RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 C4BP0C0L5 1744 aa23.05■■□□□ 1.28
SOX2-201ENST00000325404 GPTP24298 496 aa23.05■■□□□ 1.28
SOX2-201ENST00000325404 NCBP1Q09161 790 aaKnown RBP23.05■■□□□ 1.28
SOX2-201ENST00000325404 SLC39A14Q15043 492 aa23.05■■□□□ 1.28
SOX2-201ENST00000325404 FEZ1Q99689 392 aa23.05■■□□□ 1.28
SOX2-201ENST00000325404 ANGEL1Q9UNK9 670 aaKnown RBP23.05■■□□□ 1.28
SOX2-201ENST00000325404 KCNQ2O43526 872 aa23.05■■□□□ 1.28
SOX2-201ENST00000325404 SLC3A2P08195 630 aaKnown RBP23.05■■□□□ 1.28
SOX2-201ENST00000325404 TPM4P67936 248 aa23.05■■□□□ 1.28
SOX2-201ENST00000325404 NLRP10Q86W26 655 aa23.05■■□□□ 1.28
SOX2-201ENST00000325404 FAM89AQ96GI7 184 aa23.05■■□□□ 1.28
SOX2-201ENST00000325404 FAM237AA0A1B0GTK4 181 aa23.04■■□□□ 1.28
SOX2-201ENST00000325404 ZNF202O95125 648 aa23.04■■□□□ 1.28
SOX2-201ENST00000325404 CRKLP46109 303 aaKnown RBP23.04■■□□□ 1.28
SOX2-201ENST00000325404 EIF5P55010 431 aaKnown RBP23.04■■□□□ 1.28
SOX2-201ENST00000325404 OTUD7BQ6GQQ9 843 aa23.04■■□□□ 1.28
SOX2-201ENST00000325404 INTS5Q6P9B9 1019 aaKnown RBP23.04■■□□□ 1.28
SOX2-201ENST00000325404 TBC1D2BQ9UPU7 963 aa23.04■■□□□ 1.28
SOX2-201ENST00000325404 FAM177BA6PVY3 158 aa23.04■■□□□ 1.28
SOX2-201ENST00000325404 POLR3DP05423 398 aaPredicted RBP23.04■■□□□ 1.28
SOX2-201ENST00000325404 IKBKBO14920 756 aa23.03■■□□□ 1.28
SOX2-201ENST00000325404 PPP6R2O75170 966 aa23.03■■□□□ 1.28
SOX2-201ENST00000325404 MCAMP43121 646 aa23.03■■□□□ 1.28
SOX2-201ENST00000325404 PTPN14Q15678 1187 aa23.03■■□□□ 1.28
SOX2-201ENST00000325404 METTL24Q5JXM2 366 aa23.03■■□□□ 1.28
SOX2-201ENST00000325404 NBPF11Q86T75 865 aa23.03■■□□□ 1.28
SOX2-201ENST00000325404 CCDC150Q8NCX0 1101 aa23.03■■□□□ 1.28
SOX2-201ENST00000325404 TMEM87BQ96K49 555 aa23.03■■□□□ 1.28
SOX2-201ENST00000325404 AKAP11Q9UKA4 1901 aa23.03■■□□□ 1.28
SOX2-201ENST00000325404 ITPK1Q13572 414 aa23.03■■□□□ 1.28
SOX2-201ENST00000325404 ALX1Q15699 326 aa23.03■■□□□ 1.28
SOX2-201ENST00000325404 CPLX2Q6PUV4 134 aaKnown RBP23.03■■□□□ 1.28
SOX2-201ENST00000325404 CCAR2Q8N163 923 aaKnown RBP23.03■■□□□ 1.28
SOX2-201ENST00000325404 JMYQ8N9B5 988 aa23.03■■□□□ 1.28
SOX2-201ENST00000325404 SH2B2O14492 632 aaPredicted RBP23.02■■□□□ 1.28
SOX2-201ENST00000325404 TUBB4AP04350 444 aa23.02■■□□□ 1.28
SOX2-201ENST00000325404 VGLL2Q8N8G2 317 aa23.02■■□□□ 1.28
SOX2-201ENST00000325404 TTLL11Q8NHH1 800 aa23.02■■□□□ 1.28
SOX2-201ENST00000325404 NBPF3Q9H094 633 aa23.02■■□□□ 1.28
SOX2-201ENST00000325404 KIF28PB7ZC32 967 aa23.02■■□□□ 1.27
SOX2-201ENST00000325404 PPFIA3O75145 1194 aa23.02■■□□□ 1.27
SOX2-201ENST00000325404 DPCR1Q3MIW9 517 aa23.02■■□□□ 1.27
SOX2-201ENST00000325404 MEX3CQ5U5Q3 659 aaKnown RBP23.02■■□□□ 1.27
SOX2-201ENST00000325404 FILIP1Q7Z7B0 1213 aa23.02■■□□□ 1.27
SOX2-201ENST00000325404 CICQ96RK0 1608 aaPredicted RBP23.01■■□□□ 1.27
SOX2-201ENST00000325404 ARID5BQ14865 1188 aa23.01■■□□□ 1.27
SOX2-201ENST00000325404 LDHAL6AQ6ZMR3 332 aa23.01■■□□□ 1.27
SOX2-201ENST00000325404 CGNQ9P2M7 1197 aaKnown RBP23.01■■□□□ 1.27
SOX2-201ENST00000325404 ANKRD18BA2A2Z9 1011 aa23.01■■□□□ 1.27
SOX2-201ENST00000325404 PFKFB1P16118 471 aa23.01■■□□□ 1.27
SOX2-201ENST00000325404 UTP14CQ5TAP6 766 aaKnown RBP23.01■■□□□ 1.27
SOX2-201ENST00000325404 TUBE1Q9UJT0 475 aa23.01■■□□□ 1.27
SOX2-201ENST00000325404 HPSEQ9Y251 543 aa23.01■■□□□ 1.27
SOX2-201ENST00000325404 MYO1BO43795 1136 aa23■■□□□ 1.27
SOX2-201ENST00000325404 UQCRFS1P1P0C7P4 283 aa23■■□□□ 1.27
SOX2-201ENST00000325404 ARID4AP29374 1257 aaPredicted RBP23■■□□□ 1.27
SOX2-201ENST00000325404 ANKRD36CQ5JPF3 1778 aa23■■□□□ 1.27
SOX2-201ENST00000325404 ITGA6P23229 1130 aa23■■□□□ 1.27
SOX2-201ENST00000325404 METAP2P50579 478 aaKnown RBP eCLIP23■■□□□ 1.27
SOX2-201ENST00000325404 SLC9C2Q5TAH2 1124 aa23■■□□□ 1.27
SOX2-201ENST00000325404 CTSWP56202 376 aa22.99■■□□□ 1.27
SOX2-201ENST00000325404 SGMS1Q86VZ5 419 aa22.99■■□□□ 1.27
SOX2-201ENST00000325404 ELOA2Q8IYF1 753 aaPredicted RBP22.99■■□□□ 1.27
SOX2-201ENST00000325404 ALG1Q9BT22 464 aa22.99■■□□□ 1.27
SOX2-201ENST00000325404 PSDA5PKW4 1024 aaPredicted RBP22.99■■□□□ 1.27
SOX2-201ENST00000325404 HSPA1LP34931 641 aa22.99■■□□□ 1.27
SOX2-201ENST00000325404 NCAPHQ15003 741 aa22.99■■□□□ 1.27
SOX2-201ENST00000325404 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.99■■□□□ 1.27
SOX2-201ENST00000325404 TRMT112Q9UI30 125 aaKnown RBP22.99■■□□□ 1.27
SOX2-201ENST00000325404 A0A087WWV3 80 aa22.98■■□□□ 1.27
SOX2-201ENST00000325404 PI16Q6UXB8 463 aa22.98■■□□□ 1.27
SOX2-201ENST00000325404 NUP98P52948 1817 aa22.98■■□□□ 1.27
SOX2-201ENST00000325404 STK36Q9NRP7 1315 aa22.98■■□□□ 1.27
SOX2-201ENST00000325404 USP27XA6NNY8 438 aa22.98■■□□□ 1.27
SOX2-201ENST00000325404 PDE8BO95263 885 aa22.98■■□□□ 1.27
SOX2-201ENST00000325404 U2AF2P26368 475 aaKnown RBP eCLIP22.98■■□□□ 1.27
SOX2-201ENST00000325404 APOA5Q6Q788 366 aa22.98■■□□□ 1.27
SOX2-201ENST00000325404 TBC1D10CQ8IV04 446 aa22.98■■□□□ 1.27
SOX2-201ENST00000325404 ZNF34Q8IZ26 560 aa22.98■■□□□ 1.27
SOX2-201ENST00000325404 ERCC4Q92889 916 aaPredicted RBP22.98■■□□□ 1.27
SOX2-201ENST00000325404 NRDCO43847 1150 aa22.97■■□□□ 1.27
SOX2-201ENST00000325404 LIFRP42702 1097 aa22.97■■□□□ 1.27
SOX2-201ENST00000325404 PTPAQ15257 358 aa22.97■■□□□ 1.27
SOX2-201ENST00000325404 CYB5R4Q7L1T6 521 aa22.97■■□□□ 1.27
SOX2-201ENST00000325404 VPS37DQ86XT2 251 aa22.97■■□□□ 1.27
SOX2-201ENST00000325404 KIF18AQ8NI77 898 aa22.97■■□□□ 1.27
SOX2-201ENST00000325404 XPO4Q9C0E2 1151 aaKnown RBP22.97■■□□□ 1.27
SOX2-201ENST00000325404 GREM2Q9H772 168 aa22.97■■□□□ 1.27
SOX2-201ENST00000325404 RREB1Q92766 1687 aa22.97■■□□□ 1.27
SOX2-201ENST00000325404 WDHD1O75717 1129 aaPredicted RBP22.97■■□□□ 1.27
SOX2-201ENST00000325404 KRT40Q6A162 431 aa22.97■■□□□ 1.27
SOX2-201ENST00000325404 SYNE4Q8N205 404 aa22.97■■□□□ 1.27
SOX2-201ENST00000325404 CNNM1Q9NRU3 951 aa22.97■■□□□ 1.27
SOX2-201ENST00000325404 NID2Q14112 1375 aa22.96■■□□□ 1.27
SOX2-201ENST00000325404 SYKP43405 635 aa22.96■■□□□ 1.27
SOX2-201ENST00000325404 IGDCC4Q8TDY8 1250 aa22.96■■□□□ 1.27
SOX2-201ENST00000325404 PIH1D3Q9NQM4 214 aaKnown RBP22.96■■□□□ 1.27
SOX2-201ENST00000325404 UBN2Q6ZU65 1347 aa22.96■■□□□ 1.27
SOX2-201ENST00000325404 TCRBV5S4A2TA0A5A2 114 aa22.96■■□□□ 1.27
SOX2-201ENST00000325404 IRS4O14654 1257 aaPredicted RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms