RNA–Protein interactions for RNA: ENST00000362058.2

CROCCP2-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 2

Gene CROCCP2, Length 2,029 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-201ENST00000362058 IGHMBP2P38935 993 aaKnown RBP28.2■■■□□ 2.11
CROCCP2-201ENST00000362058 IFNL3Q8IZI9 196 aa28.2■■■□□ 2.11
CROCCP2-201ENST00000362058 MRFAP1L1Q96HT8 127 aa28.2■■■□□ 2.11
CROCCP2-201ENST00000362058 PDCL3Q9H2J4 239 aa28.2■■■□□ 2.11
CROCCP2-201ENST00000362058 NEDD4P46934 1319 aa28.2■■■□□ 2.1
CROCCP2-201ENST00000362058 A0A1B0GVL5 298 aa28.19■■■□□ 2.1
CROCCP2-201ENST00000362058 GNAT2P19087 354 aa28.19■■■□□ 2.1
CROCCP2-201ENST00000362058 DDB1Q16531 1140 aa28.19■■■□□ 2.1
CROCCP2-201ENST00000362058 NFXL1Q6ZNB6 911 aa28.19■■■□□ 2.1
CROCCP2-201ENST00000362058 IGDCC4Q8TDY8 1250 aa28.19■■■□□ 2.1
CROCCP2-201ENST00000362058 MAP7D2Q96T17 732 aa28.19■■■□□ 2.1
CROCCP2-201ENST00000362058 DENND2AQ9ULE3 1009 aa28.19■■■□□ 2.1
CROCCP2-201ENST00000362058 KIF28PB7ZC32 967 aa28.19■■■□□ 2.1
CROCCP2-201ENST00000362058 MBD4O95243 580 aa28.19■■■□□ 2.1
CROCCP2-201ENST00000362058 LIFRP42702 1097 aa28.19■■■□□ 2.1
CROCCP2-201ENST00000362058 NDUFA8P51970 172 aa28.19■■■□□ 2.1
CROCCP2-201ENST00000362058 ZRSR1Q15695 479 aaKnown RBP28.18■■■□□ 2.1
CROCCP2-201ENST00000362058 TMEM67Q5HYA8 995 aa28.18■■■□□ 2.1
CROCCP2-201ENST00000362058 KRT23Q9C075 422 aa28.18■■■□□ 2.1
CROCCP2-201ENST00000362058 CAMTA2O94983 1202 aa28.18■■■□□ 2.1
CROCCP2-201ENST00000362058 NACAP1Q9BZK3 213 aa28.18■■■□□ 2.1
CROCCP2-201ENST00000362058 LY9Q9HBG7 655 aa28.18■■■□□ 2.1
CROCCP2-201ENST00000362058 NRAPQ86VF7 1730 aa28.17■■■□□ 2.1
CROCCP2-201ENST00000362058 SEC31BQ9NQW1 1179 aa28.17■■■□□ 2.1
CROCCP2-201ENST00000362058 GJB4Q9NTQ9 266 aa28.17■■■□□ 2.1
CROCCP2-201ENST00000362058 BCORQ6W2J9 1755 aa28.17■■■□□ 2.1
CROCCP2-201ENST00000362058 SPATA31A1Q5TZJ5 1347 aa28.17■■■□□ 2.1
CROCCP2-201ENST00000362058 FAM177BA6PVY3 158 aa28.16■■■□□ 2.1
CROCCP2-201ENST00000362058 GOLGA8AA7E2F4 631 aa28.16■■■□□ 2.1
CROCCP2-201ENST00000362058 CMA1P23946 247 aa28.16■■■□□ 2.1
CROCCP2-201ENST00000362058 CHAF1AQ13111 956 aaPredicted RBP28.16■■■□□ 2.1
CROCCP2-201ENST00000362058 MICU3Q86XE3 530 aa28.16■■■□□ 2.1
CROCCP2-201ENST00000362058 DHX40Q8IX18 779 aaKnown RBP28.16■■■□□ 2.1
CROCCP2-201ENST00000362058 EPB41L4AQ9HCS5 686 aaPredicted RBP28.16■■■□□ 2.1
CROCCP2-201ENST00000362058 MYH14Q7Z406 1995 aaKnown RBP28.16■■■□□ 2.1
CROCCP2-201ENST00000362058 LOC102724428A0A0B4J2F2 783 aa28.16■■■□□ 2.1
CROCCP2-201ENST00000362058 IARSP41252 1262 aaKnown RBP28.16■■■□□ 2.1
CROCCP2-201ENST00000362058 SIK1P57059 783 aa28.16■■■□□ 2.1
CROCCP2-201ENST00000362058 TRIM29Q14134 588 aa28.16■■■□□ 2.1
CROCCP2-201ENST00000362058 SLC39A14Q15043 492 aa28.16■■■□□ 2.1
CROCCP2-201ENST00000362058 KRT40Q6A162 431 aa28.16■■■□□ 2.1
CROCCP2-201ENST00000362058 KIAA1468Q9P260 1216 aa28.16■■■□□ 2.1
CROCCP2-201ENST00000362058 NRBP1Q9UHY1 535 aa28.16■■■□□ 2.1
CROCCP2-201ENST00000362058 PNPLA7Q6ZV29 1317 aa28.15■■■□□ 2.1
CROCCP2-201ENST00000362058 A0A0G2JS52 829 aa28.15■■■□□ 2.1
CROCCP2-201ENST00000362058 CDC27P30260 824 aa28.15■■■□□ 2.1
CROCCP2-201ENST00000362058 GNL2Q13823 731 aaKnown RBP28.15■■■□□ 2.1
CROCCP2-201ENST00000362058 AKNAD1Q5T1N1 836 aa28.15■■■□□ 2.1
CROCCP2-201ENST00000362058 MTERF4Q7Z6M4 381 aaKnown RBP28.15■■■□□ 2.1
CROCCP2-201ENST00000362058 JMYQ8N9B5 988 aa28.15■■■□□ 2.1
CROCCP2-201ENST00000362058 ARMT1Q9H993 441 aa28.15■■■□□ 2.1
CROCCP2-201ENST00000362058 STK36Q9NRP7 1315 aa28.15■■■□□ 2.1
CROCCP2-201ENST00000362058 GTF2F1P35269 517 aaKnown RBP eCLIP28.14■■■□□ 2.12e-6■□□□□ 8.6
CROCCP2-201ENST00000362058 VPS37DQ86XT2 251 aa28.14■■■□□ 2.1
CROCCP2-201ENST00000362058 NKX2-3Q8TAU0 364 aa28.14■■■□□ 2.1
CROCCP2-201ENST00000362058 FAM13BQ9NYF5 915 aa28.14■■■□□ 2.1
CROCCP2-201ENST00000362058 SLC12A7Q9Y666 1083 aa28.14■■■□□ 2.1
CROCCP2-201ENST00000362058 CCDC69A6NI79 296 aa28.14■■■□□ 2.09
CROCCP2-201ENST00000362058 IFIT3O14879 490 aaKnown RBP28.14■■■□□ 2.09
CROCCP2-201ENST00000362058 NEMFO60524 1076 aa28.14■■■□□ 2.09
CROCCP2-201ENST00000362058 NTSR2O95665 410 aa28.14■■■□□ 2.09
CROCCP2-201ENST00000362058 RBM10P98175 930 aaKnown RBP28.14■■■□□ 2.09
CROCCP2-201ENST00000362058 NTRK3Q16288 839 aa28.14■■■□□ 2.09
CROCCP2-201ENST00000362058 AXDND1Q5T1B0 1012 aaPredicted RBP28.14■■■□□ 2.09
CROCCP2-201ENST00000362058 MFSD6Q6ZSS7 791 aa28.14■■■□□ 2.09
CROCCP2-201ENST00000362058 NIP7Q9Y221 180 aaKnown RBP eCLIP28.14■■■□□ 2.09
CROCCP2-201ENST00000362058 GSG1L2A8MUP6 293 aa28.13■■■□□ 2.09
CROCCP2-201ENST00000362058 BPIFA3Q9BQP9 254 aa28.13■■■□□ 2.09
CROCCP2-201ENST00000362058 ZSWIM5Q9P217 1185 aa28.13■■■□□ 2.09
CROCCP2-201ENST00000362058 PPP6R2O75170 966 aa28.13■■■□□ 2.09
CROCCP2-201ENST00000362058 ZNF202O95125 648 aa28.13■■■□□ 2.09
CROCCP2-201ENST00000362058 RXRAP19793 462 aa28.13■■■□□ 2.09
CROCCP2-201ENST00000362058 CTDSPL2Q05D32 466 aa28.13■■■□□ 2.09
CROCCP2-201ENST00000362058 WASF1Q92558 559 aa28.13■■■□□ 2.09
CROCCP2-201ENST00000362058 MTA3Q9BTC8 594 aa28.13■■■□□ 2.09
CROCCP2-201ENST00000362058 SENP2Q9HC62 589 aa28.13■■■□□ 2.09
CROCCP2-201ENST00000362058 NID2Q14112 1375 aa28.12■■■□□ 2.09
CROCCP2-201ENST00000362058 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP28.12■■■□□ 2.09
CROCCP2-201ENST00000362058 SLC3A2P08195 630 aaKnown RBP28.12■■■□□ 2.09
CROCCP2-201ENST00000362058 SART3Q15020 963 aaKnown RBP28.12■■■□□ 2.09
CROCCP2-201ENST00000362058 STAG1Q8WVM7 1258 aa28.12■■■□□ 2.09
CROCCP2-201ENST00000362058 PHKBQ93100 1093 aa28.12■■■□□ 2.09
CROCCP2-201ENST00000362058 AIFM3Q96NN9 605 aa28.12■■■□□ 2.09
CROCCP2-201ENST00000362058 ZNF652Q9Y2D9 606 aa28.12■■■□□ 2.09
CROCCP2-201ENST00000362058 TDO2P48775 406 aa28.11■■■□□ 2.09
CROCCP2-201ENST00000362058 BCAMP50895 628 aa28.11■■■□□ 2.09
CROCCP2-201ENST00000362058 SSRP1Q08945 709 aaKnown RBP28.11■■■□□ 2.09
CROCCP2-201ENST00000362058 AOPEPQ8N6M6 819 aa28.11■■■□□ 2.09
CROCCP2-201ENST00000362058 ACSBG1Q96GR2 724 aa28.11■■■□□ 2.09
CROCCP2-201ENST00000362058 TIGD1Q96MW7 591 aa28.11■■■□□ 2.09
CROCCP2-201ENST00000362058 PFKFB1P16118 471 aa28.11■■■□□ 2.09
CROCCP2-201ENST00000362058 U2AF2P26368 475 aaKnown RBP eCLIP28.11■■■□□ 2.092e-16■□□□□ 10.2
CROCCP2-201ENST00000362058 RBM6P78332 1123 aaKnown RBP28.11■■■□□ 2.09
CROCCP2-201ENST00000362058 LRMPQ12912 555 aa28.11■■■□□ 2.09
CROCCP2-201ENST00000362058 CDC5LQ99459 802 aaKnown RBP28.11■■■□□ 2.09
CROCCP2-201ENST00000362058 SLC4A4Q9Y6R1 1079 aa28.11■■■□□ 2.09
CROCCP2-201ENST00000362058 SNAP23O00161 211 aa28.1■■■□□ 2.09
CROCCP2-201ENST00000362058 FAM217BQ9NTX9 383 aaPredicted RBP28.1■■■□□ 2.09
CROCCP2-201ENST00000362058 CHRNDQ07001 517 aa28.09■■■□□ 2.09
CROCCP2-201ENST00000362058 ITPK1Q13572 414 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms