RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 CTDNEP1O95476 244 aa14.49□□□□□ -0.09
UBA3-202ENST00000361055 PDE6BP35913 854 aa14.49□□□□□ -0.09
UBA3-202ENST00000361055 SMAP1Q8IYB5 467 aaPredicted RBP14.49□□□□□ -0.09
UBA3-202ENST00000361055 RPGRQ92834 1020 aaKnown RBP14.49□□□□□ -0.09
UBA3-202ENST00000361055 CHGBP05060 677 aa14.48□□□□□ -0.09
UBA3-202ENST00000361055 CCAR1Q8IX12 1150 aaKnown RBP14.48□□□□□ -0.09
UBA3-202ENST00000361055 TSC1Q92574 1164 aa14.48□□□□□ -0.09
UBA3-202ENST00000361055 COL4A1P02462 1669 aa14.48□□□□□ -0.09
UBA3-202ENST00000361055 CELF1Q92879 486 aaKnown RBP14.47□□□□□ -0.09
UBA3-202ENST00000361055 NEUROD6Q96NK8 337 aa14.47□□□□□ -0.09
UBA3-202ENST00000361055 LRRC2Q9BYS8 371 aa14.47□□□□□ -0.09
UBA3-202ENST00000361055 CEP126Q9P2H0 1117 aa14.47□□□□□ -0.09
UBA3-202ENST00000361055 NRBP1Q9UHY1 535 aa14.47□□□□□ -0.09
UBA3-202ENST00000361055 MROH5Q6ZUA9 1318 aa14.47□□□□□ -0.09
UBA3-202ENST00000361055 PTPDC1A2A3K4 754 aa14.47□□□□□ -0.09
UBA3-202ENST00000361055 E7EWF7 191 aa14.47□□□□□ -0.09
UBA3-202ENST00000361055 GOLGA6L19H0YKK7 550 aa14.47□□□□□ -0.09
UBA3-202ENST00000361055 GOLIM4O00461 696 aa14.47□□□□□ -0.09
UBA3-202ENST00000361055 NEMFO60524 1076 aa14.47□□□□□ -0.09
UBA3-202ENST00000361055 ZBTB7AO95365 584 aa14.47□□□□□ -0.09
UBA3-202ENST00000361055 HSPD1P10809 573 aaKnown RBP14.47□□□□□ -0.09
UBA3-202ENST00000361055 RPS8P62241 208 aaKnown RBP14.47□□□□□ -0.09
UBA3-202ENST00000361055 APOBRQ0VD83 1088 aa14.47□□□□□ -0.09
UBA3-202ENST00000361055 STX1AQ16623 288 aa14.47□□□□□ -0.09
UBA3-202ENST00000361055 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.47□□□□□ -0.09
UBA3-202ENST00000361055 MRFAP1L1Q96HT8 127 aa14.47□□□□□ -0.09
UBA3-202ENST00000361055 RBM17Q96I25 401 aaKnown RBP14.47□□□□□ -0.09
UBA3-202ENST00000361055 BSDC1Q9NW68 430 aaPredicted RBP14.47□□□□□ -0.09
UBA3-202ENST00000361055 CLIP2Q9UDT6 1046 aa14.47□□□□□ -0.09
UBA3-202ENST00000361055 RNF113AO15541 343 aaKnown RBP14.46□□□□□ -0.09
UBA3-202ENST00000361055 PDIA3P30101 505 aaKnown RBP14.46□□□□□ -0.09
UBA3-202ENST00000361055 EVCP57679 992 aa14.46□□□□□ -0.09
UBA3-202ENST00000361055 SNW1Q13573 536 aaKnown RBP14.46□□□□□ -0.09
UBA3-202ENST00000361055 GRAPQ13588 217 aa14.46□□□□□ -0.09
UBA3-202ENST00000361055 SYCP1Q15431 976 aa14.46□□□□□ -0.09
UBA3-202ENST00000361055 METTL24Q5JXM2 366 aa14.46□□□□□ -0.09
UBA3-202ENST00000361055 CCDC73Q6ZRK6 1079 aa14.46□□□□□ -0.09
UBA3-202ENST00000361055 ENGASEQ8NFI3 743 aa14.46□□□□□ -0.09
UBA3-202ENST00000361055 GRAPLQ8TC17 118 aaPredicted RBP14.46□□□□□ -0.09
UBA3-202ENST00000361055 A0A1B0GUL6 1792 aa14.46□□□□□ -0.09
UBA3-202ENST00000361055 SALL1Q9NSC2 1324 aa14.46□□□□□ -0.1
UBA3-202ENST00000361055 PSDA5PKW4 1024 aaPredicted RBP14.46□□□□□ -0.1
UBA3-202ENST00000361055 HOXA10P31260 410 aaPredicted RBP14.46□□□□□ -0.1
UBA3-202ENST00000361055 TIMM10P62072 90 aa14.46□□□□□ -0.1
UBA3-202ENST00000361055 LRMPQ12912 555 aa14.46□□□□□ -0.1
UBA3-202ENST00000361055 ANKRD7Q92527 254 aa14.46□□□□□ -0.1
UBA3-202ENST00000361055 AKAP2Q9Y2D5 859 aa14.46□□□□□ -0.1
UBA3-202ENST00000361055 PAXBP1Q9Y5B6 917 aa14.46□□□□□ -0.1
UBA3-202ENST00000361055 COL11A2P13942 1736 aaPredicted RBP14.45□□□□□ -0.1
UBA3-202ENST00000361055 POLD1P28340 1107 aa14.45□□□□□ -0.1
UBA3-202ENST00000361055 FAM160A1Q05DH4 1040 aa14.45□□□□□ -0.1
UBA3-202ENST00000361055 CACTINQ8WUQ7 758 aaKnown RBP14.45□□□□□ -0.1
UBA3-202ENST00000361055 CRAMP1Q96RY5 1269 aa14.45□□□□□ -0.1
UBA3-202ENST00000361055 ANO10Q9NW15 660 aa14.45□□□□□ -0.1
UBA3-202ENST00000361055 KIF13BQ9NQT8 1826 aa14.45□□□□□ -0.1
UBA3-202ENST00000361055 SMTNL1A8MU46 457 aa14.44□□□□□ -0.1
UBA3-202ENST00000361055 PDE8BO95263 885 aa14.44□□□□□ -0.1
UBA3-202ENST00000361055 SRGNP10124 158 aa14.44□□□□□ -0.1
UBA3-202ENST00000361055 CEBPZQ03701 1054 aaKnown RBP14.44□□□□□ -0.1
UBA3-202ENST00000361055 LRRFIP1Q32MZ4 808 aaKnown RBP14.44□□□□□ -0.1
UBA3-202ENST00000361055 USP28Q96RU2 1077 aa14.44□□□□□ -0.1
UBA3-202ENST00000361055 ATF5Q9Y2D1 282 aaPredicted RBP14.44□□□□□ -0.1
UBA3-202ENST00000361055 C10orf71Q711Q0 1435 aa14.44□□□□□ -0.1
UBA3-202ENST00000361055 KINO60870 393 aaKnown RBP14.44□□□□□ -0.1
UBA3-202ENST00000361055 IFIT1P09914 478 aaKnown RBP14.44□□□□□ -0.1
UBA3-202ENST00000361055 NPR1P16066 1061 aa14.44□□□□□ -0.1
UBA3-202ENST00000361055 CCT2P78371 535 aaKnown RBP14.44□□□□□ -0.1
UBA3-202ENST00000361055 VGLL2Q8N8G2 317 aa14.44□□□□□ -0.1
UBA3-202ENST00000361055 GOLPH3LQ9H4A5 285 aa14.44□□□□□ -0.1
UBA3-202ENST00000361055 CTNNA3Q9UI47 895 aa14.44□□□□□ -0.1
UBA3-202ENST00000361055 CHRNDQ07001 517 aa14.43□□□□□ -0.1
UBA3-202ENST00000361055 LRRC8AQ8IWT6 810 aa14.43□□□□□ -0.1
UBA3-202ENST00000361055 MASTLQ96GX5 879 aa14.43□□□□□ -0.1
UBA3-202ENST00000361055 PKNOX2Q96KN3 472 aa14.43□□□□□ -0.1
UBA3-202ENST00000361055 RTEL1Q9NZ71 1219 aa14.43□□□□□ -0.1
UBA3-202ENST00000361055 A0A1W2PQ27 194 aa14.43□□□□□ -0.1
UBA3-202ENST00000361055 A0A1W2PQ64 194 aa14.43□□□□□ -0.1
UBA3-202ENST00000361055 A0A1W2PQD8 194 aa14.43□□□□□ -0.1
UBA3-202ENST00000361055 H0YIN7 160 aa14.43□□□□□ -0.1
UBA3-202ENST00000361055 BBOX1O75936 387 aa14.43□□□□□ -0.1
UBA3-202ENST00000361055 TNNT1P13805 278 aa14.43□□□□□ -0.1
UBA3-202ENST00000361055 ALDH1B1P30837 517 aa14.43□□□□□ -0.1
UBA3-202ENST00000361055 ADALQ6DHV7 355 aa14.43□□□□□ -0.1
UBA3-202ENST00000361055 C11orf57Q6ZUT1 292 aaPredicted RBP14.43□□□□□ -0.1
UBA3-202ENST00000361055 PDCL2Q8N4E4 241 aa14.43□□□□□ -0.1
UBA3-202ENST00000361055 MINPP1Q9UNW1 487 aa14.43□□□□□ -0.1
UBA3-202ENST00000361055 CACNA1SQ13698 1873 aa14.43□□□□□ -0.1
UBA3-202ENST00000361055 A0A1B0GUL7 405 aa14.42□□□□□ -0.1
UBA3-202ENST00000361055 BECN2A8MW95 431 aa14.42□□□□□ -0.1
UBA3-202ENST00000361055 CCDC144BQ3MJ40 725 aa14.42□□□□□ -0.1
UBA3-202ENST00000361055 CCDC144CPQ8IYA2 1237 aa14.42□□□□□ -0.1
UBA3-202ENST00000361055 RGS22Q8NE09 1264 aa14.42□□□□□ -0.1
UBA3-202ENST00000361055 NAT10Q9H0A0 1025 aaKnown RBP14.42□□□□□ -0.1
UBA3-202ENST00000361055 MAST3O60307 1309 aa14.42□□□□□ -0.1
UBA3-202ENST00000361055 DLEC1Q9Y238 1755 aa14.42□□□□□ -0.1
UBA3-202ENST00000361055 ARAP2Q8WZ64 1704 aa14.42□□□□□ -0.1
UBA3-202ENST00000361055 ZFYP08048 801 aaPredicted RBP14.41□□□□□ -0.1
UBA3-202ENST00000361055 FDPSP14324 419 aaKnown RBP14.41□□□□□ -0.1
UBA3-202ENST00000361055 ME1P48163 572 aa14.41□□□□□ -0.1
UBA3-202ENST00000361055 PUM3Q15397 648 aaKnown RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms