RNA–Protein interactions for RNA: ENST00000348547.6

ERGIC3-202, Transcript of ERGIC and golgi 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ERGIC3, Length 1,359 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-202ENST00000348547 EVX2Q03828 476 aa15.38■□□□□ 0.05
ERGIC3-202ENST00000348547 CDC42EP5Q6NZY7 148 aa15.38■□□□□ 0.05
ERGIC3-202ENST00000348547 SH3RF3Q8TEJ3 882 aaPredicted RBP15.38■□□□□ 0.05
ERGIC3-202ENST00000348547 APPBP2Q92624 585 aa15.38■□□□□ 0.05
ERGIC3-202ENST00000348547 TEKT1Q969V4 418 aa15.38■□□□□ 0.05
ERGIC3-202ENST00000348547 MRIQ9BWK5 157 aa15.38■□□□□ 0.05
ERGIC3-202ENST00000348547 TAF1DQ9H5J8 278 aaPredicted RBP15.38■□□□□ 0.05
ERGIC3-202ENST00000348547 ARMT1Q9H993 441 aa15.38■□□□□ 0.05
ERGIC3-202ENST00000348547 AATFQ9NY61 560 aaKnown RBP eCLIP15.38■□□□□ 0.05
ERGIC3-202ENST00000348547 SCAF8Q9UPN6 1271 aaKnown RBP15.38■□□□□ 0.05
ERGIC3-202ENST00000348547 SMIM22K7EJ46 135 aa15.37■□□□□ 0.05
ERGIC3-202ENST00000348547 PRKAB2O43741 272 aa15.37■□□□□ 0.05
ERGIC3-202ENST00000348547 WDHD1O75717 1129 aaPredicted RBP15.37■□□□□ 0.05
ERGIC3-202ENST00000348547 PPP4CP60510 307 aa15.37■□□□□ 0.05
ERGIC3-202ENST00000348547 NFIAQ12857 509 aa15.37■□□□□ 0.05
ERGIC3-202ENST00000348547 C8orf34Q49A92 452 aa15.37■□□□□ 0.05
ERGIC3-202ENST00000348547 RBM26Q5T8P6 1007 aaKnown RBP15.37■□□□□ 0.05
ERGIC3-202ENST00000348547 VPS53Q5VIR6 699 aa15.37■□□□□ 0.05
ERGIC3-202ENST00000348547 CWC27Q6UX04 472 aaKnown RBP15.37■□□□□ 0.05
ERGIC3-202ENST00000348547 DLK2Q6UY11 383 aa15.37■□□□□ 0.05
ERGIC3-202ENST00000348547 CDAN1Q8IWY9 1227 aa15.37■□□□□ 0.05
ERGIC3-202ENST00000348547 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.37■□□□□ 0.052e-6■■■□□ 14.9
ERGIC3-202ENST00000348547 DDX4Q9NQI0 724 aaKnown RBP15.37■□□□□ 0.05
ERGIC3-202ENST00000348547 CNTNAP1P78357 1384 aa15.37■□□□□ 0.05
ERGIC3-202ENST00000348547 CLRN2A0PK11 232 aa15.36■□□□□ 0.05
ERGIC3-202ENST00000348547 KIF4BQ2VIQ3 1234 aa15.36■□□□□ 0.05
ERGIC3-202ENST00000348547 DPY19L2Q6NUT2 758 aa15.36■□□□□ 0.05
ERGIC3-202ENST00000348547 ZFPM1Q8IX07 1006 aa15.36■□□□□ 0.05
ERGIC3-202ENST00000348547 STRBPQ96SI9 672 aaKnown RBP15.36■□□□□ 0.05
ERGIC3-202ENST00000348547 TDRD3Q9H7E2 651 aaKnown RBP15.36■□□□□ 0.05
ERGIC3-202ENST00000348547 CDC45O75419 566 aa15.36■□□□□ 0.05
ERGIC3-202ENST00000348547 ZFYP08048 801 aaPredicted RBP15.36■□□□□ 0.05
ERGIC3-202ENST00000348547 EPHX2P34913 555 aa15.36■□□□□ 0.05
ERGIC3-202ENST00000348547 SPDYE2Q495Y8 402 aa15.36■□□□□ 0.05
ERGIC3-202ENST00000348547 ESYT1Q9BSJ8 1104 aa15.36■□□□□ 0.05
ERGIC3-202ENST00000348547 RRAGCQ9HB90 399 aa15.36■□□□□ 0.05
ERGIC3-202ENST00000348547 EPB41L4AQ9HCS5 686 aaPredicted RBP15.36■□□□□ 0.05
ERGIC3-202ENST00000348547 ADARB2Q9NS39 739 aaKnown RBP15.36■□□□□ 0.05
ERGIC3-202ENST00000348547 FAM198AQ9UFP1 575 aa15.36■□□□□ 0.05
ERGIC3-202ENST00000348547 MKRN1Q9UHC7 482 aaKnown RBP15.36■□□□□ 0.05
ERGIC3-202ENST00000348547 HACL1Q9UJ83 578 aa15.36■□□□□ 0.05
ERGIC3-202ENST00000348547 PAPPA2Q9BXP8 1791 aa15.35■□□□□ 0.05
ERGIC3-202ENST00000348547 CEP350Q5VT06 3117 aa15.35■□□□□ 0.05
ERGIC3-202ENST00000348547 MAGEB6P1A0A0J9YX57 407 aa15.35■□□□□ 0.05
ERGIC3-202ENST00000348547 SGSM2O43147 1006 aa15.35■□□□□ 0.05
ERGIC3-202ENST00000348547 GPAA1O43292 621 aa15.35■□□□□ 0.05
ERGIC3-202ENST00000348547 SEC24BO95487 1268 aa15.35■□□□□ 0.05
ERGIC3-202ENST00000348547 GSTO1P78417 241 aa15.35■□□□□ 0.05
ERGIC3-202ENST00000348547 DLGAP5Q15398 846 aa15.35■□□□□ 0.05
ERGIC3-202ENST00000348547 TICAM2Q86XR7 235 aa15.35■□□□□ 0.05
ERGIC3-202ENST00000348547 OGFOD1Q8N543 542 aa15.35■□□□□ 0.05
ERGIC3-202ENST00000348547 DIAPH3Q9NSV4 1193 aa15.35■□□□□ 0.05
ERGIC3-202ENST00000348547 ZNF70Q9UC06 446 aaPredicted RBP15.35■□□□□ 0.05
ERGIC3-202ENST00000348547 PGAP2Q9UHJ9 254 aa15.35■□□□□ 0.05
ERGIC3-202ENST00000348547 SSC5DA1L4H1 1573 aa15.34■□□□□ 0.05
ERGIC3-202ENST00000348547 RPAP1Q9BWH6 1393 aaPredicted RBP15.34■□□□□ 0.05
ERGIC3-202ENST00000348547 H7C1D1 291 aa15.34■□□□□ 0.05
ERGIC3-202ENST00000348547 IGSF3O75054 1194 aa15.34■□□□□ 0.05
ERGIC3-202ENST00000348547 SLURP2P0DP57 97 aa15.34■□□□□ 0.05
ERGIC3-202ENST00000348547 RBM5P52756 815 aaKnown RBP eCLIP15.34■□□□□ 0.05
ERGIC3-202ENST00000348547 PTH1RQ03431 593 aa15.34■□□□□ 0.05
ERGIC3-202ENST00000348547 SDR42E1Q8WUS8 393 aa15.34■□□□□ 0.05
ERGIC3-202ENST00000348547 HELLSQ9NRZ9 838 aa15.34■□□□□ 0.05
ERGIC3-202ENST00000348547 USP40Q9NVE5 1235 aa15.34■□□□□ 0.05
ERGIC3-202ENST00000348547 HDAC9Q9UKV0 1011 aa15.34■□□□□ 0.05
ERGIC3-202ENST00000348547 CCDC171Q6TFL3 1326 aa15.33■□□□□ 0.04
ERGIC3-202ENST00000348547 GSG1L2A8MUP6 293 aa15.33■□□□□ 0.04
ERGIC3-202ENST00000348547 LDHCP07864 332 aa15.33■□□□□ 0.04
ERGIC3-202ENST00000348547 ZSCAN25Q6NSZ9 544 aa15.33■□□□□ 0.04
ERGIC3-202ENST00000348547 SH3BP5LQ7L8J4 393 aa15.33■□□□□ 0.04
ERGIC3-202ENST00000348547 GGA3Q9NZ52 723 aa15.33■□□□□ 0.04
ERGIC3-202ENST00000348547 TAF6LQ9Y6J9 622 aa15.33■□□□□ 0.04
ERGIC3-202ENST00000348547 FLT1P17948 1338 aa15.32■□□□□ 0.04
ERGIC3-202ENST00000348547 KIF3CO14782 793 aa15.32■□□□□ 0.04
ERGIC3-202ENST00000348547 LMOD1P29536 600 aaPredicted RBP15.32■□□□□ 0.04
ERGIC3-202ENST00000348547 MCMDC2Q4G0Z9 681 aa15.32■□□□□ 0.04
ERGIC3-202ENST00000348547 ANGEL2Q5VTE6 544 aaKnown RBP15.32■□□□□ 0.04
ERGIC3-202ENST00000348547 TMED8Q6PL24 325 aaPredicted RBP15.32■□□□□ 0.04
ERGIC3-202ENST00000348547 ATRNL1Q5VV63 1379 aa15.31■□□□□ 0.04
ERGIC3-202ENST00000348547 CYP2D7A0A087X1C5 515 aa15.31■□□□□ 0.04
ERGIC3-202ENST00000348547 CYP2D6P10635 497 aa15.31■□□□□ 0.04
ERGIC3-202ENST00000348547 VEGFAP15692 232 aaPredicted RBP15.31■□□□□ 0.04
ERGIC3-202ENST00000348547 MMP14P50281 582 aa15.31■□□□□ 0.04
ERGIC3-202ENST00000348547 MAPKAPK5Q8IW41 473 aa15.31■□□□□ 0.04
ERGIC3-202ENST00000348547 TEX11Q8IYF3 940 aa15.31■□□□□ 0.04
ERGIC3-202ENST00000348547 TEPSINQ96N21 525 aa15.31■□□□□ 0.04
ERGIC3-202ENST00000348547 LSG1Q9H089 658 aaKnown RBP15.31■□□□□ 0.04
ERGIC3-202ENST00000348547 NBPF3Q9H094 633 aa15.31■□□□□ 0.04
ERGIC3-202ENST00000348547 TACC3Q9Y6A5 838 aa15.31■□□□□ 0.04
ERGIC3-202ENST00000348547 OTOFQ9HC10 1997 aa15.31■□□□□ 0.04
ERGIC3-202ENST00000348547 RAD50Q92878 1312 aa15.3■□□□□ 0.04
ERGIC3-202ENST00000348547 IQCA1LA6NCM1 817 aa15.3■□□□□ 0.04
ERGIC3-202ENST00000348547 TCP10L2B9ZVM9 353 aa15.3■□□□□ 0.04
ERGIC3-202ENST00000348547 ADM5C9JUS6 153 aa15.3■□□□□ 0.04
ERGIC3-202ENST00000348547 FMR1Q06787 632 aaKnown RBP eCLIP15.3■□□□□ 0.04
ERGIC3-202ENST00000348547 USP50Q70EL3 339 aaPredicted RBP15.3■□□□□ 0.04
ERGIC3-202ENST00000348547 SLF2Q8IX21 1173 aa15.3■□□□□ 0.04
ERGIC3-202ENST00000348547 ZNF784Q8NCA9 323 aaPredicted RBP15.3■□□□□ 0.04
ERGIC3-202ENST00000348547 NKX2-3Q8TAU0 364 aa15.3■□□□□ 0.04
ERGIC3-202ENST00000348547 TGFBRAP1Q8WUH2 860 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms