RNA–Protein interactions for RNA: ENST00000366699.3

TRIM11-202, Transcript of tripartite motif containing 11, humanhuman

TSL 2 BASIC

Gene TRIM11, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-202ENST00000366699 SF3A1Q15459 793 aaKnown RBP20.3■□□□□ 0.84
TRIM11-202ENST00000366699 SYNE3Q6ZMZ3 975 aa20.3■□□□□ 0.84
TRIM11-202ENST00000366699 C11orf57Q6ZUT1 292 aaPredicted RBP20.3■□□□□ 0.84
TRIM11-202ENST00000366699 LINC00301Q8NCQ3 95 aa20.3■□□□□ 0.84
TRIM11-202ENST00000366699 POLR3EQ9NVU0 708 aa20.3■□□□□ 0.84
TRIM11-202ENST00000366699 MYO5AQ9Y4I1 1855 aaKnown RBP20.3■□□□□ 0.84
TRIM11-202ENST00000366699 ARAP2Q8WZ64 1704 aa20.3■□□□□ 0.84
TRIM11-202ENST00000366699 NUTM2BA6NNL0 878 aaPredicted RBP20.29■□□□□ 0.84
TRIM11-202ENST00000366699 NUTM2EB1AL46 878 aaPredicted RBP20.29■□□□□ 0.84
TRIM11-202ENST00000366699 MBD4O95243 580 aa20.29■□□□□ 0.84
TRIM11-202ENST00000366699 NUTM2AQ8IVF1 878 aaPredicted RBP20.29■□□□□ 0.84
TRIM11-202ENST00000366699 FMR1NBQ8N0W7 255 aaPredicted RBP20.29■□□□□ 0.84
TRIM11-202ENST00000366699 KRT23Q9C075 422 aa20.29■□□□□ 0.84
TRIM11-202ENST00000366699 BECN2A8MW95 431 aa20.29■□□□□ 0.84
TRIM11-202ENST00000366699 STK38Q15208 465 aa20.29■□□□□ 0.84
TRIM11-202ENST00000366699 NFXL1Q6ZNB6 911 aa20.29■□□□□ 0.84
TRIM11-202ENST00000366699 CYB5R4Q7L1T6 521 aa20.29■□□□□ 0.84
TRIM11-202ENST00000366699 NRAPQ86VF7 1730 aa20.29■□□□□ 0.84
TRIM11-202ENST00000366699 C4AP0C0L4 1744 aa20.28■□□□□ 0.84
TRIM11-202ENST00000366699 C4BP0C0L5 1744 aa20.28■□□□□ 0.84
TRIM11-202ENST00000366699 B4E1Z4 1266 aa20.28■□□□□ 0.84
TRIM11-202ENST00000366699 MRFAP1L1Q96HT8 127 aa20.28■□□□□ 0.84
TRIM11-202ENST00000366699 NAT10Q9H0A0 1025 aaKnown RBP20.28■□□□□ 0.84
TRIM11-202ENST00000366699 NRBP1Q9UHY1 535 aa20.28■□□□□ 0.84
TRIM11-202ENST00000366699 CICQ96RK0 1608 aaPredicted RBP20.28■□□□□ 0.84
TRIM11-202ENST00000366699 RREB1Q92766 1687 aa20.28■□□□□ 0.84
TRIM11-202ENST00000366699 CHRNDQ07001 517 aa20.28■□□□□ 0.84
TRIM11-202ENST00000366699 APOA5Q6Q788 366 aa20.28■□□□□ 0.84
TRIM11-202ENST00000366699 SGMS1Q86VZ5 419 aa20.28■□□□□ 0.84
TRIM11-202ENST00000366699 GNL3LQ9NVN8 582 aaKnown RBP20.28■□□□□ 0.84
TRIM11-202ENST00000366699 PNPLA7Q6ZV29 1317 aa20.28■□□□□ 0.84
TRIM11-202ENST00000366699 ZBTB43O43298 467 aa20.27■□□□□ 0.84
TRIM11-202ENST00000366699 LIFRP42702 1097 aa20.27■□□□□ 0.84
TRIM11-202ENST00000366699 TMEM67Q5HYA8 995 aa20.27■□□□□ 0.84
TRIM11-202ENST00000366699 OTUD7BQ6GQQ9 843 aa20.27■□□□□ 0.84
TRIM11-202ENST00000366699 CEP57L1Q8IYX8 460 aa20.27■□□□□ 0.84
TRIM11-202ENST00000366699 SDF4Q9BRK5 362 aa20.27■□□□□ 0.84
TRIM11-202ENST00000366699 LRP2BPQ9P2M1 347 aa20.27■□□□□ 0.84
TRIM11-202ENST00000366699 RGL2O15211 777 aa20.27■□□□□ 0.84
TRIM11-202ENST00000366699 POLR3DP05423 398 aaPredicted RBP20.27■□□□□ 0.84
TRIM11-202ENST00000366699 BCAMP50895 628 aa20.27■□□□□ 0.84
TRIM11-202ENST00000366699 MYSM1Q5VVJ2 828 aa20.27■□□□□ 0.84
TRIM11-202ENST00000366699 ZMYND15Q9H091 742 aa20.27■□□□□ 0.84
TRIM11-202ENST00000366699 MFSD6Q6ZSS7 791 aa20.26■□□□□ 0.83
TRIM11-202ENST00000366699 IGDCC4Q8TDY8 1250 aa20.26■□□□□ 0.83
TRIM11-202ENST00000366699 ARMT1Q9H993 441 aa20.26■□□□□ 0.83
TRIM11-202ENST00000366699 CLIC4Q9Y696 253 aa20.26■□□□□ 0.83
TRIM11-202ENST00000366699 SPTLC2O15270 562 aa20.26■□□□□ 0.83
TRIM11-202ENST00000366699 TDO2P48775 406 aa20.26■□□□□ 0.83
TRIM11-202ENST00000366699 SART3Q15020 963 aaKnown RBP20.26■□□□□ 0.83
TRIM11-202ENST00000366699 AKNAD1Q5T1N1 836 aa20.26■□□□□ 0.83
TRIM11-202ENST00000366699 RAB11FIP4Q86YS3 637 aa20.26■□□□□ 0.83
TRIM11-202ENST00000366699 ALG1Q9BT22 464 aa20.26■□□□□ 0.83
TRIM11-202ENST00000366699 NEDD4P46934 1319 aa20.26■□□□□ 0.83
TRIM11-202ENST00000366699 CCDC69A6NI79 296 aa20.25■□□□□ 0.83
TRIM11-202ENST00000366699 KIF23Q02241 960 aaPredicted RBP20.25■□□□□ 0.83
TRIM11-202ENST00000366699 LRMPQ12912 555 aa20.25■□□□□ 0.83
TRIM11-202ENST00000366699 TRIM29Q14134 588 aa20.25■□□□□ 0.83
TRIM11-202ENST00000366699 ANKRD18AQ8IVF6 992 aa20.25■□□□□ 0.83
TRIM11-202ENST00000366699 MTA3Q9BTC8 594 aa20.25■□□□□ 0.83
TRIM11-202ENST00000366699 EPB41L4AQ9HCS5 686 aaPredicted RBP20.25■□□□□ 0.83
TRIM11-202ENST00000366699 SLC12A7Q9Y666 1083 aa20.25■□□□□ 0.83
TRIM11-202ENST00000366699 A0A1B0GVL5 298 aa20.25■□□□□ 0.83
TRIM11-202ENST00000366699 RNF41Q9H4P4 317 aaPredicted RBP20.25■□□□□ 0.83
TRIM11-202ENST00000366699 LY9Q9HBG7 655 aa20.25■□□□□ 0.83
TRIM11-202ENST00000366699 SLC4A4Q9Y6R1 1079 aa20.25■□□□□ 0.83
TRIM11-202ENST00000366699 PHLPP1O60346 1717 aa20.25■□□□□ 0.83
TRIM11-202ENST00000366699 GOLGA8AA7E2F4 631 aa20.24■□□□□ 0.83
TRIM11-202ENST00000366699 GSG1L2A8MUP6 293 aa20.24■□□□□ 0.83
TRIM11-202ENST00000366699 SNAP23O00161 211 aa20.24■□□□□ 0.83
TRIM11-202ENST00000366699 IFIT3O14879 490 aaKnown RBP20.24■□□□□ 0.83
TRIM11-202ENST00000366699 NEMFO60524 1076 aa20.24■□□□□ 0.83
TRIM11-202ENST00000366699 NDUFA8P51970 172 aa20.24■□□□□ 0.83
TRIM11-202ENST00000366699 MICU3Q86XE3 530 aa20.24■□□□□ 0.83
TRIM11-202ENST00000366699 DHX40Q8IX18 779 aaKnown RBP20.24■□□□□ 0.83
TRIM11-202ENST00000366699 IARSP41252 1262 aaKnown RBP20.24■□□□□ 0.83
TRIM11-202ENST00000366699 GNL2Q13823 731 aaKnown RBP20.24■□□□□ 0.83
TRIM11-202ENST00000366699 ZRSR1Q15695 479 aaKnown RBP20.24■□□□□ 0.83
TRIM11-202ENST00000366699 STAG1Q8WVM7 1258 aa20.24■□□□□ 0.83
TRIM11-202ENST00000366699 WASF1Q92558 559 aa20.24■□□□□ 0.83
TRIM11-202ENST00000366699 SF3B3Q15393 1217 aaKnown RBP20.23■□□□□ 0.83
TRIM11-202ENST00000366699 TMTC2Q8N394 836 aa20.23■□□□□ 0.83
TRIM11-202ENST00000366699 ZSWIM5Q9P217 1185 aa20.23■□□□□ 0.83
TRIM11-202ENST00000366699 KIAA1468Q9P260 1216 aa20.23■□□□□ 0.83
TRIM11-202ENST00000366699 DENND2AQ9ULE3 1009 aa20.23■□□□□ 0.83
TRIM11-202ENST00000366699 ERICH2A1L162 156 aa20.23■□□□□ 0.83
TRIM11-202ENST00000366699 UBE4AQ14139 1066 aa20.23■□□□□ 0.83
TRIM11-202ENST00000366699 ANO1Q5XXA6 986 aa20.23■□□□□ 0.83
TRIM11-202ENST00000366699 CACTINQ8WUQ7 758 aaKnown RBP20.23■□□□□ 0.83
TRIM11-202ENST00000366699 PKNOX2Q96KN3 472 aa20.23■□□□□ 0.83
TRIM11-202ENST00000366699 CHD4Q14839 1912 aa20.22■□□□□ 0.83
TRIM11-202ENST00000366699 CTDSPL2Q05D32 466 aa20.22■□□□□ 0.83
TRIM11-202ENST00000366699 CAVIN4Q5BKX8 364 aa20.22■□□□□ 0.83
TRIM11-202ENST00000366699 JMYQ8N9B5 988 aa20.22■□□□□ 0.83
TRIM11-202ENST00000366699 BSDC1Q9NW68 430 aaPredicted RBP20.22■□□□□ 0.83
TRIM11-202ENST00000366699 CCDC144BQ3MJ40 725 aa20.22■□□□□ 0.83
TRIM11-202ENST00000366699 CCDC144CPQ8IYA2 1237 aa20.22■□□□□ 0.83
TRIM11-202ENST00000366699 LCORLQ8N3X6 602 aa20.22■□□□□ 0.83
TRIM11-202ENST00000366699 STK36Q9NRP7 1315 aa20.22■□□□□ 0.83
TRIM11-202ENST00000366699 KCNQ2O43526 872 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms