RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 EZH2Q15910 746 aaKnown RBP14.9□□□□□ -0.02
GGPS1-202ENST00000358966 MB21D2Q8IYB1 491 aaPredicted RBP14.9□□□□□ -0.02
GGPS1-202ENST00000358966 NAPBQ9H115 298 aa14.9□□□□□ -0.02
GGPS1-202ENST00000358966 CTNNA3Q9UI47 895 aa14.9□□□□□ -0.02
GGPS1-202ENST00000358966 CACNA1SQ13698 1873 aa14.9□□□□□ -0.02
GGPS1-202ENST00000358966 BAZ2AQ9UIF9 1905 aaKnown RBP14.89□□□□□ -0.03
GGPS1-202ENST00000358966 PLSCR1O15162 318 aa14.89□□□□□ -0.03
GGPS1-202ENST00000358966 CRY2Q49AN0 593 aa14.89□□□□□ -0.03
GGPS1-202ENST00000358966 RRP12Q5JTH9 1297 aaKnown RBP14.89□□□□□ -0.03
GGPS1-202ENST00000358966 CLEC17AQ6ZS10 378 aa14.89□□□□□ -0.03
GGPS1-202ENST00000358966 GRPEL1Q9HAV7 217 aa14.89□□□□□ -0.03
GGPS1-202ENST00000358966 RBM27Q9P2N5 1060 aaKnown RBP14.89□□□□□ -0.03
GGPS1-202ENST00000358966 PNPLA7Q6ZV29 1317 aa14.89□□□□□ -0.03
GGPS1-202ENST00000358966 KDM4AO75164 1064 aa14.89□□□□□ -0.03
GGPS1-202ENST00000358966 UFL1O94874 794 aa14.89□□□□□ -0.03
GGPS1-202ENST00000358966 TDO2P48775 406 aa14.89□□□□□ -0.03
GGPS1-202ENST00000358966 ANKRD2Q9GZV1 360 aa14.89□□□□□ -0.03
GGPS1-202ENST00000358966 MTMR6Q9Y217 621 aa14.89□□□□□ -0.03
GGPS1-202ENST00000358966 CNPY2Q9Y2B0 182 aa14.89□□□□□ -0.03
GGPS1-202ENST00000358966 WDR33Q9C0J8 1336 aaKnown RBP14.88□□□□□ -0.03
GGPS1-202ENST00000358966 IRS2Q9Y4H2 1338 aa14.88□□□□□ -0.03
GGPS1-202ENST00000358966 GOLGA6L22H0YM25 854 aa14.88□□□□□ -0.03
GGPS1-202ENST00000358966 ZSCAN22P10073 491 aaPredicted RBP14.88□□□□□ -0.03
GGPS1-202ENST00000358966 MECOMQ03112 1051 aa14.88□□□□□ -0.03
GGPS1-202ENST00000358966 LARP1BQ659C4 914 aaKnown RBP14.88□□□□□ -0.03
GGPS1-202ENST00000358966 RALYLQ86SE5 291 aaKnown RBP14.88□□□□□ -0.03
GGPS1-202ENST00000358966 GPT2Q8TD30 523 aa14.88□□□□□ -0.03
GGPS1-202ENST00000358966 ZKSCAN3Q9BRR0 538 aa14.88□□□□□ -0.03
GGPS1-202ENST00000358966 TOMM22Q9NS69 142 aa14.88□□□□□ -0.03
GGPS1-202ENST00000358966 AATFQ9NY61 560 aaKnown RBP eCLIP14.88□□□□□ -0.03
GGPS1-202ENST00000358966 KIF20AO95235 890 aa14.88□□□□□ -0.03
GGPS1-202ENST00000358966 CTDNEP1O95476 244 aa14.88□□□□□ -0.03
GGPS1-202ENST00000358966 TERF1P54274 439 aa14.88□□□□□ -0.03
GGPS1-202ENST00000358966 CCDC144CPQ8IYA2 1237 aa14.88□□□□□ -0.03
GGPS1-202ENST00000358966 MINDY4BA8MYZ0 360 aa14.87□□□□□ -0.03
GGPS1-202ENST00000358966 PATL2C9JE40 543 aaKnown RBP14.87□□□□□ -0.03
GGPS1-202ENST00000358966 GADD45BO75293 160 aaPredicted RBP14.87□□□□□ -0.03
GGPS1-202ENST00000358966 NAA16Q6N069 864 aaPredicted RBP14.87□□□□□ -0.03
GGPS1-202ENST00000358966 MTERF4Q7Z6M4 381 aaKnown RBP14.87□□□□□ -0.03
GGPS1-202ENST00000358966 MYL10Q9BUA6 226 aa14.87□□□□□ -0.03
GGPS1-202ENST00000358966 ZBTB22O15209 634 aa14.87□□□□□ -0.03
GGPS1-202ENST00000358966 F13A1P00488 732 aa14.87□□□□□ -0.03
GGPS1-202ENST00000358966 HMGB1P09429 215 aaKnown RBP14.87□□□□□ -0.03
GGPS1-202ENST00000358966 CHRM1P11229 460 aaPredicted RBP14.87□□□□□ -0.03
GGPS1-202ENST00000358966 PDIA3P30101 505 aaKnown RBP14.87□□□□□ -0.03
GGPS1-202ENST00000358966 DIXDC1Q155Q3 683 aa14.87□□□□□ -0.03
GGPS1-202ENST00000358966 NCOA7Q8NI08 942 aa14.87□□□□□ -0.03
GGPS1-202ENST00000358966 R3HCC1Q9Y3T6 440 aaKnown RBP14.87□□□□□ -0.03
GGPS1-202ENST00000358966 ANKRD31Q8N7Z5 1873 aa14.87□□□□□ -0.03
GGPS1-202ENST00000358966 MAGEB6P1A0A0J9YX57 407 aa14.86□□□□□ -0.03
GGPS1-202ENST00000358966 FIBPO43427 364 aa14.86□□□□□ -0.03
GGPS1-202ENST00000358966 CAVIN1Q6NZI2 390 aaKnown RBP14.86□□□□□ -0.03
GGPS1-202ENST00000358966 TICAM2Q86XR7 235 aa14.86□□□□□ -0.03
GGPS1-202ENST00000358966 NSUN4Q96CB9 384 aaKnown RBP14.86□□□□□ -0.03
GGPS1-202ENST00000358966 RIOK1Q9BRS2 568 aaKnown RBP14.86□□□□□ -0.03
GGPS1-202ENST00000358966 ALDH8A1Q9H2A2 487 aaPredicted RBP14.86□□□□□ -0.03
GGPS1-202ENST00000358966 ZNF219Q9P2Y4 722 aaPredicted RBP14.86□□□□□ -0.03
GGPS1-202ENST00000358966 POLLQ9UGP5 575 aa14.86□□□□□ -0.03
GGPS1-202ENST00000358966 XDHP47989 1333 aa14.86□□□□□ -0.03
GGPS1-202ENST00000358966 KLF18A0A0U1RQI7 1052 aa14.86□□□□□ -0.03
GGPS1-202ENST00000358966 GUCY1B3Q02153 619 aa14.86□□□□□ -0.03
GGPS1-202ENST00000358966 DNM1Q05193 864 aaKnown RBP14.86□□□□□ -0.03
GGPS1-202ENST00000358966 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.86□□□□□ -0.03
GGPS1-202ENST00000358966 DEFB132Q7Z7B7 95 aa14.86□□□□□ -0.03
GGPS1-202ENST00000358966 RIMBP2O15034 1052 aa14.86□□□□□ -0.03
GGPS1-202ENST00000358966 PRDM1O75626 825 aa14.86□□□□□ -0.03
GGPS1-202ENST00000358966 MCM5P33992 734 aa14.86□□□□□ -0.03
GGPS1-202ENST00000358966 AGXT2Q9BYV1 514 aa14.86□□□□□ -0.03
GGPS1-202ENST00000358966 GJB4Q9NTQ9 266 aa14.86□□□□□ -0.03
GGPS1-202ENST00000358966 TNS1Q9HBL0 1735 aaKnown RBP14.85□□□□□ -0.03
GGPS1-202ENST00000358966 GOLGA8BA8MQT2 603 aa14.85□□□□□ -0.03
GGPS1-202ENST00000358966 NSUN7Q8NE18 718 aaKnown RBP14.85□□□□□ -0.03
GGPS1-202ENST00000358966 PTPDC1A2A3K4 754 aa14.85□□□□□ -0.03
GGPS1-202ENST00000358966 C6orf229H3BNL8 230 aa14.85□□□□□ -0.03
GGPS1-202ENST00000358966 PFKFB2O60825 505 aa14.85□□□□□ -0.03
GGPS1-202ENST00000358966 RBM17Q96I25 401 aaKnown RBP14.85□□□□□ -0.03
GGPS1-202ENST00000358966 TRDNQ13061 729 aa14.84□□□□□ -0.03
GGPS1-202ENST00000358966 USP48Q86UV5 1035 aa14.84□□□□□ -0.03
GGPS1-202ENST00000358966 HPS5Q9UPZ3 1129 aa14.84□□□□□ -0.03
GGPS1-202ENST00000358966 CHD4Q14839 1912 aa14.84□□□□□ -0.03
GGPS1-202ENST00000358966 UBE2Q2LH0YL09 131 aa14.84□□□□□ -0.03
GGPS1-202ENST00000358966 CDK11BP21127 795 aaKnown RBP14.84□□□□□ -0.03
GGPS1-202ENST00000358966 OTUD7BQ6GQQ9 843 aa14.84□□□□□ -0.03
GGPS1-202ENST00000358966 GAS2L3Q86XJ1 694 aa14.84□□□□□ -0.03
GGPS1-202ENST00000358966 ZSWIM5Q9P217 1185 aa14.84□□□□□ -0.03
GGPS1-202ENST00000358966 UQCRHLA0A096LP55 91 aa14.83□□□□□ -0.04
GGPS1-202ENST00000358966 UQCRHP07919 91 aa14.83□□□□□ -0.04
GGPS1-202ENST00000358966 MAPK8IP2Q13387 824 aaPredicted RBP14.83□□□□□ -0.04
GGPS1-202ENST00000358966 MICU3Q86XE3 530 aa14.83□□□□□ -0.04
GGPS1-202ENST00000358966 CCDC94Q9BW85 323 aaPredicted RBP14.83□□□□□ -0.04
GGPS1-202ENST00000358966 CYP2D6P10635 497 aa14.83□□□□□ -0.04
GGPS1-202ENST00000358966 DZIP1Q86YF9 867 aaKnown RBP14.83□□□□□ -0.04
GGPS1-202ENST00000358966 NLGN1Q8N2Q7 840 aa14.83□□□□□ -0.04
GGPS1-202ENST00000358966 TBC1D16Q8TBP0 767 aa14.83□□□□□ -0.04
GGPS1-202ENST00000358966 GTPBP4Q9BZE4 634 aaKnown RBP14.83□□□□□ -0.04
GGPS1-202ENST00000358966 GGA1Q9UJY5 639 aa14.83□□□□□ -0.04
GGPS1-202ENST00000358966 PPEF1O14829 653 aaPredicted RBP14.82□□□□□ -0.04
GGPS1-202ENST00000358966 SRGNP10124 158 aa14.82□□□□□ -0.04
GGPS1-202ENST00000358966 LETM1O95202 739 aaPredicted RBP14.82□□□□□ -0.04
GGPS1-202ENST00000358966 CHRNA5P30532 468 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms