RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 DENND2AQ9ULE3 1009 aa18.37■□□□□ 0.53
SYNCRIP-202ENST00000369622 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.37■□□□□ 0.539e-11■□□□□ 10.5
SYNCRIP-202ENST00000369622 ZNF213O14771 459 aa18.37■□□□□ 0.53
SYNCRIP-202ENST00000369622 SARM1Q6SZW1 724 aa18.37■□□□□ 0.53
SYNCRIP-202ENST00000369622 LINC00301Q8NCQ3 95 aa18.37■□□□□ 0.53
SYNCRIP-202ENST00000369622 AK7Q96M32 723 aa18.37■□□□□ 0.53
SYNCRIP-202ENST00000369622 XPO4Q9C0E2 1151 aaKnown RBP18.37■□□□□ 0.53
SYNCRIP-202ENST00000369622 EIF3CLB5ME19 914 aaKnown RBP18.36■□□□□ 0.53
SYNCRIP-202ENST00000369622 GOLGA5Q8TBA6 731 aa18.36■□□□□ 0.53
SYNCRIP-202ENST00000369622 EIF3CQ99613 913 aaKnown RBP18.36■□□□□ 0.53
SYNCRIP-202ENST00000369622 CARD6Q9BX69 1037 aa18.36■□□□□ 0.53
SYNCRIP-202ENST00000369622 KIAA1468Q9P260 1216 aa18.36■□□□□ 0.53
SYNCRIP-202ENST00000369622 URI1O94763 535 aaPredicted RBP18.36■□□□□ 0.53
SYNCRIP-202ENST00000369622 CDC25BP30305 580 aa18.36■□□□□ 0.53
SYNCRIP-202ENST00000369622 TMED8Q6PL24 325 aaPredicted RBP18.36■□□□□ 0.53
SYNCRIP-202ENST00000369622 SYNE4Q8N205 404 aa18.36■□□□□ 0.53
SYNCRIP-202ENST00000369622 CCZ1BP86790 482 aa18.36■□□□□ 0.53
SYNCRIP-202ENST00000369622 CCZ1P86791 482 aaPredicted RBP18.36■□□□□ 0.53
SYNCRIP-202ENST00000369622 HSP90AA4PQ58FG1 418 aa18.36■□□□□ 0.53
SYNCRIP-202ENST00000369622 NOM1Q5C9Z4 860 aaKnown RBP18.36■□□□□ 0.53
SYNCRIP-202ENST00000369622 BRMS1Q9HCU9 246 aa18.36■□□□□ 0.53
SYNCRIP-202ENST00000369622 ZNF202O95125 648 aa18.35■□□□□ 0.53
SYNCRIP-202ENST00000369622 LEKR1Q6ZMV7 388 aa18.35■□□□□ 0.53
SYNCRIP-202ENST00000369622 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.35■□□□□ 0.534e-7■□□□□ 9.9
SYNCRIP-202ENST00000369622 RTEL1Q9NZ71 1219 aa18.35■□□□□ 0.53
SYNCRIP-202ENST00000369622 PALLDQ8WX93 1383 aa18.35■□□□□ 0.53
SYNCRIP-202ENST00000369622 TBC1D8O95759 1140 aa18.35■□□□□ 0.53
SYNCRIP-202ENST00000369622 GPTP24298 496 aa18.35■□□□□ 0.53
SYNCRIP-202ENST00000369622 TRDNQ13061 729 aa18.35■□□□□ 0.53
SYNCRIP-202ENST00000369622 MYSM1Q5VVJ2 828 aa18.35■□□□□ 0.53
SYNCRIP-202ENST00000369622 AGXT2Q9BYV1 514 aa18.35■□□□□ 0.53
SYNCRIP-202ENST00000369622 VPS18Q9P253 973 aa18.35■□□□□ 0.53
SYNCRIP-202ENST00000369622 SUFUQ9UMX1 484 aa18.35■□□□□ 0.53
SYNCRIP-202ENST00000369622 KIF28PB7ZC32 967 aa18.34■□□□□ 0.53
SYNCRIP-202ENST00000369622 NEMFO60524 1076 aa18.34■□□□□ 0.53
SYNCRIP-202ENST00000369622 IDH1O75874 414 aaKnown RBP18.34■□□□□ 0.53
SYNCRIP-202ENST00000369622 NCOA7Q8NI08 942 aa18.34■□□□□ 0.53
SYNCRIP-202ENST00000369622 CHD2O14647 1828 aaKnown RBP18.34■□□□□ 0.53
SYNCRIP-202ENST00000369622 H3BQF6 201 aa18.34■□□□□ 0.53
SYNCRIP-202ENST00000369622 MICU3Q86XE3 530 aa18.34■□□□□ 0.53
SYNCRIP-202ENST00000369622 PHKBQ93100 1093 aa18.34■□□□□ 0.53
SYNCRIP-202ENST00000369622 RFX7Q2KHR2 1363 aa18.34■□□□□ 0.53
SYNCRIP-202ENST00000369622 SALL1Q9NSC2 1324 aa18.34■□□□□ 0.53
SYNCRIP-202ENST00000369622 GPAA1O43292 621 aa18.33■□□□□ 0.53
SYNCRIP-202ENST00000369622 PHACTR2O75167 634 aa18.33■□□□□ 0.53
SYNCRIP-202ENST00000369622 ACTN2P35609 894 aa18.33■□□□□ 0.53
SYNCRIP-202ENST00000369622 ATL3Q6DD88 541 aa18.33■□□□□ 0.53
SYNCRIP-202ENST00000369622 KCNG4Q8TDN1 519 aa18.33■□□□□ 0.53
SYNCRIP-202ENST00000369622 ZSWIM4Q9H7M6 989 aa18.33■□□□□ 0.53
SYNCRIP-202ENST00000369622 RGPD5Q99666 1765 aa18.33■□□□□ 0.53
SYNCRIP-202ENST00000369622 LRRFIP1Q32MZ4 808 aaKnown RBP18.33■□□□□ 0.52
SYNCRIP-202ENST00000369622 STRN4Q9NRL3 753 aa18.33■□□□□ 0.52
SYNCRIP-202ENST00000369622 IBSPP21815 317 aaPredicted RBP18.33■□□□□ 0.52
SYNCRIP-202ENST00000369622 SFPQP23246 707 aaKnown RBP eCLIP18.33■□□□□ 0.52
SYNCRIP-202ENST00000369622 METTL24Q5JXM2 366 aa18.33■□□□□ 0.52
SYNCRIP-202ENST00000369622 NFXL1Q6ZNB6 911 aa18.33■□□□□ 0.52
SYNCRIP-202ENST00000369622 ZCRB1Q8TBF4 217 aaKnown RBP18.33■□□□□ 0.52
SYNCRIP-202ENST00000369622 MYL10Q9BUA6 226 aa18.33■□□□□ 0.52
SYNCRIP-202ENST00000369622 PLEKHG2Q9H7P9 1386 aa18.33■□□□□ 0.52
SYNCRIP-202ENST00000369622 C5P01031 1676 aa18.33■□□□□ 0.52
SYNCRIP-202ENST00000369622 USP54Q70EL1 1684 aa18.32■□□□□ 0.52
SYNCRIP-202ENST00000369622 MAGEA9P43362 315 aa18.32■□□□□ 0.52
SYNCRIP-202ENST00000369622 CARD10Q9BWT7 1032 aa18.32■□□□□ 0.52
SYNCRIP-202ENST00000369622 PFKFB1P16118 471 aa18.32■□□□□ 0.52
SYNCRIP-202ENST00000369622 IFIT5Q13325 482 aaKnown RBP18.32■□□□□ 0.52
SYNCRIP-202ENST00000369622 MCM6Q14566 821 aa18.32■□□□□ 0.52
SYNCRIP-202ENST00000369622 ANO1Q5XXA6 986 aa18.32■□□□□ 0.52
SYNCRIP-202ENST00000369622 NBPF11Q86T75 865 aa18.32■□□□□ 0.52
SYNCRIP-202ENST00000369622 CCDC82Q8N4S0 544 aa18.32■□□□□ 0.52
SYNCRIP-202ENST00000369622 GPR108Q9NPR9 543 aa18.32■□□□□ 0.52
SYNCRIP-202ENST00000369622 INCENPQ9NQS7 918 aa18.32■□□□□ 0.52
SYNCRIP-202ENST00000369622 PRDM11Q9NQV5 511 aa18.32■□□□□ 0.52
SYNCRIP-202ENST00000369622 ATP1A3P13637 1013 aa18.31■□□□□ 0.52
SYNCRIP-202ENST00000369622 TDO2P48775 406 aa18.31■□□□□ 0.52
SYNCRIP-202ENST00000369622 EVCP57679 992 aa18.31■□□□□ 0.52
SYNCRIP-202ENST00000369622 SLC9C2Q5TAH2 1124 aa18.31■□□□□ 0.52
SYNCRIP-202ENST00000369622 E4F1Q66K89 784 aaPredicted RBP18.31■□□□□ 0.52
SYNCRIP-202ENST00000369622 PPP1R13BQ96KQ4 1090 aa18.31■□□□□ 0.52
SYNCRIP-202ENST00000369622 ALG1Q9BT22 464 aa18.31■□□□□ 0.52
SYNCRIP-202ENST00000369622 HPS5Q9UPZ3 1129 aa18.31■□□□□ 0.52
SYNCRIP-202ENST00000369622 AKAP2Q9Y2D5 859 aa18.31■□□□□ 0.52
SYNCRIP-202ENST00000369622 MRC1P22897 1456 aa18.31■□□□□ 0.52
SYNCRIP-202ENST00000369622 SERPINC1P01008 464 aa18.31■□□□□ 0.52
SYNCRIP-202ENST00000369622 ANTXR2P58335 489 aa18.31■□□□□ 0.52
SYNCRIP-202ENST00000369622 SPECC1Q5M775 1068 aa18.31■□□□□ 0.52
SYNCRIP-202ENST00000369622 LDHAL6AQ6ZMR3 332 aa18.31■□□□□ 0.52
SYNCRIP-202ENST00000369622 FOXP2O15409 715 aa18.3■□□□□ 0.52
SYNCRIP-202ENST00000369622 WDHD1O75717 1129 aaPredicted RBP18.3■□□□□ 0.52
SYNCRIP-202ENST00000369622 SYKP43405 635 aa18.3■□□□□ 0.52
SYNCRIP-202ENST00000369622 GSDMDP57764 484 aa18.3■□□□□ 0.52
SYNCRIP-202ENST00000369622 GOLGA8FQ08AF8 430 aa18.3■□□□□ 0.52
SYNCRIP-202ENST00000369622 GOLGA8DPQ0D2H9 430 aa18.3■□□□□ 0.52
SYNCRIP-202ENST00000369622 MICALL1Q8N3F8 863 aa18.3■□□□□ 0.52
SYNCRIP-202ENST00000369622 APPBP2Q92624 585 aa18.3■□□□□ 0.52
SYNCRIP-202ENST00000369622 CLIC6Q96NY7 704 aa18.3■□□□□ 0.52
SYNCRIP-202ENST00000369622 CNNM1Q9NRU3 951 aa18.3■□□□□ 0.52
SYNCRIP-202ENST00000369622 C1orf167Q5SNV9 1468 aa18.3■□□□□ 0.52
SYNCRIP-202ENST00000369622 SLIT3O75094 1523 aa18.3■□□□□ 0.52
SYNCRIP-202ENST00000369622 B4E1Z4 1266 aa18.29■□□□□ 0.52
SYNCRIP-202ENST00000369622 NRDCO43847 1150 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms