RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 MAP3K9P80192 1104 aa20.87■□□□□ 0.93
CLSTN3-202ENST00000331148 GNL2Q13823 731 aaKnown RBP20.87■□□□□ 0.93
CLSTN3-202ENST00000331148 SPATA31A6Q5VVP1 1343 aa20.87■□□□□ 0.93
CLSTN3-202ENST00000331148 FBXO18Q8NFZ0 1043 aa20.87■□□□□ 0.93
CLSTN3-202ENST00000331148 KLHDC4Q8TBB5 520 aa20.87■□□□□ 0.93
CLSTN3-202ENST00000331148 KCNG4Q8TDN1 519 aa20.87■□□□□ 0.93
CLSTN3-202ENST00000331148 CLIC4Q9Y696 253 aa20.87■□□□□ 0.93
CLSTN3-202ENST00000331148 BCL9O00512 1426 aa20.86■□□□□ 0.93
CLSTN3-202ENST00000331148 NBPF26B4DH59 902 aa20.86■□□□□ 0.93
CLSTN3-202ENST00000331148 CBFA2T2O43439 604 aa20.86■□□□□ 0.93
CLSTN3-202ENST00000331148 ATP5JP18859 108 aa20.86■□□□□ 0.93
CLSTN3-202ENST00000331148 NBPF14Q5TI25 921 aa20.86■□□□□ 0.93
CLSTN3-202ENST00000331148 NBPF10Q6P3W6 841 aaKnown RBP20.86■□□□□ 0.93
CLSTN3-202ENST00000331148 C10orf67Q8IYJ2 551 aa20.86■□□□□ 0.93
CLSTN3-202ENST00000331148 NBPF15Q8N660 670 aa20.86■□□□□ 0.93
CLSTN3-202ENST00000331148 METTL22Q9BUU2 404 aaPredicted RBP20.86■□□□□ 0.93
CLSTN3-202ENST00000331148 TEX13AQ9BXU3 409 aaPredicted RBP20.86■□□□□ 0.93
CLSTN3-202ENST00000331148 PARD6BQ9BYG5 372 aa20.86■□□□□ 0.93
CLSTN3-202ENST00000331148 AGXT2Q9BYV1 514 aa20.86■□□□□ 0.93
CLSTN3-202ENST00000331148 PPP2R2CQ9Y2T4 447 aa20.86■□□□□ 0.93
CLSTN3-202ENST00000331148 MRFAP1Q9Y605 127 aa20.86■□□□□ 0.93
CLSTN3-202ENST00000331148 CASQ1P31415 396 aa20.85■□□□□ 0.93
CLSTN3-202ENST00000331148 GYS2P54840 703 aa20.85■□□□□ 0.93
CLSTN3-202ENST00000331148 UBASH3AP57075 661 aa20.85■□□□□ 0.93
CLSTN3-202ENST00000331148 GOLGA8FQ08AF8 430 aa20.85■□□□□ 0.93
CLSTN3-202ENST00000331148 GOLGA8DPQ0D2H9 430 aa20.85■□□□□ 0.93
CLSTN3-202ENST00000331148 MCMDC2Q4G0Z9 681 aa20.85■□□□□ 0.93
CLSTN3-202ENST00000331148 FAM177A1Q8N128 213 aaPredicted RBP20.85■□□□□ 0.93
CLSTN3-202ENST00000331148 KAT6BQ8WYB5 2073 aa20.85■□□□□ 0.93
CLSTN3-202ENST00000331148 ZNF202O95125 648 aa20.85■□□□□ 0.93
CLSTN3-202ENST00000331148 A1BGP04217 495 aa20.85■□□□□ 0.93
CLSTN3-202ENST00000331148 TMEM139Q8IV31 216 aa20.85■□□□□ 0.93
CLSTN3-202ENST00000331148 VSTM4Q8IW00 320 aa20.85■□□□□ 0.93
CLSTN3-202ENST00000331148 WDR24Q96S15 920 aa20.85■□□□□ 0.93
CLSTN3-202ENST00000331148 ADAM21Q9UKJ8 722 aa20.85■□□□□ 0.93
CLSTN3-202ENST00000331148 NDUFB9Q9Y6M9 179 aa20.85■□□□□ 0.93
CLSTN3-202ENST00000331148 H3BQF6 201 aa20.84■□□□□ 0.93
CLSTN3-202ENST00000331148 YEATS4O95619 227 aa20.84■□□□□ 0.93
CLSTN3-202ENST00000331148 IGKV5-2P06315 115 aa20.84■□□□□ 0.93
CLSTN3-202ENST00000331148 LMAN1P49257 510 aa20.84■□□□□ 0.93
CLSTN3-202ENST00000331148 EXOSC10Q01780 885 aaKnown RBP20.84■□□□□ 0.93
CLSTN3-202ENST00000331148 RABGGTAQ92696 567 aa20.84■□□□□ 0.93
CLSTN3-202ENST00000331148 SPTLC2O15270 562 aa20.84■□□□□ 0.93
CLSTN3-202ENST00000331148 ARHGAP6O43182 974 aa20.84■□□□□ 0.93
CLSTN3-202ENST00000331148 SERPINC1P01008 464 aa20.84■□□□□ 0.93
CLSTN3-202ENST00000331148 SRLQ86TD4 932 aa20.84■□□□□ 0.93
CLSTN3-202ENST00000331148 IQUBQ8NA54 791 aa20.84■□□□□ 0.93
CLSTN3-202ENST00000331148 POLR3EQ9NVU0 708 aa20.84■□□□□ 0.93
CLSTN3-202ENST00000331148 DBNLQ9UJU6 430 aaKnown RBP20.84■□□□□ 0.93
CLSTN3-202ENST00000331148 BCL9LQ86UU0 1499 aa20.84■□□□□ 0.93
CLSTN3-202ENST00000331148 PDIA3P30101 505 aaKnown RBP20.83■□□□□ 0.93
CLSTN3-202ENST00000331148 GNG11P61952 73 aa20.83■□□□□ 0.93
CLSTN3-202ENST00000331148 VPS72Q15906 364 aa20.83■□□□□ 0.93
CLSTN3-202ENST00000331148 CFAP100Q494V2 611 aa20.83■□□□□ 0.93
CLSTN3-202ENST00000331148 FNBP4Q8N3X1 1017 aaPredicted RBP20.83■□□□□ 0.93
CLSTN3-202ENST00000331148 PLBD2Q8NHP8 589 aa20.83■□□□□ 0.93
CLSTN3-202ENST00000331148 MYD88Q99836 296 aa20.83■□□□□ 0.93
CLSTN3-202ENST00000331148 TOP1P11387 765 aaKnown RBP20.83■□□□□ 0.92
CLSTN3-202ENST00000331148 FDPSP14324 419 aaKnown RBP20.83■□□□□ 0.92
CLSTN3-202ENST00000331148 ISM2Q6H9L7 571 aa20.83■□□□□ 0.92
CLSTN3-202ENST00000331148 RRP15Q9Y3B9 282 aaKnown RBP20.83■□□□□ 0.92
CLSTN3-202ENST00000331148 GOLGA6L9A6NEM1 432 aa20.82■□□□□ 0.92
CLSTN3-202ENST00000331148 NEURL1BA8MQ27 555 aa20.82■□□□□ 0.92
CLSTN3-202ENST00000331148 PFKFB1P16118 471 aa20.82■□□□□ 0.92
CLSTN3-202ENST00000331148 HSPA1LP34931 641 aa20.82■□□□□ 0.92
CLSTN3-202ENST00000331148 MYL5Q02045 173 aa20.82■□□□□ 0.92
CLSTN3-202ENST00000331148 LONRF2Q1L5Z9 754 aa20.82■□□□□ 0.92
CLSTN3-202ENST00000331148 MARCH10Q8NA82 808 aaPredicted RBP20.82■□□□□ 0.92
CLSTN3-202ENST00000331148 GOLGA1Q92805 767 aa20.82■□□□□ 0.92
CLSTN3-202ENST00000331148 TMEM232C9JQI7 657 aa20.81■□□□□ 0.92
CLSTN3-202ENST00000331148 NOP2P46087 812 aaKnown RBP20.81■□□□□ 0.92
CLSTN3-202ENST00000331148 JAKMIP3Q5VZ66 844 aa20.81■□□□□ 0.92
CLSTN3-202ENST00000331148 KIFC2Q96AC6 838 aa20.81■□□□□ 0.92
CLSTN3-202ENST00000331148 LAMA4Q16363 1823 aa20.81■□□□□ 0.92
CLSTN3-202ENST00000331148 ACTN2P35609 894 aa20.81■□□□□ 0.92
CLSTN3-202ENST00000331148 OTUD7BQ6GQQ9 843 aa20.81■□□□□ 0.92
CLSTN3-202ENST00000331148 ZNF274Q96GC6 653 aaPredicted RBP20.81■□□□□ 0.92
CLSTN3-202ENST00000331148 MAP2K7O14733 419 aa20.8■□□□□ 0.92
CLSTN3-202ENST00000331148 STARD3NLO95772 234 aa20.8■□□□□ 0.92
CLSTN3-202ENST00000331148 POLR3DP05423 398 aaPredicted RBP20.8■□□□□ 0.92
CLSTN3-202ENST00000331148 TXLNAP40222 546 aa20.8■□□□□ 0.92
CLSTN3-202ENST00000331148 DNAJC10Q8IXB1 793 aa20.8■□□□□ 0.92
CLSTN3-202ENST00000331148 MROH7-TTC4A0A0A0MT08 1334 aa20.8■□□□□ 0.92
CLSTN3-202ENST00000331148 SH3TC1Q8TE82 1336 aa20.8■□□□□ 0.92
CLSTN3-202ENST00000331148 CCDC151A5D8V7 595 aa20.8■□□□□ 0.92
CLSTN3-202ENST00000331148 GCKRQ14397 625 aa20.8■□□□□ 0.92
CLSTN3-202ENST00000331148 PTPN21Q16825 1174 aa20.8■□□□□ 0.92
CLSTN3-202ENST00000331148 FAM98CQ17RN3 349 aaKnown RBP20.8■□□□□ 0.92
CLSTN3-202ENST00000331148 AXDND1Q5T1B0 1012 aaPredicted RBP20.8■□□□□ 0.92
CLSTN3-202ENST00000331148 DOT1LQ8TEK3 1739 aa20.79■□□□□ 0.92
CLSTN3-202ENST00000331148 CMA1P23946 247 aa20.79■□□□□ 0.92
CLSTN3-202ENST00000331148 IRX3P78415 501 aaPredicted RBP20.79■□□□□ 0.92
CLSTN3-202ENST00000331148 TNNI3KQ59H18 835 aa20.79■□□□□ 0.92
CLSTN3-202ENST00000331148 MYSM1Q5VVJ2 828 aa20.79■□□□□ 0.92
CLSTN3-202ENST00000331148 DHX58Q96C10 678 aa20.79■□□□□ 0.92
CLSTN3-202ENST00000331148 TUBE1Q9UJT0 475 aa20.79■□□□□ 0.92
CLSTN3-202ENST00000331148 FPGT-TNNI3KV9GXZ4 949 aa20.79■□□□□ 0.92
CLSTN3-202ENST00000331148 DHX16O60231 1041 aaKnown RBP20.79■□□□□ 0.92
CLSTN3-202ENST00000331148 BRD3Q15059 726 aa20.79■□□□□ 0.92
CLSTN3-202ENST00000331148 BAG1Q99933 345 aaPredicted RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms