RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 TRPM7Q96QT4 1865 aa19.42■□□□□ 0.7
LRRC28-202ENST00000331450 CYP7A1P22680 504 aa19.42■□□□□ 0.7
LRRC28-202ENST00000331450 BTDP43251 543 aa19.42■□□□□ 0.7
LRRC28-202ENST00000331450 UBE3CQ15386 1083 aa19.42■□□□□ 0.7
LRRC28-202ENST00000331450 ZSCAN25Q6NSZ9 544 aa19.42■□□□□ 0.7
LRRC28-202ENST00000331450 TICAM2Q86XR7 235 aa19.42■□□□□ 0.7
LRRC28-202ENST00000331450 CNTROBQ8N137 903 aa19.42■□□□□ 0.7
LRRC28-202ENST00000331450 FSD1Q9BTV5 496 aa19.42■□□□□ 0.7
LRRC28-202ENST00000331450 TDRD3Q9H7E2 651 aaKnown RBP19.42■□□□□ 0.7
LRRC28-202ENST00000331450 GTF3C3Q9Y5Q9 886 aa19.42■□□□□ 0.7
LRRC28-202ENST00000331450 RHBDL3P58872 404 aa19.41■□□□□ 0.7
LRRC28-202ENST00000331450 SLFNL1Q499Z3 407 aa19.41■□□□□ 0.7
LRRC28-202ENST00000331450 ANGEL2Q5VTE6 544 aaKnown RBP19.41■□□□□ 0.7
LRRC28-202ENST00000331450 ZNF70Q9UC06 446 aaPredicted RBP19.41■□□□□ 0.7
LRRC28-202ENST00000331450 TRIM6-TRIM34B2RNG4 842 aa19.4■□□□□ 0.7
LRRC28-202ENST00000331450 MYO1BO43795 1136 aa19.4■□□□□ 0.7
LRRC28-202ENST00000331450 TOMM70O94826 608 aa19.4■□□□□ 0.7
LRRC28-202ENST00000331450 ZFYP08048 801 aaPredicted RBP19.4■□□□□ 0.7
LRRC28-202ENST00000331450 RGS3P49796 1198 aa19.4■□□□□ 0.7
LRRC28-202ENST00000331450 PPP4CP60510 307 aa19.4■□□□□ 0.7
LRRC28-202ENST00000331450 CDC42EP5Q6NZY7 148 aa19.4■□□□□ 0.7
LRRC28-202ENST00000331450 MYH1P12882 1939 aa19.39■□□□□ 0.7
LRRC28-202ENST00000331450 CLRN2A0PK11 232 aa19.39■□□□□ 0.69
LRRC28-202ENST00000331450 RNF113AO15541 343 aaKnown RBP19.39■□□□□ 0.69
LRRC28-202ENST00000331450 SDSP20132 328 aa19.39■□□□□ 0.69
LRRC28-202ENST00000331450 CHADLQ6NUI6 762 aa19.39■□□□□ 0.69
LRRC28-202ENST00000331450 RBM46Q8TBY0 533 aaKnown RBP19.39■□□□□ 0.69
LRRC28-202ENST00000331450 RIOK1Q9BRS2 568 aaKnown RBP19.39■□□□□ 0.69
LRRC28-202ENST00000331450 AATFQ9NY61 560 aaKnown RBP eCLIP19.39■□□□□ 0.69
LRRC28-202ENST00000331450 SIPA1L1O43166 1804 aa19.39■□□□□ 0.69
LRRC28-202ENST00000331450 CNTNAP1P78357 1384 aa19.38■□□□□ 0.69
LRRC28-202ENST00000331450 LRRFIP1Q32MZ4 808 aaKnown RBP19.38■□□□□ 0.69
LRRC28-202ENST00000331450 BMP2KLQ5H9B9 411 aa19.38■□□□□ 0.69
LRRC28-202ENST00000331450 FKBP1CQ5VVH2 108 aa19.38■□□□□ 0.69
LRRC28-202ENST00000331450 MAP1SQ66K74 1059 aaPredicted RBP19.38■□□□□ 0.69
LRRC28-202ENST00000331450 APOBEC3FQ8IUX4 373 aaKnown RBP19.38■□□□□ 0.69
LRRC28-202ENST00000331450 MIGA1Q8NAN2 632 aa19.38■□□□□ 0.69
LRRC28-202ENST00000331450 APPBP2Q92624 585 aa19.38■□□□□ 0.69
LRRC28-202ENST00000331450 RILPL2Q969X0 211 aa19.38■□□□□ 0.69
LRRC28-202ENST00000331450 CLEC11AQ9Y240 323 aa19.38■□□□□ 0.69
LRRC28-202ENST00000331450 BAG3O95817 575 aa19.37■□□□□ 0.69
LRRC28-202ENST00000331450 DYNLL1P63167 89 aaKnown RBP19.37■□□□□ 0.69
LRRC28-202ENST00000331450 ZMYM1Q5SVZ6 1142 aa19.37■□□□□ 0.69
LRRC28-202ENST00000331450 CERS3Q8IU89 383 aa19.37■□□□□ 0.69
LRRC28-202ENST00000331450 DCPSQ96C86 337 aaKnown RBP19.37■□□□□ 0.69
LRRC28-202ENST00000331450 NOL10Q9BSC4 688 aaKnown RBP19.37■□□□□ 0.69
LRRC28-202ENST00000331450 IDI2Q9BXS1 227 aa19.37■□□□□ 0.69
LRRC28-202ENST00000331450 USP40Q9NVE5 1235 aa19.37■□□□□ 0.69
LRRC28-202ENST00000331450 BAZ2AQ9UIF9 1905 aaKnown RBP19.37■□□□□ 0.69
LRRC28-202ENST00000331450 LAMB1P07942 1786 aa19.37■□□□□ 0.69
LRRC28-202ENST00000331450 PAPPA2Q9BXP8 1791 aa19.37■□□□□ 0.69
LRRC28-202ENST00000331450 COL2A1P02458 1487 aaPredicted RBP19.36■□□□□ 0.69
LRRC28-202ENST00000331450 RPAP1Q9BWH6 1393 aaPredicted RBP19.36■□□□□ 0.69
LRRC28-202ENST00000331450 WDHD1O75717 1129 aaPredicted RBP19.36■□□□□ 0.69
LRRC28-202ENST00000331450 PLCG2P16885 1265 aa19.36■□□□□ 0.69
LRRC28-202ENST00000331450 CACNB3P54284 484 aa19.36■□□□□ 0.69
LRRC28-202ENST00000331450 SMC1BQ8NDV3 1235 aa19.36■□□□□ 0.69
LRRC28-202ENST00000331450 SH3RF3Q8TEJ3 882 aaPredicted RBP19.36■□□□□ 0.69
LRRC28-202ENST00000331450 OSBP2Q969R2 916 aa19.36■□□□□ 0.69
LRRC28-202ENST00000331450 PUS7LQ9H0K6 701 aaKnown RBP19.36■□□□□ 0.69
LRRC28-202ENST00000331450 VEZTQ9HBM0 779 aa19.36■□□□□ 0.69
LRRC28-202ENST00000331450 MAGEB6P1A0A0J9YX57 407 aa19.35■□□□□ 0.69
LRRC28-202ENST00000331450 ADM5C9JUS6 153 aa19.35■□□□□ 0.69
LRRC28-202ENST00000331450 ITGBL1O95965 494 aaPredicted RBP19.35■□□□□ 0.69
LRRC28-202ENST00000331450 NFIAQ12857 509 aa19.35■□□□□ 0.69
LRRC28-202ENST00000331450 TNFAIP1Q13829 316 aa19.35■□□□□ 0.69
LRRC28-202ENST00000331450 CDC37L1Q7L3B6 337 aa19.35■□□□□ 0.69
LRRC28-202ENST00000331450 KRT26Q7Z3Y9 468 aa19.35■□□□□ 0.69
LRRC28-202ENST00000331450 FAM83AQ86UY5 434 aa19.35■□□□□ 0.69
LRRC28-202ENST00000331450 LCORLQ8N3X6 602 aa19.35■□□□□ 0.69
LRRC28-202ENST00000331450 GLIS2Q9BZE0 524 aaPredicted RBP19.35■□□□□ 0.69
LRRC28-202ENST00000331450 TMOD2Q9NZR1 351 aa19.35■□□□□ 0.69
LRRC28-202ENST00000331450 FAM198AQ9UFP1 575 aa19.35■□□□□ 0.69
LRRC28-202ENST00000331450 SCAF8Q9UPN6 1271 aaKnown RBP19.35■□□□□ 0.69
LRRC28-202ENST00000331450 M0R2C6 588 aa19.34■□□□□ 0.69
LRRC28-202ENST00000331450 NPM3O75607 178 aaKnown RBP19.34■□□□□ 0.69
LRRC28-202ENST00000331450 MBD4O95243 580 aa19.34■□□□□ 0.69
LRRC28-202ENST00000331450 SULF1Q8IWU6 871 aa19.34■□□□□ 0.69
LRRC28-202ENST00000331450 DDX4Q9NQI0 724 aaKnown RBP19.34■□□□□ 0.69
LRRC28-202ENST00000331450 PPP2R3BQ9Y5P8 575 aa19.34■□□□□ 0.69
LRRC28-202ENST00000331450 SSC5DA1L4H1 1573 aa19.34■□□□□ 0.69
LRRC28-202ENST00000331450 PASKQ96RG2 1323 aa19.33■□□□□ 0.69
LRRC28-202ENST00000331450 A0A0D9SFI3 127 aa19.33■□□□□ 0.68
LRRC28-202ENST00000331450 TCP10L2B9ZVM9 353 aa19.33■□□□□ 0.68
LRRC28-202ENST00000331450 FSTL1Q12841 308 aa19.33■□□□□ 0.68
LRRC28-202ENST00000331450 TEX11Q8IYF3 940 aa19.33■□□□□ 0.68
LRRC28-202ENST00000331450 FAM227BQ96M60 508 aa19.33■□□□□ 0.68
LRRC28-202ENST00000331450 SEC62Q99442 399 aaKnown RBP19.33■□□□□ 0.68
LRRC28-202ENST00000331450 DEFB129Q9H1M3 183 aa19.33■□□□□ 0.68
LRRC28-202ENST00000331450 ARMT1Q9H993 441 aa19.33■□□□□ 0.68
LRRC28-202ENST00000331450 OTOFQ9HC10 1997 aa19.33■□□□□ 0.68
LRRC28-202ENST00000331450 ATRNL1Q5VV63 1379 aa19.32■□□□□ 0.68
LRRC28-202ENST00000331450 ENTPD3O75355 529 aa19.32■□□□□ 0.68
LRRC28-202ENST00000331450 NMIQ13287 307 aaPredicted RBP19.32■□□□□ 0.68
LRRC28-202ENST00000331450 RASA3Q14644 834 aa19.32■□□□□ 0.68
LRRC28-202ENST00000331450 USP48Q86UV5 1035 aa19.32■□□□□ 0.68
LRRC28-202ENST00000331450 TEPSINQ96N21 525 aa19.32■□□□□ 0.68
LRRC28-202ENST00000331450 HELLSQ9NRZ9 838 aa19.32■□□□□ 0.68
LRRC28-202ENST00000331450 FLT1P17948 1338 aa19.31■□□□□ 0.68
LRRC28-202ENST00000331450 LAMA4Q16363 1823 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms