RNA–Protein interactions for RNA: ENST00000309828.4

EIF3F-201, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3F, Length 1,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-201ENST00000309828 MROH7-TTC4A0A0A0MT08 1334 aa16.73■□□□□ 0.27
EIF3F-201ENST00000309828 C21orf2O43822 256 aa16.73■□□□□ 0.27
EIF3F-201ENST00000309828 TDO2P48775 406 aa16.73■□□□□ 0.27
EIF3F-201ENST00000309828 GTF2IP78347 998 aa16.73■□□□□ 0.27
EIF3F-201ENST00000309828 EXOSC10Q01780 885 aaKnown RBP16.73■□□□□ 0.27
EIF3F-201ENST00000309828 FBXL16Q8N461 479 aa16.73■□□□□ 0.27
EIF3F-201ENST00000309828 NCOA7Q8NI08 942 aa16.73■□□□□ 0.27
EIF3F-201ENST00000309828 ATP8A2Q9NTI2 1148 aa16.73■□□□□ 0.27
EIF3F-201ENST00000309828 PRKAB2O43741 272 aa16.72■□□□□ 0.27
EIF3F-201ENST00000309828 HAND2P61296 217 aa16.72■□□□□ 0.27
EIF3F-201ENST00000309828 DYNLL1P63167 89 aaKnown RBP16.72■□□□□ 0.27
EIF3F-201ENST00000309828 TRDNQ13061 729 aa16.72■□□□□ 0.27
EIF3F-201ENST00000309828 DOK7Q18PE1 504 aa16.72■□□□□ 0.27
EIF3F-201ENST00000309828 RALYLQ86SE5 291 aaKnown RBP16.72■□□□□ 0.27
EIF3F-201ENST00000309828 SPRYD3Q8NCJ5 442 aa16.72■□□□□ 0.27
EIF3F-201ENST00000309828 AATFQ9NY61 560 aaKnown RBP eCLIP16.72■□□□□ 0.27
EIF3F-201ENST00000309828 ZNF219Q9P2Y4 722 aaPredicted RBP16.72■□□□□ 0.27
EIF3F-201ENST00000309828 ANAPC4Q9UJX5 808 aa16.72■□□□□ 0.27
EIF3F-201ENST00000309828 GAKO14976 1311 aa16.71■□□□□ 0.27
EIF3F-201ENST00000309828 PLCG2P16885 1265 aa16.71■□□□□ 0.27
EIF3F-201ENST00000309828 STRIP1Q5VSL9 837 aa16.71■□□□□ 0.27
EIF3F-201ENST00000309828 AGXT2Q9BYV1 514 aa16.71■□□□□ 0.27
EIF3F-201ENST00000309828 RNF41Q9H4P4 317 aaPredicted RBP16.71■□□□□ 0.27
EIF3F-201ENST00000309828 CNNM2Q9H8M5 875 aa16.71■□□□□ 0.27
EIF3F-201ENST00000309828 GPR75-ASB3A0A0A6YYF3 556 aa16.7■□□□□ 0.26
EIF3F-201ENST00000309828 ECE2O60344 883 aa16.7■□□□□ 0.26
EIF3F-201ENST00000309828 PCP11498 1178 aaKnown RBP16.7■□□□□ 0.26
EIF3F-201ENST00000309828 MCM5P33992 734 aa16.7■□□□□ 0.26
EIF3F-201ENST00000309828 TOB2Q14106 344 aaPredicted RBP16.7■□□□□ 0.26
EIF3F-201ENST00000309828 GRIK5Q16478 980 aa16.7■□□□□ 0.26
EIF3F-201ENST00000309828 DALRD3Q5D0E6 543 aaKnown RBP16.7■□□□□ 0.26
EIF3F-201ENST00000309828 Q6ZUG5 572 aa16.7■□□□□ 0.26
EIF3F-201ENST00000309828 MB21D2Q8IYB1 491 aaPredicted RBP16.7■□□□□ 0.26
EIF3F-201ENST00000309828 STAG1Q8WVM7 1258 aa16.7■□□□□ 0.26
EIF3F-201ENST00000309828 KRT23Q9C075 422 aa16.7■□□□□ 0.26
EIF3F-201ENST00000309828 NBPF3Q9H094 633 aa16.7■□□□□ 0.26
EIF3F-201ENST00000309828 PTGER2P43116 358 aa16.69■□□□□ 0.26
EIF3F-201ENST00000309828 NT5C2P49902 561 aa16.69■□□□□ 0.26
EIF3F-201ENST00000309828 PPARAQ07869 468 aa16.69■□□□□ 0.26
EIF3F-201ENST00000309828 SBK1Q52WX2 424 aa16.69■□□□□ 0.26
EIF3F-201ENST00000309828 AKNAD1Q5T1N1 836 aa16.69■□□□□ 0.26
EIF3F-201ENST00000309828 NOL8Q76FK4 1167 aaKnown RBP16.69■□□□□ 0.26
EIF3F-201ENST00000309828 TBC1D10CQ8IV04 446 aa16.69■□□□□ 0.26
EIF3F-201ENST00000309828 SDR42E1Q8WUS8 393 aa16.69■□□□□ 0.26
EIF3F-201ENST00000309828 FBXW7Q969H0 707 aa16.69■□□□□ 0.26
EIF3F-201ENST00000309828 CHMP4CQ96CF2 233 aa16.69■□□□□ 0.26
EIF3F-201ENST00000309828 MRIQ9BWK5 157 aa16.69■□□□□ 0.26
EIF3F-201ENST00000309828 DBNDD1Q9H9R9 158 aa16.69■□□□□ 0.26
EIF3F-201ENST00000309828 ARPP21Q9UBL0 812 aaPredicted RBP16.69■□□□□ 0.26
EIF3F-201ENST00000309828 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.69■□□□□ 0.26
EIF3F-201ENST00000309828 USP17L3A6NCW0 530 aa16.68■□□□□ 0.26
EIF3F-201ENST00000309828 USP17L4A6NCW7 530 aa16.68■□□□□ 0.26
EIF3F-201ENST00000309828 PPIP5K2O43314 1243 aa16.68■□□□□ 0.26
EIF3F-201ENST00000309828 FGD1P98174 961 aa16.68■□□□□ 0.26
EIF3F-201ENST00000309828 DIXDC1Q155Q3 683 aa16.68■□□□□ 0.26
EIF3F-201ENST00000309828 AOC3Q16853 763 aa16.68■□□□□ 0.26
EIF3F-201ENST00000309828 MFSD6Q6ZSS7 791 aa16.68■□□□□ 0.26
EIF3F-201ENST00000309828 USP17L1Q7RTZ2 530 aa16.68■□□□□ 0.26
EIF3F-201ENST00000309828 MTA3Q9BTC8 594 aa16.68■□□□□ 0.26
EIF3F-201ENST00000309828 DCP1AQ9NPI6 582 aaPredicted RBP16.68■□□□□ 0.26
EIF3F-201ENST00000309828 TPCN1Q9ULQ1 816 aa16.68■□□□□ 0.26
EIF3F-201ENST00000309828 CHD4Q14839 1912 aa16.68■□□□□ 0.26
EIF3F-201ENST00000309828 BRCA1P38398 1863 aaKnown RBP16.67■□□□□ 0.26
EIF3F-201ENST00000309828 BTDP43251 543 aa16.67■□□□□ 0.26
EIF3F-201ENST00000309828 HDLBPQ00341 1268 aaKnown RBP16.67■□□□□ 0.26
EIF3F-201ENST00000309828 DACT2Q5SW24 774 aa16.67■□□□□ 0.26
EIF3F-201ENST00000309828 HHIPL2Q6UWX4 724 aa16.67■□□□□ 0.26
EIF3F-201ENST00000309828 CERS5Q8N5B7 392 aa16.67■□□□□ 0.26
EIF3F-201ENST00000309828 TCEANC2Q96MN5 208 aa16.67■□□□□ 0.26
EIF3F-201ENST00000309828 FOXD4L1Q9NU39 408 aa16.67■□□□□ 0.26
EIF3F-201ENST00000309828 MYH2Q9UKX2 1941 aa16.66■□□□□ 0.26
EIF3F-201ENST00000309828 PRC1O43663 620 aa16.66■□□□□ 0.26
EIF3F-201ENST00000309828 SLC3A2P08195 630 aaKnown RBP16.66■□□□□ 0.26
EIF3F-201ENST00000309828 USP5P45974 858 aa16.66■□□□□ 0.26
EIF3F-201ENST00000309828 EVCP57679 992 aa16.66■□□□□ 0.26
EIF3F-201ENST00000309828 NUCB2P80303 420 aa16.66■□□□□ 0.26
EIF3F-201ENST00000309828 COL9A3Q14050 684 aaPredicted RBP16.66■□□□□ 0.26
EIF3F-201ENST00000309828 ME3Q16798 604 aa16.66■□□□□ 0.26
EIF3F-201ENST00000309828 CTR9Q6PD62 1173 aa16.66■□□□□ 0.26
EIF3F-201ENST00000309828 AMOTL1Q8IY63 956 aa16.66■□□□□ 0.26
EIF3F-201ENST00000309828 TMEM87BQ96K49 555 aa16.66■□□□□ 0.26
EIF3F-201ENST00000309828 TTF2Q9UNY4 1162 aaKnown RBP16.66■□□□□ 0.26
EIF3F-201ENST00000309828 FGRP09769 529 aa16.65■□□□□ 0.26
EIF3F-201ENST00000309828 CTDSPL2Q05D32 466 aa16.65■□□□□ 0.26
EIF3F-201ENST00000309828 SH3RF3Q8TEJ3 882 aaPredicted RBP16.65■□□□□ 0.26
EIF3F-201ENST00000309828 BRF1Q92994 677 aa16.65■□□□□ 0.26
EIF3F-201ENST00000309828 TEKT1Q969V4 418 aa16.65■□□□□ 0.26
EIF3F-201ENST00000309828 ZNF274Q96GC6 653 aaPredicted RBP16.65■□□□□ 0.26
EIF3F-201ENST00000309828 SPON1Q9HCB6 807 aa16.65■□□□□ 0.26
EIF3F-201ENST00000309828 MKRN1Q9UHC7 482 aaKnown RBP16.65■□□□□ 0.26
EIF3F-201ENST00000309828 DAGLAQ9Y4D2 1042 aa16.65■□□□□ 0.26
EIF3F-201ENST00000309828 ZNF646O15015 1829 aaPredicted RBP16.65■□□□□ 0.26
EIF3F-201ENST00000309828 MYO3BQ8WXR4 1341 aa16.65■□□□□ 0.26
EIF3F-201ENST00000309828 LAMB1P07942 1786 aa16.64■□□□□ 0.25
EIF3F-201ENST00000309828 MINDY4BA8MYZ0 360 aa16.64■□□□□ 0.25
EIF3F-201ENST00000309828 USP17L12C9JPN9 530 aa16.64■□□□□ 0.25
EIF3F-201ENST00000309828 USP17L21D6R901 530 aa16.64■□□□□ 0.25
EIF3F-201ENST00000309828 LARGE1O95461 756 aa16.64■□□□□ 0.25
EIF3F-201ENST00000309828 ANTXR2P58335 489 aa16.64■□□□□ 0.25
EIF3F-201ENST00000309828 LARGE2Q8N3Y3 721 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms