RNA–Protein interactions for RNA: ENST00000359568.9

PCNT-201, Transcript of pericentrin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCNT, Length 10,560 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNT-201ENST00000359568 IRX5P78411 483 aaPredicted RBP11.78□□□□□ -0.52
PCNT-201ENST00000359568 CLUL1Q15846 466 aa11.78□□□□□ -0.52
PCNT-201ENST00000359568 ZBTB43O43298 467 aa11.78□□□□□ -0.52
PCNT-201ENST00000359568 MAP3K12Q12852 859 aa11.78□□□□□ -0.52
PCNT-201ENST00000359568 TRPC3Q13507 836 aa11.78□□□□□ -0.52
PCNT-201ENST00000359568 URB1O60287 2271 aaKnown RBP11.78□□□□□ -0.52
PCNT-201ENST00000359568 TERF2Q15554 542 aa11.78□□□□□ -0.52
PCNT-201ENST00000359568 ANKRD44Q8N8A2 993 aa11.78□□□□□ -0.52
PCNT-201ENST00000359568 THEGQ9P2T0 379 aa11.78□□□□□ -0.52
PCNT-201ENST00000359568 MMRN2Q9H8L6 949 aa11.78□□□□□ -0.52
PCNT-201ENST00000359568 DDX41Q9UJV9 622 aaKnown RBP11.78□□□□□ -0.52
PCNT-201ENST00000359568 RGS16O15492 202 aaPredicted RBP11.78□□□□□ -0.52
PCNT-201ENST00000359568 GJC1P36383 396 aa11.78□□□□□ -0.52
PCNT-201ENST00000359568 PDCD7Q8N8D1 485 aaKnown RBP11.78□□□□□ -0.52
PCNT-201ENST00000359568 PLEKHA4Q9H4M7 779 aa11.78□□□□□ -0.52
PCNT-201ENST00000359568 ARHGEF12Q9NZN5 1544 aa11.78□□□□□ -0.52
PCNT-201ENST00000359568 GUCY2FP51841 1108 aa11.78□□□□□ -0.52
PCNT-201ENST00000359568 MTX1Q13505 466 aa11.78□□□□□ -0.52
PCNT-201ENST00000359568 CFAP221Q4G0U5 840 aa11.78□□□□□ -0.52
PCNT-201ENST00000359568 UBL4BQ8N7F7 174 aa11.78□□□□□ -0.52
PCNT-201ENST00000359568 Q9H521 79 aa11.78□□□□□ -0.52
PCNT-201ENST00000359568 BCAS4Q8TDM0 211 aa11.78□□□□□ -0.52
PCNT-201ENST00000359568 SH3GL3Q99963 347 aa11.78□□□□□ -0.52
PCNT-201ENST00000359568 DESI2Q9BSY9 194 aa11.78□□□□□ -0.52
PCNT-201ENST00000359568 HDAC9Q9UKV0 1011 aa11.78□□□□□ -0.52
PCNT-201ENST00000359568 TTC41PQ6P2S7 1318 aa11.78□□□□□ -0.52
PCNT-201ENST00000359568 PNMA6AP0CW24 399 aaPredicted RBP11.78□□□□□ -0.52
PCNT-201ENST00000359568 RUFY3Q7L099 469 aa11.78□□□□□ -0.52
PCNT-201ENST00000359568 IFIH1Q9BYX4 1025 aaKnown RBP11.78□□□□□ -0.52
PCNT-201ENST00000359568 TROQ12816 1431 aaPredicted RBP11.78□□□□□ -0.52
PCNT-201ENST00000359568 RNASE9P60153 205 aaKnown RBP11.77□□□□□ -0.52
PCNT-201ENST00000359568 MAP3K21Q5TCX8 1036 aa11.77□□□□□ -0.52
PCNT-201ENST00000359568 A0A1B0GVL5 298 aa11.77□□□□□ -0.53
PCNT-201ENST00000359568 LRMPQ12912 555 aa11.77□□□□□ -0.53
PCNT-201ENST00000359568 PPP4R3AQ6IN85 833 aa11.77□□□□□ -0.53
PCNT-201ENST00000359568 TADA2BQ86TJ2 420 aa11.77□□□□□ -0.53
PCNT-201ENST00000359568 CCDC65Q8IXS2 484 aa11.77□□□□□ -0.53
PCNT-201ENST00000359568 POLR1AO95602 1720 aaPredicted RBP11.77□□□□□ -0.53
PCNT-201ENST00000359568 VIRMAQ69YN4 1812 aaKnown RBP11.77□□□□□ -0.53
PCNT-201ENST00000359568 GMNNO75496 209 aa11.77□□□□□ -0.53
PCNT-201ENST00000359568 SMC1BQ8NDV3 1235 aa11.77□□□□□ -0.53
PCNT-201ENST00000359568 ABTB1Q969K4 478 aaPredicted RBP11.77□□□□□ -0.53
PCNT-201ENST00000359568 CCDC85AQ96PX6 553 aaPredicted RBP11.77□□□□□ -0.53
PCNT-201ENST00000359568 DDX21Q9NR30 783 aaKnown RBP eCLIP11.77□□□□□ -0.53
PCNT-201ENST00000359568 KLHL14Q9P2G3 628 aa11.77□□□□□ -0.53
PCNT-201ENST00000359568 XPO4Q9C0E2 1151 aaKnown RBP11.77□□□□□ -0.53
PCNT-201ENST00000359568 SAR1BQ9Y6B6 198 aa11.77□□□□□ -0.53
PCNT-201ENST00000359568 SEC31AO94979 1220 aaKnown RBP11.77□□□□□ -0.53
PCNT-201ENST00000359568 E2F5Q15329 346 aa11.77□□□□□ -0.53
PCNT-201ENST00000359568 MGARPQ8TDB4 240 aa11.77□□□□□ -0.53
PCNT-201ENST00000359568 PPP1R9AQ9ULJ8 1098 aa11.76□□□□□ -0.53
PCNT-201ENST00000359568 PPFIA2O75334 1257 aa11.76□□□□□ -0.53
PCNT-201ENST00000359568 LOC102724159A0A0B4J2E5 919 aa11.76□□□□□ -0.53
PCNT-201ENST00000359568 PWP2Q15269 919 aaKnown RBP11.76□□□□□ -0.53
PCNT-201ENST00000359568 LEO1Q8WVC0 666 aaPredicted RBP11.76□□□□□ -0.53
PCNT-201ENST00000359568 HHATQ5VTY9 493 aa11.76□□□□□ -0.53
PCNT-201ENST00000359568 PTPDC1A2A3K4 754 aa11.76□□□□□ -0.53
PCNT-201ENST00000359568 GPT2Q8TD30 523 aa11.76□□□□□ -0.53
PCNT-201ENST00000359568 MSH6P52701 1360 aa11.76□□□□□ -0.53
PCNT-201ENST00000359568 ATP8B1O43520 1251 aa11.76□□□□□ -0.53
PCNT-201ENST00000359568 TRIM31Q9BZY9 425 aa11.76□□□□□ -0.53
PCNT-201ENST00000359568 DNAJC8O75937 253 aaPredicted RBP11.76□□□□□ -0.53
PCNT-201ENST00000359568 RAPGEF1Q13905 1077 aa11.76□□□□□ -0.53
PCNT-201ENST00000359568 RTL9Q8NET4 1388 aa11.76□□□□□ -0.53
PCNT-201ENST00000359568 UAP1Q16222 522 aaPredicted RBP11.76□□□□□ -0.53
PCNT-201ENST00000359568 NBPF6Q5VWK0 638 aa11.76□□□□□ -0.53
PCNT-201ENST00000359568 FBXO38Q6PIJ6 1188 aa11.76□□□□□ -0.53
PCNT-201ENST00000359568 NBPF5PQ86XG9 351 aaPredicted RBP11.76□□□□□ -0.53
PCNT-201ENST00000359568 JPH4Q96JJ6 628 aa11.76□□□□□ -0.53
PCNT-201ENST00000359568 NBPF4Q96M43 638 aa11.76□□□□□ -0.53
PCNT-201ENST00000359568 IRX4P78413 519 aa11.75□□□□□ -0.53
PCNT-201ENST00000359568 PYCARDQ9ULZ3 195 aa11.75□□□□□ -0.53
PCNT-201ENST00000359568 PRR16Q569H4 304 aa11.75□□□□□ -0.53
PCNT-201ENST00000359568 LRRC43Q8N309 656 aa11.75□□□□□ -0.53
PCNT-201ENST00000359568 CCDC197Q8NCU1 140 aa11.75□□□□□ -0.53
PCNT-201ENST00000359568 CUL5Q93034 780 aa11.75□□□□□ -0.53
PCNT-201ENST00000359568 ZC4H2Q9NQZ6 224 aa11.75□□□□□ -0.53
PCNT-201ENST00000359568 SOS1Q07889 1333 aaPredicted RBP11.75□□□□□ -0.53
PCNT-201ENST00000359568 RNF40O75150 1001 aa11.75□□□□□ -0.53
PCNT-201ENST00000359568 CTNNA1P35221 906 aaKnown RBP11.75□□□□□ -0.53
PCNT-201ENST00000359568 TAF7Q15545 349 aaPredicted RBP11.75□□□□□ -0.53
PCNT-201ENST00000359568 WTAPQ15007 396 aa11.75□□□□□ -0.53
PCNT-201ENST00000359568 RASIP1Q5U651 963 aa11.75□□□□□ -0.53
PCNT-201ENST00000359568 CREB3L3Q68CJ9 461 aa11.75□□□□□ -0.53
PCNT-201ENST00000359568 TSC22D3Q99576 134 aa11.75□□□□□ -0.53
PCNT-201ENST00000359568 CENPKQ9BS16 269 aa11.75□□□□□ -0.53
PCNT-201ENST00000359568 NLRP12P59046 1061 aa11.75□□□□□ -0.53
PCNT-201ENST00000359568 USP6NLQ92738 828 aa11.75□□□□□ -0.53
PCNT-201ENST00000359568 SATB2Q9UPW6 733 aa11.75□□□□□ -0.53
PCNT-201ENST00000359568 PPP2R2CQ9Y2T4 447 aa11.75□□□□□ -0.53
PCNT-201ENST00000359568 NMIQ13287 307 aaPredicted RBP11.75□□□□□ -0.53
PCNT-201ENST00000359568 TMED1Q13445 227 aa11.75□□□□□ -0.53
PCNT-201ENST00000359568 SLC24A3Q9HC58 644 aa11.75□□□□□ -0.53
PCNT-201ENST00000359568 CABP4P57796 275 aa11.75□□□□□ -0.53
PCNT-201ENST00000359568 PHLPP2Q6ZVD8 1323 aa11.75□□□□□ -0.53
PCNT-201ENST00000359568 IGHMBP2P38935 993 aaKnown RBP11.74□□□□□ -0.53
PCNT-201ENST00000359568 SF3A3Q12874 501 aaKnown RBP eCLIP11.74□□□□□ -0.532e-6■■■■□ 25.3
PCNT-201ENST00000359568 GAS2L3Q86XJ1 694 aa11.74□□□□□ -0.53
PCNT-201ENST00000359568 IQUBQ8NA54 791 aa11.74□□□□□ -0.53
PCNT-201ENST00000359568 NCAPGQ9BPX3 1015 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms