RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 LUC7LQ9NQ29 371 aaKnown RBP13.96□□□□□ -0.17
SMAD9-201ENST00000350148 FMN2Q9NZ56 1722 aa13.96□□□□□ -0.18
SMAD9-201ENST00000350148 COL15A1P39059 1388 aa13.96□□□□□ -0.18
SMAD9-201ENST00000350148 UTYO14607 1347 aa13.96□□□□□ -0.18
SMAD9-201ENST00000350148 USP42Q9H9J4 1324 aaKnown RBP13.96□□□□□ -0.18
SMAD9-201ENST00000350148 RRP36Q96EU6 259 aaKnown RBP13.96□□□□□ -0.18
SMAD9-201ENST00000350148 PDCL3Q9H2J4 239 aa13.96□□□□□ -0.18
SMAD9-201ENST00000350148 KRT2P35908 639 aa13.95□□□□□ -0.18
SMAD9-201ENST00000350148 AKNAD1Q5T1N1 836 aa13.95□□□□□ -0.18
SMAD9-201ENST00000350148 SH2D4AQ9H788 454 aa13.95□□□□□ -0.18
SMAD9-201ENST00000350148 AFF2P51816 1311 aa13.95□□□□□ -0.18
SMAD9-201ENST00000350148 NEMFO60524 1076 aa13.95□□□□□ -0.18
SMAD9-201ENST00000350148 GNA11P29992 359 aa13.95□□□□□ -0.18
SMAD9-201ENST00000350148 CCDC144CPQ8IYA2 1237 aa13.95□□□□□ -0.18
SMAD9-201ENST00000350148 CCDC82Q8N4S0 544 aa13.95□□□□□ -0.18
SMAD9-201ENST00000350148 PDILTQ8N807 584 aa13.95□□□□□ -0.18
SMAD9-201ENST00000350148 SPATA31A5Q5VU36 1347 aa13.95□□□□□ -0.18
SMAD9-201ENST00000350148 SPATA31A7Q8IWB4 1347 aa13.95□□□□□ -0.18
SMAD9-201ENST00000350148 CBX1P83916 185 aa13.95□□□□□ -0.18
SMAD9-201ENST00000350148 RMND1Q9NWS8 449 aa13.95□□□□□ -0.18
SMAD9-201ENST00000350148 PIBF1Q8WXW3 757 aa13.95□□□□□ -0.18
SMAD9-201ENST00000350148 BSDC1Q9NW68 430 aaPredicted RBP13.95□□□□□ -0.18
SMAD9-201ENST00000350148 ZNF804BA4D1E1 1349 aa13.94□□□□□ -0.18
SMAD9-201ENST00000350148 HSPD1P10809 573 aaKnown RBP13.94□□□□□ -0.18
SMAD9-201ENST00000350148 TRIM75PA6NK02 468 aa13.94□□□□□ -0.18
SMAD9-201ENST00000350148 ZSCAN23Q3MJ62 389 aa13.94□□□□□ -0.18
SMAD9-201ENST00000350148 CNPY2Q9Y2B0 182 aa13.94□□□□□ -0.18
SMAD9-201ENST00000350148 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.94□□□□□ -0.18
SMAD9-201ENST00000350148 HOOK2Q96ED9 719 aa13.94□□□□□ -0.18
SMAD9-201ENST00000350148 GJD4Q96KN9 370 aaPredicted RBP13.94□□□□□ -0.18
SMAD9-201ENST00000350148 ZNF526Q8TF50 670 aaPredicted RBP13.94□□□□□ -0.18
SMAD9-201ENST00000350148 SPTLC2O15270 562 aa13.93□□□□□ -0.18
SMAD9-201ENST00000350148 B4E1Z4 1266 aa13.93□□□□□ -0.18
SMAD9-201ENST00000350148 FEZ1Q99689 392 aa13.93□□□□□ -0.18
SMAD9-201ENST00000350148 PUS3Q9BZE2 481 aaKnown RBP13.93□□□□□ -0.18
SMAD9-201ENST00000350148 H0YHG0 523 aa13.93□□□□□ -0.18
SMAD9-201ENST00000350148 RILPL1Q5EBL4 403 aa13.93□□□□□ -0.18
SMAD9-201ENST00000350148 CC2D2BQ6DHV5 1058 aa13.93□□□□□ -0.18
SMAD9-201ENST00000350148 TSG101Q99816 390 aa13.93□□□□□ -0.18
SMAD9-201ENST00000350148 SYKP43405 635 aa13.93□□□□□ -0.18
SMAD9-201ENST00000350148 CAMK4Q16566 473 aa13.93□□□□□ -0.18
SMAD9-201ENST00000350148 RIMBP2O15034 1052 aa13.93□□□□□ -0.18
SMAD9-201ENST00000350148 SUSD4Q5VX71 490 aa13.93□□□□□ -0.18
SMAD9-201ENST00000350148 GTF3C6Q969F1 213 aa13.93□□□□□ -0.18
SMAD9-201ENST00000350148 MED23Q9ULK4 1368 aa13.92□□□□□ -0.18
SMAD9-201ENST00000350148 PFKFB2O60825 505 aa13.92□□□□□ -0.18
SMAD9-201ENST00000350148 UBA7P41226 1012 aa13.92□□□□□ -0.18
SMAD9-201ENST00000350148 PTH1RQ03431 593 aa13.92□□□□□ -0.18
SMAD9-201ENST00000350148 DNM1Q05193 864 aaKnown RBP13.92□□□□□ -0.18
SMAD9-201ENST00000350148 IFNL3Q8IZI9 196 aa13.92□□□□□ -0.18
SMAD9-201ENST00000350148 ATP8A2Q9NTI2 1148 aa13.92□□□□□ -0.18
SMAD9-201ENST00000350148 SERPINB2P05120 415 aa13.92□□□□□ -0.18
SMAD9-201ENST00000350148 NBPF26B4DH59 902 aa13.92□□□□□ -0.18
SMAD9-201ENST00000350148 OFD1O75665 1012 aa13.92□□□□□ -0.18
SMAD9-201ENST00000350148 PARP1P09874 1014 aaKnown RBP13.92□□□□□ -0.18
SMAD9-201ENST00000350148 PPARAQ07869 468 aa13.92□□□□□ -0.18
SMAD9-201ENST00000350148 ERFEQ4G0M1 354 aa13.92□□□□□ -0.18
SMAD9-201ENST00000350148 NBPF10Q6P3W6 841 aaKnown RBP13.92□□□□□ -0.18
SMAD9-201ENST00000350148 NBPF15Q8N660 670 aa13.92□□□□□ -0.18
SMAD9-201ENST00000350148 ADD2P35612 726 aa13.92□□□□□ -0.18
SMAD9-201ENST00000350148 PICALMQ13492 652 aa13.92□□□□□ -0.18
SMAD9-201ENST00000350148 KDM4FA0A1W2PPD8 638 aa13.91□□□□□ -0.18
SMAD9-201ENST00000350148 KIF2AO00139 706 aaPredicted RBP13.91□□□□□ -0.18
SMAD9-201ENST00000350148 RGL2O15211 777 aa13.91□□□□□ -0.18
SMAD9-201ENST00000350148 ERMNQ8TAM6 284 aa13.91□□□□□ -0.18
SMAD9-201ENST00000350148 BRD1O95696 1058 aa13.91□□□□□ -0.18
SMAD9-201ENST00000350148 RBM6P78332 1123 aaKnown RBP13.91□□□□□ -0.18
SMAD9-201ENST00000350148 GRAPQ13588 217 aa13.91□□□□□ -0.18
SMAD9-201ENST00000350148 GRAPLQ8TC17 118 aaPredicted RBP13.91□□□□□ -0.18
SMAD9-201ENST00000350148 ZNF592Q92610 1267 aa13.91□□□□□ -0.18
SMAD9-201ENST00000350148 GDPD2Q9HCC8 539 aa13.91□□□□□ -0.18
SMAD9-201ENST00000350148 F8W031 263 aaPredicted RBP13.91□□□□□ -0.18
SMAD9-201ENST00000350148 WDHD1O75717 1129 aaPredicted RBP13.91□□□□□ -0.18
SMAD9-201ENST00000350148 PHKA1P46020 1223 aa13.91□□□□□ -0.18
SMAD9-201ENST00000350148 NAPAP54920 295 aa13.91□□□□□ -0.18
SMAD9-201ENST00000350148 GSDMDP57764 484 aa13.9□□□□□ -0.18
SMAD9-201ENST00000350148 GRIPAP1Q4V328 841 aa13.9□□□□□ -0.18
SMAD9-201ENST00000350148 ZSCAN30Q86W11 494 aa13.9□□□□□ -0.18
SMAD9-201ENST00000350148 ARGLU1Q9NWB6 273 aaPredicted RBP13.9□□□□□ -0.18
SMAD9-201ENST00000350148 MPHOSPH6Q99547 160 aaKnown RBP13.9□□□□□ -0.18
SMAD9-201ENST00000350148 TLR7Q9NYK1 1049 aaKnown RBP13.9□□□□□ -0.18
SMAD9-201ENST00000350148 BCAMP50895 628 aa13.9□□□□□ -0.18
SMAD9-201ENST00000350148 CARMIL3Q8ND23 1372 aa13.9□□□□□ -0.18
SMAD9-201ENST00000350148 PPP1R12BO60237 982 aaPredicted RBP13.9□□□□□ -0.18
SMAD9-201ENST00000350148 FAM114A1Q8IWE2 563 aa13.9□□□□□ -0.18
SMAD9-201ENST00000350148 SHPRHQ149N8 1683 aa13.9□□□□□ -0.18
SMAD9-201ENST00000350148 NRXN3Q9Y4C0 1643 aa13.89□□□□□ -0.19
SMAD9-201ENST00000350148 ADORA1P30542 326 aa13.89□□□□□ -0.19
SMAD9-201ENST00000350148 HLFQ16534 295 aa13.89□□□□□ -0.19
SMAD9-201ENST00000350148 RAB11FIP4Q86YS3 637 aa13.89□□□□□ -0.19
SMAD9-201ENST00000350148 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.89□□□□□ -0.19
SMAD9-201ENST00000350148 FOXO4P98177 505 aa13.89□□□□□ -0.19
SMAD9-201ENST00000350148 AATFQ9NY61 560 aaKnown RBP eCLIP13.89□□□□□ -0.19
SMAD9-201ENST00000350148 MEGF6O75095 1541 aa13.89□□□□□ -0.19
SMAD9-201ENST00000350148 XRN1Q8IZH2 1706 aaKnown RBP13.89□□□□□ -0.19
SMAD9-201ENST00000350148 AKAP12Q02952 1782 aa13.89□□□□□ -0.19
SMAD9-201ENST00000350148 CHST3Q7LGC8 479 aa13.89□□□□□ -0.19
SMAD9-201ENST00000350148 HEATR3Q7Z4Q2 680 aa13.89□□□□□ -0.19
SMAD9-201ENST00000350148 SSBP05455 408 aaKnown RBP eCLIP13.89□□□□□ -0.19
SMAD9-201ENST00000350148 CUL4AQ13619 759 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms