaKnown RBP17.9■□□□□ 0.46
COL17A1-202ENST00000369733 DIS3L2Q8IYB7 885 aaKnown RBP17.9■□□□□ 0.46
COL17A1-202ENST00000369733 SECISBP2LQ93073 1101 aaKnown RBP17.9■□□□□ 0.46
COL17A1-202ENST00000369733 KRT9P35527 623 aa17.9■□□□□ 0.46
COL17A1-202ENST00000369733 PAK1Q13153 545 aa17.9■□□□□ 0.46
COL17A1-202ENST00000369733 C6orf50Q9HD87 102 aa17.9■□□□□ 0.46
COL17A1-202ENST00000369733 MAPK8IP1Q9UQF2 711 aa17.9■□□□□ 0.46
COL17A1-202ENST00000369733 KRT79Q5XKE5 535 aa17.9■□□□□ 0.46
COL17A1-202ENST00000369733 USP28Q96RU2 1077 aa17.9■□□□□ 0.46
COL17A1-202ENST00000369733 SLF1Q9BQI6 1058 aa17.9■□□□□ 0.46
COL17A1-202ENST00000369733 EHMT1Q9H9B1 1298 aa17.9■□□□□ 0.46
COL17A1-202ENST00000369733 PPP2R2CQ9Y2T4 447 aa17.9■□□□□ 0.46
COL17A1-202ENST00000369733 KRT40Q6A162 431 aa17.9■□□□□ 0.46
COL17A1-202ENST00000369733 KBTBD3Q8NAB2 608 aa17.9■□□□□ 0.46
COL17A1-202ENST00000369733 TDRD7Q8NHU6 1098 aaKnown RBP17.9■□□□□ 0.46
COL17A1-202ENST00000369733 SUCLG2Q96I99 432 aa17.9■□□□□ 0.46
COL17A1-202ENST00000369733 IKBKGQ9Y6K9 419 aa17.9■□□□□ 0.46
COL17A1-202ENST00000369733 NDUFB9Q9Y6M9 179 aa17.9■□□□□ 0.46
COL17A1-202ENST00000369733 CDC25BP30305 580 aa17.89■□□□□ 0.46
COL17A1-202ENST00000369733 HOMER2Q9NSB8 354 aa17.89■□□□□ 0.46
COL17A1-202ENST00000369733 RBM28Q9NW13 759 aaKnown RBP17.89■□□□□ 0.46
COL17A1-202ENST00000369733 ADAMTS12P58397 1594 aa17.89■□□□□ 0.45
COL17A1-202ENST00000369733 IFT20Q8IY31 132 aa17.89■□□□□ 0.45
COL17A1-202ENST00000369733 TAB2Q9NYJ8 693 aa17.89■□□□□ 0.45
COL17A1-202ENST00000369733 HOXB7P09629 217 aa17.89■□□□□ 0.45
COL17A1-202ENST00000369733 PFKFB1P16118 471 aa17.89■□□□□ 0.45
COL17A1-202ENST00000369733 TMEM110-MUSTN1A8MSY1 372 aa17.88■□□□□ 0.45
COL17A1-202ENST00000369733 STAMBPO95630 424 aa17.88■□□□□ 0.45
COL17A1-202ENST00000369733 PAF1Q8N7H5 531 aa17.88■□□□□ 0.45
COL17A1-202ENST00000369733 MTRF1LQ9UGC7 380 aaKnown RBP17.88■□□□□ 0.45
COL17A1-202ENST00000369733 A0A1B0GUA9 196 aa17.88■□□□□ 0.45
COL17A1-202ENST00000369733 CEBPAP49715 358 aaPredicted RBP17.88■□□□□ 0.45
COL17A1-202ENST00000369733 SSH3Q8TE77 659 aa17.88■□□□□ 0.45
COL17A1-202ENST00000369733 KDM6BO15054 1643 aa17.88■□□□□ 0.45
COL17A1-202ENST00000369733 ARHGAP25P42331 645 aa17.88■□□□□ 0.45
COL17A1-202ENST00000369733 GRIPAP1Q4V328 841 aa17.88■□□□□ 0.45
COL17A1-202ENST00000369733 CEP63Q96MT8 703 aa17.88■□□□□ 0.45
COL17A1-202ENST00000369733 TMOD2Q9NZR1 351 aa17.88■□□□□ 0.45
COL17A1-202ENST00000369733 PPFIA1Q13136 1202 aa17.88■□□□□ 0.45
COL17A1-202ENST00000369733 CHRNA2Q15822 529 aa17.88■□□□□ 0.45
COL17A1-202ENST00000369733 PLEKHF1Q96S99 279 aa17.88■□□□□ 0.45
COL17A1-202ENST00000369733 DESI2Q9BSY9 194 aa17.88■□□□□ 0.45
COL17A1-202ENST00000369733 ADGBQ8N7X0 1667 aa17.88■□□□□ 0.45
COL17A1-202ENST00000369733 MBD4O95243 580 aa17.88■□□□□ 0.45
COL17A1-202ENST00000369733 CUL4AQ13619 759 aa17.88■□□□□ 0.45
COL17A1-202ENST00000369733 MYSM1Q5VVJ2 828 aa17.88■□□□□ 0.45
COL17A1-202ENST00000369733 SND1Q7KZF4 910 aaKnown RBP eCLIP17.88■□□□□ 0.45
COL17A1-202ENST00000369733 ZNF518AQ6AHZ1 1483 aa17.88■□□□□ 0.45
COL17A1-202ENST00000369733 PSDA5PKW4 1024 aaPredicted RBP17.87■□□□□ 0.45
COL17A1-202ENST00000369733 CCDC26Q8TAB7 109 aa17.87■□□□□ 0.45
COL17A1-202ENST00000369733 PHKBQ93100 1093 aa17.87■□□□□ 0.45
COL17A1-202ENST00000369733 PPP1R13BQ96KQ4 1090 aa17.87■□□□□ 0.45
COL17A1-202ENST00000369733 KCNK9Q9NPC2 374 aa17.87■□□□□ 0.45
COL17A1-202ENST00000369733 WWC3Q9ULE0 1092 aa17.87■□□□□ 0.45
COL17A1-202ENST00000369733 E7EWF7 191 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms