RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 CASP8Q14790 479 aa14.65□□□□□ -0.06
CCDC60-201ENST00000327554 PWP2Q15269 919 aaKnown RBP14.65□□□□□ -0.06
CCDC60-201ENST00000327554 HSP90AA4PQ58FG1 418 aa14.65□□□□□ -0.06
CCDC60-201ENST00000327554 OLFM4Q6UX06 510 aa14.65□□□□□ -0.06
CCDC60-201ENST00000327554 FBXL16Q8N461 479 aa14.65□□□□□ -0.06
CCDC60-201ENST00000327554 KBTBD3Q8NAB2 608 aa14.65□□□□□ -0.06
CCDC60-201ENST00000327554 CNNM3Q8NE01 707 aa14.65□□□□□ -0.06
CCDC60-201ENST00000327554 DRC1Q96MC2 740 aa14.65□□□□□ -0.06
CCDC60-201ENST00000327554 C4AP0C0L4 1744 aa14.64□□□□□ -0.07
CCDC60-201ENST00000327554 C4BP0C0L5 1744 aa14.64□□□□□ -0.07
CCDC60-201ENST00000327554 ANKRD65E5RJM6 399 aa14.64□□□□□ -0.07
CCDC60-201ENST00000327554 NLRP6P59044 892 aa14.64□□□□□ -0.07
CCDC60-201ENST00000327554 VSNL1P62760 191 aa14.64□□□□□ -0.07
CCDC60-201ENST00000327554 TFCP2Q12800 502 aa14.64□□□□□ -0.07
CCDC60-201ENST00000327554 DBNDD2Q9BQY9 259 aa14.64□□□□□ -0.07
CCDC60-201ENST00000327554 NWD2Q9ULI1 1742 aa14.64□□□□□ -0.07
CCDC60-201ENST00000327554 HEG1Q9ULI3 1381 aa14.64□□□□□ -0.07
CCDC60-201ENST00000327554 A0A0U1RQJ8 604 aa14.64□□□□□ -0.07
CCDC60-201ENST00000327554 PRAMEF22A3QJZ6 481 aa14.64□□□□□ -0.07
CCDC60-201ENST00000327554 CCDC175P0C221 793 aa14.64□□□□□ -0.07
CCDC60-201ENST00000327554 ZNF18P17022 549 aa14.64□□□□□ -0.07
CCDC60-201ENST00000327554 ATRIPQ8WXE1 791 aa14.64□□□□□ -0.07
CCDC60-201ENST00000327554 MYCBPQ99417 103 aaPredicted RBP14.64□□□□□ -0.07
CCDC60-201ENST00000327554 COPRSQ9NQ92 184 aa14.64□□□□□ -0.07
CCDC60-201ENST00000327554 TOMM22Q9NS69 142 aa14.64□□□□□ -0.07
CCDC60-201ENST00000327554 LTN1O94822 1766 aa14.64□□□□□ -0.07
CCDC60-201ENST00000327554 PALLDQ8WX93 1383 aa14.63□□□□□ -0.07
CCDC60-201ENST00000327554 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.63□□□□□ -0.07
CCDC60-201ENST00000327554 LZTFL1Q9NQ48 299 aa14.63□□□□□ -0.07
CCDC60-201ENST00000327554 ADGRG1Q9Y653 693 aa14.63□□□□□ -0.07
CCDC60-201ENST00000327554 SOWAHDA6NJG2 315 aa14.63□□□□□ -0.07
CCDC60-201ENST00000327554 RFX5P48382 616 aaPredicted RBP14.63□□□□□ -0.07
CCDC60-201ENST00000327554 SUGP1Q8IWZ8 645 aaKnown RBP14.63□□□□□ -0.07
CCDC60-201ENST00000327554 NGDNQ8NEJ9 315 aaKnown RBP14.63□□□□□ -0.07
CCDC60-201ENST00000327554 HELLSQ9NRZ9 838 aa14.63□□□□□ -0.07
CCDC60-201ENST00000327554 PCDHA5Q9Y5H7 936 aa14.63□□□□□ -0.07
CCDC60-201ENST00000327554 RGPD2P0DJD1 1756 aa14.62□□□□□ -0.07
CCDC60-201ENST00000327554 PHACTR2O75167 634 aa14.62□□□□□ -0.07
CCDC60-201ENST00000327554 TFRCP02786 760 aaKnown RBP14.62□□□□□ -0.07
CCDC60-201ENST00000327554 HSPD1P10809 573 aaKnown RBP14.62□□□□□ -0.07
CCDC60-201ENST00000327554 RAD9BQ6WBX8 426 aa14.62□□□□□ -0.07
CCDC60-201ENST00000327554 CCDC102AQ96A19 550 aa14.62□□□□□ -0.07
CCDC60-201ENST00000327554 FAM204AQ9H8W3 233 aa14.62□□□□□ -0.07
CCDC60-201ENST00000327554 HPS5Q9UPZ3 1129 aa14.62□□□□□ -0.07
CCDC60-201ENST00000327554 SETD1BQ9UPS6 1966 aaKnown RBP14.62□□□□□ -0.07
CCDC60-201ENST00000327554 ECM29Q5VYK3 1845 aa14.62□□□□□ -0.07
CCDC60-201ENST00000327554 LRRIQ3A6PVS8 624 aaPredicted RBP14.61□□□□□ -0.07
CCDC60-201ENST00000327554 PPP6R2O75170 966 aa14.61□□□□□ -0.07
CCDC60-201ENST00000327554 PPFIA4O75335 1185 aa14.61□□□□□ -0.07
CCDC60-201ENST00000327554 RHOXF2BP0C7M4 288 aa14.61□□□□□ -0.07
CCDC60-201ENST00000327554 PTPAQ15257 358 aa14.61□□□□□ -0.07
CCDC60-201ENST00000327554 LONRF3Q496Y0 759 aa14.61□□□□□ -0.07
CCDC60-201ENST00000327554 RESP18Q5W5W9 173 aa14.61□□□□□ -0.07
CCDC60-201ENST00000327554 EFCAB13Q8IY85 973 aa14.61□□□□□ -0.07
CCDC60-201ENST00000327554 RHOXF2Q9BQY4 288 aa14.61□□□□□ -0.07
CCDC60-201ENST00000327554 PLEKHA4Q9H4M7 779 aa14.61□□□□□ -0.07
CCDC60-201ENST00000327554 MED4Q9NPJ6 270 aa14.61□□□□□ -0.07
CCDC60-201ENST00000327554 TUBB4BP68371 445 aa14.61□□□□□ -0.07
CCDC60-201ENST00000327554 PTPN12Q05209 780 aaKnown RBP14.61□□□□□ -0.07
CCDC60-201ENST00000327554 FMR1Q06787 632 aaKnown RBP eCLIP14.61□□□□□ -0.07
CCDC60-201ENST00000327554 TUBB2AQ13885 445 aa14.61□□□□□ -0.07
CCDC60-201ENST00000327554 HSP90B2PQ58FF3 399 aa14.61□□□□□ -0.07
CCDC60-201ENST00000327554 ARHGEF25Q86VW2 580 aa14.61□□□□□ -0.07
CCDC60-201ENST00000327554 TUBB2BQ9BVA1 445 aa14.61□□□□□ -0.07
CCDC60-201ENST00000327554 TEX13AQ9BXU3 409 aaPredicted RBP14.61□□□□□ -0.07
CCDC60-201ENST00000327554 RAI14Q9P0K7 980 aa14.61□□□□□ -0.07
CCDC60-201ENST00000327554 ZMYM1Q5SVZ6 1142 aa14.6□□□□□ -0.07
CCDC60-201ENST00000327554 PANX2Q96RD6 677 aa14.6□□□□□ -0.07
CCDC60-201ENST00000327554 NFE2L3Q9Y4A8 694 aa14.6□□□□□ -0.07
CCDC60-201ENST00000327554 NEURL1BA8MQ27 555 aa14.6□□□□□ -0.07
CCDC60-201ENST00000327554 FOXN1O15353 648 aa14.6□□□□□ -0.07
CCDC60-201ENST00000327554 KIF5CO60282 957 aa14.6□□□□□ -0.07
CCDC60-201ENST00000327554 MMP14P50281 582 aa14.6□□□□□ -0.07
CCDC60-201ENST00000327554 AIMP1Q12904 312 aaKnown RBP14.6□□□□□ -0.07
CCDC60-201ENST00000327554 SART3Q15020 963 aaKnown RBP14.6□□□□□ -0.07
CCDC60-201ENST00000327554 TTLL5Q6EMB2 1281 aa14.6□□□□□ -0.07
CCDC60-201ENST00000327554 MPRIPQ6WCQ1 1025 aa14.6□□□□□ -0.07
CCDC60-201ENST00000327554 CLIC6Q96NY7 704 aa14.6□□□□□ -0.07
CCDC60-201ENST00000327554 GBP3Q9H0R5 595 aa14.6□□□□□ -0.07
CCDC60-201ENST00000327554 SIPA1L3O60292 1781 aaPredicted RBP14.6□□□□□ -0.07
CCDC60-201ENST00000327554 MYH8P13535 1937 aa14.6□□□□□ -0.07
CCDC60-201ENST00000327554 DDX58O95786 925 aaKnown RBP14.59□□□□□ -0.07
CCDC60-201ENST00000327554 MDM2Q00987 491 aaPredicted RBP14.59□□□□□ -0.07
CCDC60-201ENST00000327554 NR1I3Q14994 352 aa14.59□□□□□ -0.07
CCDC60-201ENST00000327554 ZNF569Q5MCW4 686 aa14.59□□□□□ -0.07
CCDC60-201ENST00000327554 MMS22LQ6ZRQ5 1243 aa14.59□□□□□ -0.07
CCDC60-201ENST00000327554 TADA2BQ86TJ2 420 aa14.59□□□□□ -0.07
CCDC60-201ENST00000327554 ANKRD24Q8TF21 1146 aa14.59□□□□□ -0.07
CCDC60-201ENST00000327554 MED15Q96RN5 788 aa14.59□□□□□ -0.07
CCDC60-201ENST00000327554 DEF6Q9H4E7 631 aa14.59□□□□□ -0.07
CCDC60-201ENST00000327554 KLF18A0A0U1RQI7 1052 aa14.59□□□□□ -0.07
CCDC60-201ENST00000327554 AKR1B15C9JRZ8 316 aaPredicted RBP14.59□□□□□ -0.07
CCDC60-201ENST00000327554 PRPF6O94906 941 aaKnown RBP14.59□□□□□ -0.07
CCDC60-201ENST00000327554 HDGFP51858 240 aaKnown RBP14.59□□□□□ -0.07
CCDC60-201ENST00000327554 GCKRQ14397 625 aa14.59□□□□□ -0.07
CCDC60-201ENST00000327554 KIF4BQ2VIQ3 1234 aa14.59□□□□□ -0.07
CCDC60-201ENST00000327554 SWT1Q5T5J6 900 aaKnown RBP14.59□□□□□ -0.07
CCDC60-201ENST00000327554 CCDC102BQ68D86 513 aa14.59□□□□□ -0.07
CCDC60-201ENST00000327554 MAP3K14Q99558 947 aa14.59□□□□□ -0.07
CCDC60-201ENST00000327554 MAN1B1Q9UKM7 699 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms