RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 TEX13AQ9BXU3 409 aaPredicted RBP29.4■■■□□ 2.3
HOXB3-201ENST00000311626 XPO4Q9C0E2 1151 aaKnown RBP29.4■■■□□ 2.3
HOXB3-201ENST00000311626 ZMYM6O95789 1325 aa29.4■■■□□ 2.3
HOXB3-201ENST00000311626 CTIFO43310 598 aaKnown RBP29.4■■■□□ 2.3
HOXB3-201ENST00000311626 PTPN21Q16825 1174 aa29.4■■■□□ 2.3
HOXB3-201ENST00000311626 CEP135Q66GS9 1140 aa29.4■■■□□ 2.3
HOXB3-201ENST00000311626 AIDAQ96BJ3 306 aa29.39■■■□□ 2.3
HOXB3-201ENST00000311626 CCDC82Q8N4S0 544 aa29.39■■■□□ 2.29
HOXB3-201ENST00000311626 ZKSCAN3Q9BRR0 538 aa29.39■■■□□ 2.29
HOXB3-201ENST00000311626 UBN2Q6ZU65 1347 aa29.38■■■□□ 2.29
HOXB3-201ENST00000311626 SMTNL1A8MU46 457 aa29.38■■■□□ 2.29
HOXB3-201ENST00000311626 U2AF2P26368 475 aaKnown RBP eCLIP29.38■■■□□ 2.292e-6■□□□□ 10.7
HOXB3-201ENST00000311626 NCBP1Q09161 790 aaKnown RBP29.38■■■□□ 2.29
HOXB3-201ENST00000311626 ARMT1Q9H993 441 aa29.38■■■□□ 2.29
HOXB3-201ENST00000311626 CDHR2Q9BYE9 1310 aa29.38■■■□□ 2.29
HOXB3-201ENST00000311626 PRKAB2O43741 272 aa29.38■■■□□ 2.29
HOXB3-201ENST00000311626 RANBP6O60518 1105 aaKnown RBP29.38■■■□□ 2.29
HOXB3-201ENST00000311626 RRP12Q5JTH9 1297 aaKnown RBP29.38■■■□□ 2.29
HOXB3-201ENST00000311626 TMC6Q7Z403 805 aa29.38■■■□□ 2.29
HOXB3-201ENST00000311626 MAGEB6Q8N7X4 407 aa29.38■■■□□ 2.29
HOXB3-201ENST00000311626 STRBPQ96SI9 672 aaKnown RBP29.38■■■□□ 2.29
HOXB3-201ENST00000311626 ZNF335Q9H4Z2 1342 aaPredicted RBP29.38■■■□□ 2.29
HOXB3-201ENST00000311626 LMOD1P29536 600 aaPredicted RBP29.37■■■□□ 2.29
HOXB3-201ENST00000311626 SPECC1Q5M775 1068 aa29.37■■■□□ 2.29
HOXB3-201ENST00000311626 EPB41L4AQ9HCS5 686 aaPredicted RBP29.37■■■□□ 2.29
HOXB3-201ENST00000311626 TCRBV5S4A2TA0A5A2 114 aa29.37■■■□□ 2.29
HOXB3-201ENST00000311626 TMEM67Q5HYA8 995 aa29.37■■■□□ 2.29
HOXB3-201ENST00000311626 XIRP1Q702N8 1843 aaKnown RBP29.37■■■□□ 2.29
HOXB3-201ENST00000311626 MBD4O95243 580 aa29.36■■■□□ 2.29
HOXB3-201ENST00000311626 SLC39A14Q15043 492 aa29.36■■■□□ 2.29
HOXB3-201ENST00000311626 DZIP3Q86Y13 1208 aaKnown RBP29.36■■■□□ 2.29
HOXB3-201ENST00000311626 CCDC112Q8NEF3 446 aa29.36■■■□□ 2.29
HOXB3-201ENST00000311626 IGDCC4Q8TDY8 1250 aa29.36■■■□□ 2.29
HOXB3-201ENST00000311626 SEC31BQ9NQW1 1179 aa29.36■■■□□ 2.29
HOXB3-201ENST00000311626 NOL12Q9UGY1 213 aaKnown RBP eCLIP29.36■■■□□ 2.29
HOXB3-201ENST00000311626 V9GYY5 206 aaPredicted RBP29.36■■■□□ 2.29
HOXB3-201ENST00000311626 ZBTB43O43298 467 aa29.36■■■□□ 2.29
HOXB3-201ENST00000311626 TTF1Q15361 905 aaPredicted RBP29.36■■■□□ 2.29
HOXB3-201ENST00000311626 SHC4Q6S5L8 630 aa29.36■■■□□ 2.29
HOXB3-201ENST00000311626 CMTR1Q8N1G2 835 aaKnown RBP29.36■■■□□ 2.29
HOXB3-201ENST00000311626 ANKRD7Q92527 254 aa29.36■■■□□ 2.29
HOXB3-201ENST00000311626 TOMM22Q9NS69 142 aa29.36■■■□□ 2.29
HOXB3-201ENST00000311626 FAM217BQ9NTX9 383 aaPredicted RBP29.36■■■□□ 2.29
HOXB3-201ENST00000311626 MYH7P12883 1935 aa29.36■■■□□ 2.29
HOXB3-201ENST00000311626 GOLGA8AA7E2F4 631 aa29.35■■■□□ 2.29
HOXB3-201ENST00000311626 CMA1P23946 247 aa29.35■■■□□ 2.29
HOXB3-201ENST00000311626 RBM6P78332 1123 aaKnown RBP29.35■■■□□ 2.29
HOXB3-201ENST00000311626 UBE3CQ15386 1083 aa29.35■■■□□ 2.29
HOXB3-201ENST00000311626 SLC26A6Q9BXS9 759 aa29.35■■■□□ 2.29
HOXB3-201ENST00000311626 ZSWIM5Q9P217 1185 aa29.35■■■□□ 2.29
HOXB3-201ENST00000311626 PDE8AO60658 829 aa29.35■■■□□ 2.29
HOXB3-201ENST00000311626 ATP1A3P13637 1013 aa29.35■■■□□ 2.29
HOXB3-201ENST00000311626 NLRP12P59046 1061 aa29.35■■■□□ 2.29
HOXB3-201ENST00000311626 PNOCQ13519 176 aa29.35■■■□□ 2.29
HOXB3-201ENST00000311626 LY9Q9HBG7 655 aa29.35■■■□□ 2.29
HOXB3-201ENST00000311626 SYKP43405 635 aa29.34■■■□□ 2.29
HOXB3-201ENST00000311626 GUCY1A2P33402 732 aa29.34■■■□□ 2.29
HOXB3-201ENST00000311626 IARSP41252 1262 aaKnown RBP29.33■■■□□ 2.29
HOXB3-201ENST00000311626 RASGRF1Q13972 1273 aa29.33■■■□□ 2.29
HOXB3-201ENST00000311626 NCAPHQ15003 741 aa29.33■■■□□ 2.29
HOXB3-201ENST00000311626 PTPN14Q15678 1187 aa29.33■■■□□ 2.29
HOXB3-201ENST00000311626 IFIT3O14879 490 aaKnown RBP29.33■■■□□ 2.29
HOXB3-201ENST00000311626 IFNL3Q8IZI9 196 aa29.33■■■□□ 2.29
HOXB3-201ENST00000311626 SPATA5Q8NB90 893 aa29.33■■■□□ 2.29
HOXB3-201ENST00000311626 IQSEC3Q9UPP2 1182 aaPredicted RBP29.33■■■□□ 2.29
HOXB3-201ENST00000311626 C4AP0C0L4 1744 aa29.32■■■□□ 2.28
HOXB3-201ENST00000311626 C4BP0C0L5 1744 aa29.32■■■□□ 2.28
HOXB3-201ENST00000311626 NTRK3Q16288 839 aa29.32■■■□□ 2.28
HOXB3-201ENST00000311626 NAPBQ9H115 298 aa29.32■■■□□ 2.28
HOXB3-201ENST00000311626 ABCC12Q96J65 1359 aa29.32■■■□□ 2.28
HOXB3-201ENST00000311626 ARMCX5Q6P1M9 558 aa29.32■■■□□ 2.28
HOXB3-201ENST00000311626 ARID4AP29374 1257 aaPredicted RBP29.31■■■□□ 2.28
HOXB3-201ENST00000311626 PTPAQ15257 358 aa29.31■■■□□ 2.28
HOXB3-201ENST00000311626 PUM3Q15397 648 aaKnown RBP29.31■■■□□ 2.28
HOXB3-201ENST00000311626 CCAR2Q8N163 923 aaKnown RBP29.31■■■□□ 2.28
HOXB3-201ENST00000311626 WDR19Q8NEZ3 1342 aa29.31■■■□□ 2.28
HOXB3-201ENST00000311626 HSP90AA4PQ58FG1 418 aa29.31■■■□□ 2.28
HOXB3-201ENST00000311626 MIGA1Q8NAN2 632 aa29.31■■■□□ 2.28
HOXB3-201ENST00000311626 KCNJ14Q9UNX9 436 aa29.31■■■□□ 2.28
HOXB3-201ENST00000311626 FOXN1O15353 648 aa29.3■■■□□ 2.28
HOXB3-201ENST00000311626 LPIN2Q92539 896 aa29.3■■■□□ 2.28
HOXB3-201ENST00000311626 NEMFO60524 1076 aa29.3■■■□□ 2.28
HOXB3-201ENST00000311626 BCAMP50895 628 aa29.3■■■□□ 2.28
HOXB3-201ENST00000311626 SUSD4Q5VX71 490 aa29.3■■■□□ 2.28
HOXB3-201ENST00000311626 MAP3K14Q99558 947 aa29.3■■■□□ 2.28
HOXB3-201ENST00000311626 PAXBP1Q9Y5B6 917 aa29.3■■■□□ 2.28
HOXB3-201ENST00000311626 SMIM22K7EJ46 135 aa29.29■■■□□ 2.28
HOXB3-201ENST00000311626 GOLGA8FQ08AF8 430 aa29.29■■■□□ 2.28
HOXB3-201ENST00000311626 GOLGA8DPQ0D2H9 430 aa29.29■■■□□ 2.28
HOXB3-201ENST00000311626 DPF2Q92785 391 aa29.29■■■□□ 2.28
HOXB3-201ENST00000311626 ZNF512BQ96KM6 892 aaPredicted RBP29.29■■■□□ 2.28
HOXB3-201ENST00000311626 SLC12A7Q9Y666 1083 aa29.29■■■□□ 2.28
HOXB3-201ENST00000311626 NYAP1Q6ZVC0 841 aa29.29■■■□□ 2.28
HOXB3-201ENST00000311626 CDKL5O76039 1030 aa29.28■■■□□ 2.28
HOXB3-201ENST00000311626 FGFR2P21802 821 aa29.28■■■□□ 2.28
HOXB3-201ENST00000311626 CPLX2Q6PUV4 134 aaKnown RBP29.28■■■□□ 2.28
HOXB3-201ENST00000311626 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.28■■■□□ 2.28
HOXB3-201ENST00000311626 PATL2C9JE40 543 aaKnown RBP29.28■■■□□ 2.28
HOXB3-201ENST00000311626 UQCRFS1P1P0C7P4 283 aa29.28■■■□□ 2.28
HOXB3-201ENST00000311626 ATP2B1P20020 1258 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms