RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 ZRANB2O95218 330 aaKnown RBP eCLIP13.55□□□□□ -0.24
LIMK2-202ENST00000333611 INPP5BP32019 993 aa13.55□□□□□ -0.24
LIMK2-202ENST00000333611 AMOTQ4VCS5 1084 aa13.55□□□□□ -0.24
LIMK2-202ENST00000333611 CCDC158Q5M9N0 1113 aa13.55□□□□□ -0.24
LIMK2-202ENST00000333611 SCLT1Q96NL6 688 aa13.55□□□□□ -0.24
LIMK2-202ENST00000333611 ZBTB3Q9H5J0 574 aa13.55□□□□□ -0.24
LIMK2-202ENST00000333611 PCDHA7Q9UN72 937 aa13.55□□□□□ -0.24
LIMK2-202ENST00000333611 CLIC4Q9Y696 253 aa13.55□□□□□ -0.24
LIMK2-202ENST00000333611 CLNS1AP54105 237 aaKnown RBP13.55□□□□□ -0.24
LIMK2-202ENST00000333611 KIF4BQ2VIQ3 1234 aa13.55□□□□□ -0.24
LIMK2-202ENST00000333611 CPLX3Q8WVH0 158 aa13.55□□□□□ -0.24
LIMK2-202ENST00000333611 IRF6O14896 467 aa13.55□□□□□ -0.24
LIMK2-202ENST00000333611 TADA3O75528 432 aa13.55□□□□□ -0.24
LIMK2-202ENST00000333611 SLC3A2P08195 630 aaKnown RBP13.55□□□□□ -0.24
LIMK2-202ENST00000333611 IFIT1P09914 478 aaKnown RBP13.55□□□□□ -0.24
LIMK2-202ENST00000333611 MAP2K1Q02750 393 aaPredicted RBP13.55□□□□□ -0.24
LIMK2-202ENST00000333611 ZNF790Q6PG37 636 aa13.55□□□□□ -0.24
LIMK2-202ENST00000333611 EFCAB13Q8IY85 973 aa13.55□□□□□ -0.24
LIMK2-202ENST00000333611 THEMISQ8N1K5 641 aaPredicted RBP13.55□□□□□ -0.24
LIMK2-202ENST00000333611 KCNB2Q92953 911 aa13.55□□□□□ -0.24
LIMK2-202ENST00000333611 NPHP4O75161 1426 aaPredicted RBP13.55□□□□□ -0.24
LIMK2-202ENST00000333611 COL15A1P39059 1388 aa13.54□□□□□ -0.24
LIMK2-202ENST00000333611 SPATA31D1Q6ZQQ2 1576 aa13.54□□□□□ -0.24
LIMK2-202ENST00000333611 EFCAB8A8MWE9 144 aa13.54□□□□□ -0.24
LIMK2-202ENST00000333611 CTAGE5O15320 804 aa13.54□□□□□ -0.24
LIMK2-202ENST00000333611 CORO7P57737 925 aa13.54□□□□□ -0.24
LIMK2-202ENST00000333611 PTPN12Q05209 780 aaKnown RBP13.54□□□□□ -0.24
LIMK2-202ENST00000333611 E2F5Q15329 346 aa13.54□□□□□ -0.24
LIMK2-202ENST00000333611 CD248Q9HCU0 757 aa13.54□□□□□ -0.24
LIMK2-202ENST00000333611 PAG1Q9NWQ8 432 aa13.54□□□□□ -0.24
LIMK2-202ENST00000333611 TBX22Q9Y458 520 aa13.54□□□□□ -0.24
LIMK2-202ENST00000333611 PXDNLA1KZ92 1463 aa13.54□□□□□ -0.24
LIMK2-202ENST00000333611 KLF18A0A0U1RQI7 1052 aa13.54□□□□□ -0.24
LIMK2-202ENST00000333611 ATP5JP18859 108 aa13.54□□□□□ -0.24
LIMK2-202ENST00000333611 HNRNPH1P31943 449 aaKnown RBP13.54□□□□□ -0.24
LIMK2-202ENST00000333611 AKAP12Q02952 1782 aa13.54□□□□□ -0.24
LIMK2-202ENST00000333611 XRN1Q8IZH2 1706 aaKnown RBP13.54□□□□□ -0.24
LIMK2-202ENST00000333611 E7EWF7 191 aa13.54□□□□□ -0.24
LIMK2-202ENST00000333611 CTDNEP1O95476 244 aa13.54□□□□□ -0.24
LIMK2-202ENST00000333611 CPLX2Q6PUV4 134 aaKnown RBP13.54□□□□□ -0.24
LIMK2-202ENST00000333611 HDXQ7Z353 690 aa13.54□□□□□ -0.24
LIMK2-202ENST00000333611 RALYLQ86SE5 291 aaKnown RBP13.54□□□□□ -0.24
LIMK2-202ENST00000333611 DHX40Q8IX18 779 aaKnown RBP13.54□□□□□ -0.24
LIMK2-202ENST00000333611 CCDC82Q8N4S0 544 aa13.54□□□□□ -0.24
LIMK2-202ENST00000333611 AXIN2Q9Y2T1 843 aa13.54□□□□□ -0.24
LIMK2-202ENST00000333611 MED23Q9ULK4 1368 aa13.53□□□□□ -0.24
LIMK2-202ENST00000333611 ZNF609O15014 1411 aa13.53□□□□□ -0.24
LIMK2-202ENST00000333611 A0A087WUV0 522 aaPredicted RBP13.53□□□□□ -0.24
LIMK2-202ENST00000333611 GCKP35557 465 aa13.53□□□□□ -0.24
LIMK2-202ENST00000333611 SF3A3Q12874 501 aaKnown RBP eCLIP13.53□□□□□ -0.242e-6■■■□□ 16.4
LIMK2-202ENST00000333611 TSGA10IPQ3SY00 556 aa13.53□□□□□ -0.24
LIMK2-202ENST00000333611 RIN2Q8WYP3 895 aaPredicted RBP13.53□□□□□ -0.24
LIMK2-202ENST00000333611 IRAK4Q9NWZ3 460 aa13.53□□□□□ -0.24
LIMK2-202ENST00000333611 CEMIPQ8WUJ3 1361 aa13.53□□□□□ -0.24
LIMK2-202ENST00000333611 PLEKHG1Q9ULL1 1385 aa13.53□□□□□ -0.24
LIMK2-202ENST00000333611 DHX58Q96C10 678 aa13.53□□□□□ -0.24
LIMK2-202ENST00000333611 MRFAP1L1Q96HT8 127 aa13.53□□□□□ -0.24
LIMK2-202ENST00000333611 FAM53CQ9NYF3 392 aa13.53□□□□□ -0.24
LIMK2-202ENST00000333611 AKAP2Q9Y2D5 859 aa13.53□□□□□ -0.24
LIMK2-202ENST00000333611 ATP1A3P13637 1013 aa13.52□□□□□ -0.24
LIMK2-202ENST00000333611 CHRNA2Q15822 529 aa13.52□□□□□ -0.24
LIMK2-202ENST00000333611 SPECC1Q5M775 1068 aa13.52□□□□□ -0.24
LIMK2-202ENST00000333611 MEX3CQ5U5Q3 659 aaKnown RBP13.52□□□□□ -0.24
LIMK2-202ENST00000333611 ARMC3Q5W041 872 aa13.52□□□□□ -0.24
LIMK2-202ENST00000333611 GPR161Q8N6U8 529 aaKnown RBP13.52□□□□□ -0.24
LIMK2-202ENST00000333611 KCNH5Q8NCM2 988 aa13.52□□□□□ -0.24
LIMK2-202ENST00000333611 AIFM3Q96NN9 605 aa13.52□□□□□ -0.24
LIMK2-202ENST00000333611 METTL22Q9BUU2 404 aaPredicted RBP13.52□□□□□ -0.24
LIMK2-202ENST00000333611 RCOR1Q9UKL0 485 aa13.52□□□□□ -0.24
LIMK2-202ENST00000333611 PFKFB2O60825 505 aa13.52□□□□□ -0.25
LIMK2-202ENST00000333611 CDR1P51861 262 aa13.52□□□□□ -0.25
LIMK2-202ENST00000333611 LRRC31Q6UY01 552 aa13.52□□□□□ -0.25
LIMK2-202ENST00000333611 CTCFLQ8NI51 663 aaPredicted RBP13.52□□□□□ -0.25
LIMK2-202ENST00000333611 NOC3LQ8WTT2 800 aaKnown RBP13.52□□□□□ -0.25
LIMK2-202ENST00000333611 FUT8Q9BYC5 575 aa13.52□□□□□ -0.25
LIMK2-202ENST00000333611 IRX2Q9BZI1 471 aaPredicted RBP13.52□□□□□ -0.25
LIMK2-202ENST00000333611 FAM208AQ9UK61 1670 aaKnown RBP13.52□□□□□ -0.25
LIMK2-202ENST00000333611 SHTN1A0MZ66 631 aa13.52□□□□□ -0.25
LIMK2-202ENST00000333611 ZEB2O60315 1214 aa13.52□□□□□ -0.25
LIMK2-202ENST00000333611 PDIA3P30101 505 aaKnown RBP13.52□□□□□ -0.25
LIMK2-202ENST00000333611 CHMP4BP1P59074 171 aa13.52□□□□□ -0.25
LIMK2-202ENST00000333611 KBTBD3Q8NAB2 608 aa13.52□□□□□ -0.25
LIMK2-202ENST00000333611 CABLES1Q8TDN4 633 aa13.52□□□□□ -0.25
LIMK2-202ENST00000333611 AFAP1L1Q8TED9 768 aa13.52□□□□□ -0.25
LIMK2-202ENST00000333611 VEZTQ9HBM0 779 aa13.52□□□□□ -0.25
LIMK2-202ENST00000333611 CPSF2Q9P2I0 782 aaKnown RBP13.52□□□□□ -0.25
LIMK2-202ENST00000333611 MKRN1Q9UHC7 482 aaKnown RBP13.52□□□□□ -0.25
LIMK2-202ENST00000333611 CCDC196A0A1B0GTZ2 297 aa13.51□□□□□ -0.25
LIMK2-202ENST00000333611 MYO1FO00160 1098 aa13.51□□□□□ -0.25
LIMK2-202ENST00000333611 SPTLC2O15270 562 aa13.51□□□□□ -0.25
LIMK2-202ENST00000333611 KIF1CO43896 1103 aaKnown RBP13.51□□□□□ -0.25
LIMK2-202ENST00000333611 TFRCP02786 760 aaKnown RBP13.51□□□□□ -0.25
LIMK2-202ENST00000333611 GBP2P32456 591 aaPredicted RBP13.51□□□□□ -0.25
LIMK2-202ENST00000333611 LRRC24Q50LG9 513 aa13.51□□□□□ -0.25
LIMK2-202ENST00000333611 CCDC150Q8NCX0 1101 aa13.51□□□□□ -0.25
LIMK2-202ENST00000333611 WDR24Q96S15 920 aa13.51□□□□□ -0.25
LIMK2-202ENST00000333611 ABCB6Q9NP58 842 aa13.51□□□□□ -0.25
LIMK2-202ENST00000333611 ZMYND10O75800 440 aa13.51□□□□□ -0.25
LIMK2-202ENST00000333611 HSPD1P10809 573 aaKnown RBP13.51□□□□□ -0.25
LIMK2-202ENST00000333611 TOP1P11387 765 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms