RNA–Protein interactions for RNA: ENST00000358918.7

APP-205, Transcript of amyloid beta precursor protein, humanhuman

TSL 5 BASIC

Gene APP, Length 2,366 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-205ENST00000358918 AGXT2Q9BYV1 514 aa16.52■□□□□ 0.24
APP-205ENST00000358918 YY1AP1Q9H869 796 aa16.52■□□□□ 0.24
APP-205ENST00000358918 VPS18Q9P253 973 aa16.52■□□□□ 0.24
APP-205ENST00000358918 MRC1P22897 1456 aa16.52■□□□□ 0.24
APP-205ENST00000358918 PDIA3P30101 505 aaKnown RBP16.52■□□□□ 0.23
APP-205ENST00000358918 GTF2A1P52655 376 aaPredicted RBP16.52■□□□□ 0.23
APP-205ENST00000358918 EXOSC10Q01780 885 aaKnown RBP16.52■□□□□ 0.23
APP-205ENST00000358918 KIFC2Q96AC6 838 aa16.52■□□□□ 0.23
APP-205ENST00000358918 DHX58Q96C10 678 aa16.52■□□□□ 0.23
APP-205ENST00000358918 PCDH11XQ9BZA7 1347 aa16.52■□□□□ 0.23
APP-205ENST00000358918 PCDH11YQ9BZA8 1340 aa16.52■□□□□ 0.23
APP-205ENST00000358918 A0A1B0GUL7 405 aa16.51■□□□□ 0.23
APP-205ENST00000358918 TMEM232C9JQI7 657 aa16.51■□□□□ 0.23
APP-205ENST00000358918 EIF3JO75822 258 aaKnown RBP16.51■□□□□ 0.23
APP-205ENST00000358918 POLR3DP05423 398 aaPredicted RBP16.51■□□□□ 0.23
APP-205ENST00000358918 CMA1P23946 247 aa16.51■□□□□ 0.23
APP-205ENST00000358918 OLFM4Q6UX06 510 aa16.51■□□□□ 0.23
APP-205ENST00000358918 SYNE3Q6ZMZ3 975 aa16.51■□□□□ 0.23
APP-205ENST00000358918 BRAPQ7Z569 592 aa16.51■□□□□ 0.23
APP-205ENST00000358918 KLHDC4Q8TBB5 520 aa16.51■□□□□ 0.23
APP-205ENST00000358918 C8orf76Q96K31 380 aa16.51■□□□□ 0.23
APP-205ENST00000358918 POTEB2H3BUK9 544 aa16.5■□□□□ 0.23
APP-205ENST00000358918 STX10O60499 249 aa16.5■□□□□ 0.23
APP-205ENST00000358918 IGKV5-2P06315 115 aa16.5■□□□□ 0.23
APP-205ENST00000358918 IL2RBP14784 551 aa16.5■□□□□ 0.23
APP-205ENST00000358918 MYSM1Q5VVJ2 828 aa16.5■□□□□ 0.23
APP-205ENST00000358918 ICE2Q659A1 982 aa16.5■□□□□ 0.23
APP-205ENST00000358918 HDXQ7Z353 690 aa16.5■□□□□ 0.23
APP-205ENST00000358918 HNRNPLLQ8WVV9 542 aaKnown RBP16.5■□□□□ 0.23
APP-205ENST00000358918 CARD10Q9BWT7 1032 aa16.5■□□□□ 0.23
APP-205ENST00000358918 PDE11AQ9HCR9 933 aa16.5■□□□□ 0.23
APP-205ENST00000358918 TUBE1Q9UJT0 475 aa16.5■□□□□ 0.23
APP-205ENST00000358918 FDPSP14324 419 aaKnown RBP16.5■□□□□ 0.23
APP-205ENST00000358918 CHMP4BP1P59074 171 aa16.5■□□□□ 0.23
APP-205ENST00000358918 PDILTQ8N807 584 aa16.5■□□□□ 0.23
APP-205ENST00000358918 CCDC12Q8WUD4 166 aaPredicted RBP16.5■□□□□ 0.23
APP-205ENST00000358918 ZFP91Q96JP5 570 aaPredicted RBP16.5■□□□□ 0.23
APP-205ENST00000358918 DBNLQ9UJU6 430 aaKnown RBP16.5■□□□□ 0.23
APP-205ENST00000358918 ERLIN1O75477 346 aa16.49■□□□□ 0.23
APP-205ENST00000358918 RPS6KA5O75582 802 aa16.49■□□□□ 0.23
APP-205ENST00000358918 CHGBP05060 677 aa16.49■□□□□ 0.23
APP-205ENST00000358918 TTC31Q49AM3 519 aaPredicted RBP16.49■□□□□ 0.23
APP-205ENST00000358918 OTUD7BQ6GQQ9 843 aa16.49■□□□□ 0.23
APP-205ENST00000358918 TOGARAM2Q6ZUX3 1019 aa16.49■□□□□ 0.23
APP-205ENST00000358918 NDUFB9Q9Y6M9 179 aa16.49■□□□□ 0.23
APP-205ENST00000358918 MAGEA9P43362 315 aa16.49■□□□□ 0.23
APP-205ENST00000358918 SYKP43405 635 aa16.49■□□□□ 0.23
APP-205ENST00000358918 MCM6Q14566 821 aa16.49■□□□□ 0.23
APP-205ENST00000358918 TNNI3KQ59H18 835 aa16.49■□□□□ 0.23
APP-205ENST00000358918 ANO1Q5XXA6 986 aa16.49■□□□□ 0.23
APP-205ENST00000358918 MYD88Q99836 296 aa16.49■□□□□ 0.23
APP-205ENST00000358918 FPGT-TNNI3KV9GXZ4 949 aa16.49■□□□□ 0.23
APP-205ENST00000358918 SH3TC1Q8TE82 1336 aa16.48■□□□□ 0.23
APP-205ENST00000358918 ABCA3Q99758 1704 aa16.48■□□□□ 0.23
APP-205ENST00000358918 NEXNQ0ZGT2 675 aa16.48■□□□□ 0.23
APP-205ENST00000358918 PTPN21Q16825 1174 aa16.48■□□□□ 0.23
APP-205ENST00000358918 AXDND1Q5T1B0 1012 aaPredicted RBP16.48■□□□□ 0.23
APP-205ENST00000358918 LRP10Q7Z4F1 713 aa16.48■□□□□ 0.23
APP-205ENST00000358918 SRGAP1Q7Z6B7 1085 aa16.48■□□□□ 0.23
APP-205ENST00000358918 E7EWF7 191 aa16.48■□□□□ 0.23
APP-205ENST00000358918 TBX2Q13207 712 aaPredicted RBP16.48■□□□□ 0.23
APP-205ENST00000358918 ANKRD13DQ6ZTN6 518 aa16.48■□□□□ 0.23
APP-205ENST00000358918 DDX46Q7L014 1031 aaKnown RBP16.48■□□□□ 0.23
APP-205ENST00000358918 MSL3Q8N5Y2 521 aaKnown RBP16.48■□□□□ 0.23
APP-205ENST00000358918 HAUS7Q99871 368 aa16.48■□□□□ 0.23
APP-205ENST00000358918 DSCC1Q9BVC3 393 aa16.48■□□□□ 0.23
APP-205ENST00000358918 FANCLQ9NW38 375 aa16.48■□□□□ 0.23
APP-205ENST00000358918 PARP4Q9UKK3 1724 aaKnown RBP16.48■□□□□ 0.23
APP-205ENST00000358918 MROH7-TTC4A0A0A0MT08 1334 aa16.47■□□□□ 0.23
APP-205ENST00000358918 NEURL1BA8MQ27 555 aa16.47■□□□□ 0.23
APP-205ENST00000358918 BEND6Q5SZJ8 279 aaPredicted RBP16.47■□□□□ 0.23
APP-205ENST00000358918 CEP112Q8N8E3 955 aa16.47■□□□□ 0.23
APP-205ENST00000358918 ZSWIM4Q9H7M6 989 aa16.47■□□□□ 0.23
APP-205ENST00000358918 MKRN1Q9UHC7 482 aaKnown RBP16.47■□□□□ 0.23
APP-205ENST00000358918 USP5P45974 858 aa16.46■□□□□ 0.23
APP-205ENST00000358918 KARSQ15046 597 aaKnown RBP16.46■□□□□ 0.23
APP-205ENST00000358918 ZBTB9Q96C00 473 aa16.46■□□□□ 0.23
APP-205ENST00000358918 METTL22Q9BUU2 404 aaPredicted RBP16.46■□□□□ 0.23
APP-205ENST00000358918 BRMS1Q9HCU9 246 aa16.46■□□□□ 0.23
APP-205ENST00000358918 INTS13Q9NVM9 706 aa16.46■□□□□ 0.23
APP-205ENST00000358918 CUTAO60888 179 aa16.46■□□□□ 0.23
APP-205ENST00000358918 CHST3Q7LGC8 479 aa16.46■□□□□ 0.23
APP-205ENST00000358918 KBTBD3Q8NAB2 608 aa16.46■□□□□ 0.23
APP-205ENST00000358918 TUBB4BP68371 445 aa16.45■□□□□ 0.22
APP-205ENST00000358918 TFCP2Q12800 502 aa16.45■□□□□ 0.22
APP-205ENST00000358918 PNOCQ13519 176 aa16.45■□□□□ 0.22
APP-205ENST00000358918 SPECC1LQ69YQ0 1117 aa16.45■□□□□ 0.22
APP-205ENST00000358918 TC2NQ8N9U0 490 aa16.45■□□□□ 0.22
APP-205ENST00000358918 ANKZF1Q9H8Y5 726 aa16.45■□□□□ 0.22
APP-205ENST00000358918 HELLSQ9NRZ9 838 aa16.45■□□□□ 0.22
APP-205ENST00000358918 GEMIN8Q9NWZ8 242 aaKnown RBP16.45■□□□□ 0.22
APP-205ENST00000358918 RAB21Q9UL25 225 aa16.45■□□□□ 0.22
APP-205ENST00000358918 FAN1Q9Y2M0 1017 aa16.45■□□□□ 0.22
APP-205ENST00000358918 NHSL1Q5SYE7 1610 aa16.45■□□□□ 0.22
APP-205ENST00000358918 ERVV-2B6SEH9 535 aa16.45■□□□□ 0.22
APP-205ENST00000358918 PTCD1O75127 700 aaKnown RBP16.45■□□□□ 0.22
APP-205ENST00000358918 WDHD1O75717 1129 aaPredicted RBP16.45■□□□□ 0.22
APP-205ENST00000358918 MARCKSP29966 332 aaPredicted RBP16.45■□□□□ 0.22
APP-205ENST00000358918 ADKP55263 362 aaKnown RBP16.45■□□□□ 0.22
APP-205ENST00000358918 GCKRQ14397 625 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms