RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 RNF113AO15541 343 aaKnown RBP16.7■□□□□ 0.26
NSMCE1-201ENST00000361439 TNFAIP1Q13829 316 aa16.7■□□□□ 0.26
NSMCE1-201ENST00000361439 APOBEC3FQ8IUX4 373 aaKnown RBP16.7■□□□□ 0.26
NSMCE1-201ENST00000361439 TMOD2Q9NZR1 351 aa16.7■□□□□ 0.26
NSMCE1-201ENST00000361439 ZNF532Q9HCE3 1301 aa16.7■□□□□ 0.26
NSMCE1-201ENST00000361439 NPM3O75607 178 aaKnown RBP16.69■□□□□ 0.26
NSMCE1-201ENST00000361439 BTDP43251 543 aa16.69■□□□□ 0.26
NSMCE1-201ENST00000361439 BMP2KLQ5H9B9 411 aa16.69■□□□□ 0.26
NSMCE1-201ENST00000361439 CHADLQ6NUI6 762 aa16.69■□□□□ 0.26
NSMCE1-201ENST00000361439 SMC1BQ8NDV3 1235 aa16.69■□□□□ 0.26
NSMCE1-201ENST00000361439 ZNF70Q9UC06 446 aaPredicted RBP16.69■□□□□ 0.26
NSMCE1-201ENST00000361439 CLEC11AQ9Y240 323 aa16.69■□□□□ 0.26
NSMCE1-201ENST00000361439 PPP2R3BQ9Y5P8 575 aa16.69■□□□□ 0.26
NSMCE1-201ENST00000361439 GSPT1P15170 499 aaKnown RBP16.68■□□□□ 0.26
NSMCE1-201ENST00000361439 FSTL1Q12841 308 aa16.68■□□□□ 0.26
NSMCE1-201ENST00000361439 ANGEL2Q5VTE6 544 aaKnown RBP16.68■□□□□ 0.26
NSMCE1-201ENST00000361439 CDC42EP5Q6NZY7 148 aa16.68■□□□□ 0.26
NSMCE1-201ENST00000361439 CDC37L1Q7L3B6 337 aa16.68■□□□□ 0.26
NSMCE1-201ENST00000361439 APPBP2Q92624 585 aa16.68■□□□□ 0.26
NSMCE1-201ENST00000361439 RILPL2Q969X0 211 aa16.68■□□□□ 0.26
NSMCE1-201ENST00000361439 IDI2Q9BXS1 227 aa16.68■□□□□ 0.26
NSMCE1-201ENST00000361439 USP40Q9NVE5 1235 aa16.68■□□□□ 0.26
NSMCE1-201ENST00000361439 GGA3Q9NZ52 723 aa16.68■□□□□ 0.26
NSMCE1-201ENST00000361439 MYH2Q9UKX2 1941 aa16.68■□□□□ 0.26
NSMCE1-201ENST00000361439 TNNI2P48788 182 aa16.67■□□□□ 0.26
NSMCE1-201ENST00000361439 RHBDL3P58872 404 aa16.67■□□□□ 0.26
NSMCE1-201ENST00000361439 ADGRA1Q86SQ6 560 aa16.67■□□□□ 0.26
NSMCE1-201ENST00000361439 FAM83AQ86UY5 434 aa16.67■□□□□ 0.26
NSMCE1-201ENST00000361439 SULF1Q8IWU6 871 aa16.67■□□□□ 0.26
NSMCE1-201ENST00000361439 TDRD3Q9H7E2 651 aaKnown RBP16.67■□□□□ 0.26
NSMCE1-201ENST00000361439 PCDHAC2Q9Y5I4 1007 aa16.67■□□□□ 0.26
NSMCE1-201ENST00000361439 GTF3C3Q9Y5Q9 886 aa16.67■□□□□ 0.26
NSMCE1-201ENST00000361439 MAGEB6P1A0A0J9YX57 407 aa16.66■□□□□ 0.26
NSMCE1-201ENST00000361439 POTEIP0CG38 1075 aa16.66■□□□□ 0.26
NSMCE1-201ENST00000361439 POTEJP0CG39 1038 aa16.66■□□□□ 0.26
NSMCE1-201ENST00000361439 SDSP20132 328 aa16.66■□□□□ 0.26
NSMCE1-201ENST00000361439 RGS3P49796 1198 aa16.66■□□□□ 0.26
NSMCE1-201ENST00000361439 ZMYM1Q5SVZ6 1142 aa16.66■□□□□ 0.26
NSMCE1-201ENST00000361439 KRT26Q7Z3Y9 468 aa16.66■□□□□ 0.26
NSMCE1-201ENST00000361439 RIOK1Q9BRS2 568 aaKnown RBP16.66■□□□□ 0.26
NSMCE1-201ENST00000361439 HELLSQ9NRZ9 838 aa16.66■□□□□ 0.26
NSMCE1-201ENST00000361439 AATFQ9NY61 560 aaKnown RBP eCLIP16.66■□□□□ 0.26
NSMCE1-201ENST00000361439 ENTPD3O75355 529 aa16.65■□□□□ 0.26
NSMCE1-201ENST00000361439 AIDAQ96BJ3 306 aa16.65■□□□□ 0.26
NSMCE1-201ENST00000361439 ECM29Q5VYK3 1845 aa16.65■□□□□ 0.26
NSMCE1-201ENST00000361439 MYO5AQ9Y4I1 1855 aaKnown RBP16.65■□□□□ 0.26
NSMCE1-201ENST00000361439 CLRN2A0PK11 232 aa16.64■□□□□ 0.25
NSMCE1-201ENST00000361439 WDHD1O75717 1129 aaPredicted RBP16.64■□□□□ 0.25
NSMCE1-201ENST00000361439 GNAT2P19087 354 aa16.64■□□□□ 0.25
NSMCE1-201ENST00000361439 MIGA1Q8NAN2 632 aa16.64■□□□□ 0.25
NSMCE1-201ENST00000361439 CRNKL1Q9BZJ0 848 aaKnown RBP16.64■□□□□ 0.25
NSMCE1-201ENST00000361439 DEFB129Q9H1M3 183 aa16.64■□□□□ 0.25
NSMCE1-201ENST00000361439 VEZTQ9HBM0 779 aa16.64■□□□□ 0.25
NSMCE1-201ENST00000361439 RPAP1Q9BWH6 1393 aaPredicted RBP16.64■□□□□ 0.25
NSMCE1-201ENST00000361439 MYH7P12883 1935 aa16.63■□□□□ 0.25
NSMCE1-201ENST00000361439 MFAP1P55081 439 aaKnown RBP16.63■□□□□ 0.25
NSMCE1-201ENST00000361439 MAP1SQ66K74 1059 aaPredicted RBP16.63■□□□□ 0.25
NSMCE1-201ENST00000361439 TEX11Q8IYF3 940 aa16.63■□□□□ 0.25
NSMCE1-201ENST00000361439 FAM151AQ8WW52 585 aa16.63■□□□□ 0.25
NSMCE1-201ENST00000361439 OSBP2Q969R2 916 aa16.63■□□□□ 0.25
NSMCE1-201ENST00000361439 HOOK2Q96ED9 719 aa16.63■□□□□ 0.25
NSMCE1-201ENST00000361439 PUS7LQ9H0K6 701 aaKnown RBP16.63■□□□□ 0.25
NSMCE1-201ENST00000361439 ASTN2O75129 1339 aaPredicted RBP16.63■□□□□ 0.25
NSMCE1-201ENST00000361439 COL2A1P02458 1487 aaPredicted RBP16.62■□□□□ 0.25
NSMCE1-201ENST00000361439 MBD4O95243 580 aa16.62■□□□□ 0.25
NSMCE1-201ENST00000361439 ITGBL1O95965 494 aaPredicted RBP16.62■□□□□ 0.25
NSMCE1-201ENST00000361439 MCMDC2Q4G0Z9 681 aa16.62■□□□□ 0.25
NSMCE1-201ENST00000361439 USP48Q86UV5 1035 aa16.62■□□□□ 0.25
NSMCE1-201ENST00000361439 SH3RF3Q8TEJ3 882 aaPredicted RBP16.62■□□□□ 0.25
NSMCE1-201ENST00000361439 DHX36Q9H2U1 1008 aaKnown RBP16.62■□□□□ 0.25
NSMCE1-201ENST00000361439 DIAPH3Q9NSV4 1193 aa16.62■□□□□ 0.25
NSMCE1-201ENST00000361439 ATP8A2Q9NTI2 1148 aa16.62■□□□□ 0.25
NSMCE1-201ENST00000361439 TCP10L2B9ZVM9 353 aa16.61■□□□□ 0.25
NSMCE1-201ENST00000361439 DYNLL1P63167 89 aaKnown RBP16.61■□□□□ 0.25
NSMCE1-201ENST00000361439 RASA3Q14644 834 aa16.61■□□□□ 0.25
NSMCE1-201ENST00000361439 SUPT20HL1Q3ZLR7 823 aa16.61■□□□□ 0.25
NSMCE1-201ENST00000361439 GIMAP6Q6P9H5 292 aa16.61■□□□□ 0.25
NSMCE1-201ENST00000361439 RUFY2Q8WXA3 655 aa16.61■□□□□ 0.25
NSMCE1-201ENST00000361439 STRBPQ96SI9 672 aaKnown RBP16.61■□□□□ 0.25
NSMCE1-201ENST00000361439 FAM198AQ9UFP1 575 aa16.61■□□□□ 0.25
NSMCE1-201ENST00000361439 GPAA1O43292 621 aa16.6■□□□□ 0.25
NSMCE1-201ENST00000361439 CHGBP05060 677 aa16.6■□□□□ 0.25
NSMCE1-201ENST00000361439 NFIAQ12857 509 aa16.6■□□□□ 0.25
NSMCE1-201ENST00000361439 SKAP1Q86WV1 359 aa16.6■□□□□ 0.25
NSMCE1-201ENST00000361439 LCORLQ8N3X6 602 aa16.6■□□□□ 0.25
NSMCE1-201ENST00000361439 TGFBRAP1Q8WUH2 860 aa16.6■□□□□ 0.25
NSMCE1-201ENST00000361439 DDRGK1Q96HY6 314 aa16.6■□□□□ 0.25
NSMCE1-201ENST00000361439 GLIS2Q9BZE0 524 aaPredicted RBP16.6■□□□□ 0.25
NSMCE1-201ENST00000361439 OSBPL5Q9H0X9 879 aaPredicted RBP16.6■□□□□ 0.25
NSMCE1-201ENST00000361439 ARMT1Q9H993 441 aa16.6■□□□□ 0.25
NSMCE1-201ENST00000361439 TAOK2Q9UL54 1235 aa16.6■□□□□ 0.25
NSMCE1-201ENST00000361439 RAD50Q92878 1312 aa16.6■□□□□ 0.25
NSMCE1-201ENST00000361439 PASKQ96RG2 1323 aa16.6■□□□□ 0.25
NSMCE1-201ENST00000361439 CNTNAP1P78357 1384 aa16.6■□□□□ 0.25
NSMCE1-201ENST00000361439 ATRNL1Q5VV63 1379 aa16.6■□□□□ 0.25
NSMCE1-201ENST00000361439 CHMLP26374 656 aa16.59■□□□□ 0.25
NSMCE1-201ENST00000361439 NF2P35240 595 aa16.59■□□□□ 0.25
NSMCE1-201ENST00000361439 USP5P45974 858 aa16.59■□□□□ 0.25
NSMCE1-201ENST00000361439 CACNB3P54284 484 aa16.59■□□□□ 0.25
NSMCE1-201ENST00000361439 NMIQ13287 307 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms