RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 YIPF3Q9GZM5 350 aa17.24■□□□□ 0.35
LEMD3-201ENST00000308330 NPC1L1Q9UHC9 1359 aa17.24■□□□□ 0.35
LEMD3-201ENST00000308330 TSNAXIP1Q2TAA8 658 aa17.24■□□□□ 0.35
LEMD3-201ENST00000308330 ZNF772Q68DY9 489 aaPredicted RBP17.24■□□□□ 0.35
LEMD3-201ENST00000308330 GBP7Q8N8V2 638 aaPredicted RBP17.24■□□□□ 0.35
LEMD3-201ENST00000308330 PLBD2Q8NHP8 589 aa17.24■□□□□ 0.35
LEMD3-201ENST00000308330 ETAA1Q9NY74 926 aa17.24■□□□□ 0.35
LEMD3-201ENST00000308330 GOLGA6CA6NDK9 693 aa17.23■□□□□ 0.35
LEMD3-201ENST00000308330 ERVV-2B6SEH9 535 aa17.23■□□□□ 0.35
LEMD3-201ENST00000308330 ANKRD65E5RJM6 399 aa17.23■□□□□ 0.35
LEMD3-201ENST00000308330 GOLGA6DP0CG33 693 aa17.23■□□□□ 0.35
LEMD3-201ENST00000308330 VCX3BQ9H321 246 aa17.23■□□□□ 0.35
LEMD3-201ENST00000308330 VCX3AQ9NNX9 186 aa17.23■□□□□ 0.35
LEMD3-201ENST00000308330 GOLGA6AQ9NYA3 693 aa17.23■□□□□ 0.35
LEMD3-201ENST00000308330 SEC63Q9UGP8 760 aaKnown RBP17.23■□□□□ 0.35
LEMD3-201ENST00000308330 TSPY2A6NKD2 308 aa17.23■□□□□ 0.35
LEMD3-201ENST00000308330 ME1P48163 572 aa17.23■□□□□ 0.35
LEMD3-201ENST00000308330 CCT5P48643 541 aa17.23■□□□□ 0.35
LEMD3-201ENST00000308330 GRM1Q13255 1194 aa17.23■□□□□ 0.35
LEMD3-201ENST00000308330 BRINP3Q76B58 766 aa17.23■□□□□ 0.35
LEMD3-201ENST00000308330 ZNF804AQ7Z570 1209 aa17.23■□□□□ 0.35
LEMD3-201ENST00000308330 GBP5Q96PP8 586 aa17.23■□□□□ 0.35
LEMD3-201ENST00000308330 GCFC2P16383 781 aaKnown RBP17.23■□□□□ 0.35
LEMD3-201ENST00000308330 RMDN2Q96LZ7 410 aa17.23■□□□□ 0.35
LEMD3-201ENST00000308330 BABAM1Q9NWV8 329 aa17.23■□□□□ 0.35
LEMD3-201ENST00000308330 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.23■□□□□ 0.355e-7■■■■■ 30.9
LEMD3-201ENST00000308330 CETN3O15182 167 aa17.23■□□□□ 0.35
LEMD3-201ENST00000308330 CCDC40Q4G0X9 1142 aa17.23■□□□□ 0.35
LEMD3-201ENST00000308330 MUM1L1Q5H9M0 696 aa17.23■□□□□ 0.35
LEMD3-201ENST00000308330 CRNKL1Q9BZJ0 848 aaKnown RBP17.23■□□□□ 0.35
LEMD3-201ENST00000308330 PSMC4P43686 418 aa17.22■□□□□ 0.35
LEMD3-201ENST00000308330 ATP11AP98196 1134 aa17.22■□□□□ 0.35
LEMD3-201ENST00000308330 ZGPATQ8N5A5 531 aaKnown RBP17.22■□□□□ 0.35
LEMD3-201ENST00000308330 PHKG2P15735 406 aa17.22■□□□□ 0.35
LEMD3-201ENST00000308330 SPECC1Q5M775 1068 aa17.22■□□□□ 0.35
LEMD3-201ENST00000308330 NAA16Q6N069 864 aaPredicted RBP17.22■□□□□ 0.35
LEMD3-201ENST00000308330 EYA3Q99504 573 aa17.22■□□□□ 0.35
LEMD3-201ENST00000308330 TNNQ9UQP3 1299 aa17.22■□□□□ 0.35
LEMD3-201ENST00000308330 GSTO1P78417 241 aa17.22■□□□□ 0.35
LEMD3-201ENST00000308330 FBXO38Q6PIJ6 1188 aa17.22■□□□□ 0.35
LEMD3-201ENST00000308330 SDCCAG8Q86SQ7 713 aaPredicted RBP17.22■□□□□ 0.35
LEMD3-201ENST00000308330 ARFGAP2Q8N6H7 521 aa17.22■□□□□ 0.35
LEMD3-201ENST00000308330 ATG3Q9NT62 314 aa17.22■□□□□ 0.35
LEMD3-201ENST00000308330 PCDHB15Q9Y5E8 787 aa17.22■□□□□ 0.35
LEMD3-201ENST00000308330 PRR36Q9H6K5 1346 aa17.22■□□□□ 0.35
LEMD3-201ENST00000308330 ABCD1P33897 745 aa17.21■□□□□ 0.35
LEMD3-201ENST00000308330 PDE4BQ07343 736 aa17.21■□□□□ 0.35
LEMD3-201ENST00000308330 MAATS1Q7Z4T9 603 aa17.21■□□□□ 0.35
LEMD3-201ENST00000308330 BCAS4Q8TDM0 211 aa17.21■□□□□ 0.35
LEMD3-201ENST00000308330 PAIP2BQ9ULR5 123 aaKnown RBP17.21■□□□□ 0.35
LEMD3-201ENST00000308330 STX8Q9UNK0 236 aa17.21■□□□□ 0.35
LEMD3-201ENST00000308330 JAG2Q9Y219 1238 aa17.21■□□□□ 0.35
LEMD3-201ENST00000308330 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.21■□□□□ 0.35
LEMD3-201ENST00000308330 CPLX4Q7Z7G2 160 aa17.21■□□□□ 0.35
LEMD3-201ENST00000308330 BIN2Q9UBW5 565 aaPredicted RBP17.21■□□□□ 0.35
LEMD3-201ENST00000308330 HOXB7P09629 217 aa17.21■□□□□ 0.35
LEMD3-201ENST00000308330 ANO6Q4KMQ2 910 aa17.21■□□□□ 0.35
LEMD3-201ENST00000308330 SLC9C2Q5TAH2 1124 aa17.21■□□□□ 0.35
LEMD3-201ENST00000308330 GPR161Q8N6U8 529 aaKnown RBP17.21■□□□□ 0.35
LEMD3-201ENST00000308330 IGHDP01880 384 aa17.21■□□□□ 0.35
LEMD3-201ENST00000308330 RHOXF2BP0C7M4 288 aa17.21■□□□□ 0.35
LEMD3-201ENST00000308330 WASF1Q92558 559 aa17.21■□□□□ 0.35
LEMD3-201ENST00000308330 RHOXF2Q9BQY4 288 aa17.21■□□□□ 0.35
LEMD3-201ENST00000308330 PNMA6AP0CW24 399 aaPredicted RBP17.2■□□□□ 0.34
LEMD3-201ENST00000308330 USP48Q86UV5 1035 aa17.2■□□□□ 0.34
LEMD3-201ENST00000308330 SLC12A7Q9Y666 1083 aa17.2■□□□□ 0.34
LEMD3-201ENST00000308330 ENO4A6NNW6 628 aa17.2■□□□□ 0.34
LEMD3-201ENST00000308330 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.2■□□□□ 0.34
LEMD3-201ENST00000308330 SOS1Q07889 1333 aaPredicted RBP17.2■□□□□ 0.34
LEMD3-201ENST00000308330 PPFIA4O75335 1185 aa17.2■□□□□ 0.34
LEMD3-201ENST00000308330 POLE2P56282 527 aa17.2■□□□□ 0.34
LEMD3-201ENST00000308330 TRIM37O94972 964 aa17.2■□□□□ 0.34
LEMD3-201ENST00000308330 PRR29P0C7W0 189 aa17.2■□□□□ 0.34
LEMD3-201ENST00000308330 NUCB1Q02818 461 aa17.2■□□□□ 0.34
LEMD3-201ENST00000308330 IFFO1Q0D2I5 559 aa17.2■□□□□ 0.34
LEMD3-201ENST00000308330 ACBD5Q5T8D3 534 aaPredicted RBP17.2■□□□□ 0.34
LEMD3-201ENST00000308330 CNNM3Q8NE01 707 aa17.2■□□□□ 0.34
LEMD3-201ENST00000308330 IL17REQ8NFR9 667 aa17.2■□□□□ 0.34
LEMD3-201ENST00000308330 METTL22Q9BUU2 404 aaPredicted RBP17.2■□□□□ 0.34
LEMD3-201ENST00000308330 IBTKQ9P2D0 1353 aaPredicted RBP17.2■□□□□ 0.34
LEMD3-201ENST00000308330 PPFIBP2Q8ND30 876 aa17.19■□□□□ 0.34
LEMD3-201ENST00000308330 ANKRD2Q9GZV1 360 aa17.19■□□□□ 0.34
LEMD3-201ENST00000308330 SCAND2PQ9GZW5 306 aaPredicted RBP17.19■□□□□ 0.34
LEMD3-201ENST00000308330 BSDC1Q9NW68 430 aaPredicted RBP17.19■□□□□ 0.34
LEMD3-201ENST00000308330 SBNO2Q9Y2G9 1366 aa17.19■□□□□ 0.34
LEMD3-201ENST00000308330 CHMP4BP1P59074 171 aa17.19■□□□□ 0.34
LEMD3-201ENST00000308330 CAPRIN2Q6IMN6 1127 aaKnown RBP17.19■□□□□ 0.34
LEMD3-201ENST00000308330 USP16Q9Y5T5 823 aa17.19■□□□□ 0.34
LEMD3-201ENST00000308330 ECM2O94769 699 aaPredicted RBP17.19■□□□□ 0.34
LEMD3-201ENST00000308330 EPS15P42566 896 aa17.19■□□□□ 0.34
LEMD3-201ENST00000308330 BRD3Q15059 726 aa17.19■□□□□ 0.34
LEMD3-201ENST00000308330 ABTB1Q969K4 478 aaPredicted RBP17.19■□□□□ 0.34
LEMD3-201ENST00000308330 RBM17Q96I25 401 aaKnown RBP17.19■□□□□ 0.34
LEMD3-201ENST00000308330 INSRP06213 1382 aa17.19■□□□□ 0.34
LEMD3-201ENST00000308330 SNUPNO95149 360 aaKnown RBP17.19■□□□□ 0.34
LEMD3-201ENST00000308330 PICALMQ13492 652 aa17.19■□□□□ 0.34
LEMD3-201ENST00000308330 STX1AQ16623 288 aa17.19■□□□□ 0.34
LEMD3-201ENST00000308330 MFSD6Q6ZSS7 791 aa17.19■□□□□ 0.34
LEMD3-201ENST00000308330 BICC1Q9H694 974 aaKnown RBP17.19■□□□□ 0.34
LEMD3-201ENST00000308330 TRIM35Q9UPQ4 493 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms