RNA–Protein interactions for RNA: ENST00000335508.10

SF3B1-201, Transcript of splicing factor 3b subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B1, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-201ENST00000335508 GYG1P46976 350 aa7.89□□□□□ -1.15
SF3B1-201ENST00000335508 ARHGEF1Q92888 912 aaKnown RBP7.89□□□□□ -1.15
SF3B1-201ENST00000335508 CRAMP1Q96RY5 1269 aa7.89□□□□□ -1.15
SF3B1-201ENST00000335508 SUGT1Q9Y2Z0 365 aa7.89□□□□□ -1.15
SF3B1-201ENST00000335508 CSF1RP07333 972 aa7.89□□□□□ -1.15
SF3B1-201ENST00000335508 TTLL12Q14166 644 aaPredicted RBP7.89□□□□□ -1.15
SF3B1-201ENST00000335508 MRPS27Q92552 414 aaKnown RBP7.89□□□□□ -1.15
SF3B1-201ENST00000335508 PUS3Q9BZE2 481 aaKnown RBP7.89□□□□□ -1.15
SF3B1-201ENST00000335508 ARHGEF10LQ9HCE6 1279 aa7.89□□□□□ -1.15
SF3B1-201ENST00000335508 F13A1P00488 732 aa7.89□□□□□ -1.15
SF3B1-201ENST00000335508 GSPT1P15170 499 aaKnown RBP7.89□□□□□ -1.15
SF3B1-201ENST00000335508 SMARCE1Q969G3 411 aa7.89□□□□□ -1.15
SF3B1-201ENST00000335508 PCMTD1Q96MG8 357 aaPredicted RBP7.89□□□□□ -1.15
SF3B1-201ENST00000335508 RIMBP2O15034 1052 aa7.88□□□□□ -1.15
SF3B1-201ENST00000335508 NFIXQ14938 502 aa7.88□□□□□ -1.15
SF3B1-201ENST00000335508 CALML4Q96GE6 196 aa7.88□□□□□ -1.15
SF3B1-201ENST00000335508 EPHA10Q5JZY3 1008 aa7.88□□□□□ -1.15
SF3B1-201ENST00000335508 DGKHQ86XP1 1220 aa7.88□□□□□ -1.15
SF3B1-201ENST00000335508 SNX14Q9Y5W7 946 aa7.88□□□□□ -1.15
SF3B1-201ENST00000335508 FGAP02671 866 aa7.88□□□□□ -1.15
SF3B1-201ENST00000335508 SLC1A4P43007 532 aa7.88□□□□□ -1.15
SF3B1-201ENST00000335508 FAM182BQ5T319 152 aa7.88□□□□□ -1.15
SF3B1-201ENST00000335508 FOXP4Q8IVH2 680 aaPredicted RBP7.88□□□□□ -1.15
SF3B1-201ENST00000335508 IFNL3Q8IZI9 196 aa7.88□□□□□ -1.15
SF3B1-201ENST00000335508 SERPINB13Q9UIV8 391 aa7.88□□□□□ -1.15
SF3B1-201ENST00000335508 GPATCH4Q5T3I0 446 aaKnown RBP7.88□□□□□ -1.15
SF3B1-201ENST00000335508 FSIP1Q8NA03 581 aa7.88□□□□□ -1.15
SF3B1-201ENST00000335508 CHURC1Q8WUH1 139 aa7.88□□□□□ -1.15
SF3B1-201ENST00000335508 RCAN1P53805 252 aa7.88□□□□□ -1.15
SF3B1-201ENST00000335508 SLC10A5Q5PT55 438 aa7.88□□□□□ -1.15
SF3B1-201ENST00000335508 HOMER1Q86YM7 354 aa7.88□□□□□ -1.15
SF3B1-201ENST00000335508 FAM177A1Q8N128 213 aaPredicted RBP7.88□□□□□ -1.15
SF3B1-201ENST00000335508 RRP36Q96EU6 259 aaKnown RBP7.88□□□□□ -1.15
SF3B1-201ENST00000335508 SPDYE3A6NKU9 549 aa7.87□□□□□ -1.15
SF3B1-201ENST00000335508 SPTLC2O15270 562 aa7.87□□□□□ -1.15
SF3B1-201ENST00000335508 YEATS4O95619 227 aa7.87□□□□□ -1.15
SF3B1-201ENST00000335508 PPP1R2P41236 205 aa7.87□□□□□ -1.15
SF3B1-201ENST00000335508 HLFQ16534 295 aa7.87□□□□□ -1.15
SF3B1-201ENST00000335508 PDE4DIPQ5VU43 2346 aa7.87□□□□□ -1.15
SF3B1-201ENST00000335508 A0A0D9SFI3 127 aa7.87□□□□□ -1.15
SF3B1-201ENST00000335508 BRD2P25440 801 aaKnown RBP7.87□□□□□ -1.15
SF3B1-201ENST00000335508 BCAMP50895 628 aa7.87□□□□□ -1.15
SF3B1-201ENST00000335508 TFIP11Q9UBB9 837 aaKnown RBP7.87□□□□□ -1.15
SF3B1-201ENST00000335508 BCS1LQ9Y276 419 aa7.87□□□□□ -1.15
SF3B1-201ENST00000335508 UTYO14607 1347 aa7.87□□□□□ -1.15
SF3B1-201ENST00000335508 EPS15P42566 896 aa7.87□□□□□ -1.15
SF3B1-201ENST00000335508 ZNF165P49910 485 aa7.87□□□□□ -1.15
SF3B1-201ENST00000335508 NAPAP54920 295 aa7.87□□□□□ -1.15
SF3B1-201ENST00000335508 PICALMQ13492 652 aa7.87□□□□□ -1.15
SF3B1-201ENST00000335508 ALX1Q15699 326 aa7.87□□□□□ -1.15
SF3B1-201ENST00000335508 NECAB1Q8N987 351 aa7.87□□□□□ -1.15
SF3B1-201ENST00000335508 ARMT1Q9H993 441 aa7.87□□□□□ -1.15
SF3B1-201ENST00000335508 SEC31BQ9NQW1 1179 aa7.87□□□□□ -1.15
SF3B1-201ENST00000335508 B4E1Z4 1266 aa7.87□□□□□ -1.15
SF3B1-201ENST00000335508 PRDM1O75626 825 aa7.87□□□□□ -1.15
SF3B1-201ENST00000335508 CAMTA2O94983 1202 aa7.87□□□□□ -1.15
SF3B1-201ENST00000335508 TFAP4Q01664 338 aa7.87□□□□□ -1.15
SF3B1-201ENST00000335508 IQUBQ8NA54 791 aa7.87□□□□□ -1.15
SF3B1-201ENST00000335508 CNNM3Q8NE01 707 aa7.87□□□□□ -1.15
SF3B1-201ENST00000335508 LRRC2Q9BYS8 371 aa7.87□□□□□ -1.15
SF3B1-201ENST00000335508 ZSWIM6Q9HCJ5 1215 aa7.87□□□□□ -1.15
SF3B1-201ENST00000335508 SRP68Q9UHB9 627 aaKnown RBP7.87□□□□□ -1.15
SF3B1-201ENST00000335508 PLSCR1O15162 318 aa7.87□□□□□ -1.15
SF3B1-201ENST00000335508 CCDC70Q6NSX1 233 aa7.87□□□□□ -1.15
SF3B1-201ENST00000335508 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.86□□□□□ -1.15
SF3B1-201ENST00000335508 KRT79Q5XKE5 535 aa7.86□□□□□ -1.15
SF3B1-201ENST00000335508 DIS3L2Q8IYB7 885 aaKnown RBP7.86□□□□□ -1.15
SF3B1-201ENST00000335508 PARP1P09874 1014 aaKnown RBP7.86□□□□□ -1.15
SF3B1-201ENST00000335508 RASGRF1Q13972 1273 aa7.86□□□□□ -1.15
SF3B1-201ENST00000335508 RAB3GAP1Q15042 981 aa7.86□□□□□ -1.15
SF3B1-201ENST00000335508 WWC2Q6AWC2 1192 aa7.86□□□□□ -1.15
SF3B1-201ENST00000335508 GALNT17Q6IS24 598 aa7.86□□□□□ -1.15
SF3B1-201ENST00000335508 EDC3Q96F86 508 aaKnown RBP7.86□□□□□ -1.15
SF3B1-201ENST00000335508 CCDC173Q0VFZ6 552 aa7.86□□□□□ -1.15
SF3B1-201ENST00000335508 CETN1Q12798 172 aa7.86□□□□□ -1.15
SF3B1-201ENST00000335508 ZNF512BQ96KM6 892 aaPredicted RBP7.86□□□□□ -1.15
SF3B1-201ENST00000335508 E7EWF7 191 aa7.86□□□□□ -1.15
SF3B1-201ENST00000335508 CYP21A2P08686 494 aa7.86□□□□□ -1.15
SF3B1-201ENST00000335508 IDEP14735 1019 aa7.86□□□□□ -1.15
SF3B1-201ENST00000335508 WDR78Q5VTH9 848 aa7.86□□□□□ -1.15
SF3B1-201ENST00000335508 KANSL2Q9H9L4 492 aa7.86□□□□□ -1.15
SF3B1-201ENST00000335508 POLR1AO95602 1720 aaPredicted RBP7.86□□□□□ -1.15
SF3B1-201ENST00000335508 KIF2AO00139 706 aaPredicted RBP7.86□□□□□ -1.15
SF3B1-201ENST00000335508 SERPINC1P01008 464 aa7.86□□□□□ -1.15
SF3B1-201ENST00000335508 ADD2P35612 726 aa7.86□□□□□ -1.15
SF3B1-201ENST00000335508 ERFEQ4G0M1 354 aa7.86□□□□□ -1.15
SF3B1-201ENST00000335508 USP37Q86T82 979 aa7.86□□□□□ -1.15
SF3B1-201ENST00000335508 SP8Q8IXZ3 490 aa7.86□□□□□ -1.15
SF3B1-201ENST00000335508 RMND1Q9NWS8 449 aa7.86□□□□□ -1.15
SF3B1-201ENST00000335508 PIM2Q9P1W9 311 aa7.86□□□□□ -1.15
SF3B1-201ENST00000335508 PPARAQ07869 468 aa7.86□□□□□ -1.15
SF3B1-201ENST00000335508 KRT25Q7Z3Z0 450 aa7.86□□□□□ -1.15
SF3B1-201ENST00000335508 CCDC24Q8N4L8 307 aa7.86□□□□□ -1.15
SF3B1-201ENST00000335508 FBXO18Q8NFZ0 1043 aa7.86□□□□□ -1.15
SF3B1-201ENST00000335508 SMARCC2Q8TAQ2 1214 aa7.86□□□□□ -1.15
SF3B1-201ENST00000335508 TTC14Q96N46 770 aa7.86□□□□□ -1.15
SF3B1-201ENST00000335508 KCNG1Q9UIX4 513 aa7.86□□□□□ -1.15
SF3B1-201ENST00000335508 MINPP1Q9UNW1 487 aa7.86□□□□□ -1.15
SF3B1-201ENST00000335508 USP42Q9H9J4 1324 aaKnown RBP7.85□□□□□ -1.15
SF3B1-201ENST00000335508 SYKP43405 635 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms